Notothenia coriiceps (black rockcod): 104960911
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Entry
104960911 CDS
T04920
Symbol
atg2b
Name
(RefSeq) autophagy-related protein 2 homolog B isoform X1
KO
K17906
autophagy-related protein 2
Organism
ncc
Notothenia coriiceps (black rockcod)
Pathway
ncc04136
Autophagy - other
ncc04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
ncc00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
104960911 (atg2b)
04136 Autophagy - other
104960911 (atg2b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ncc04131
]
104960911 (atg2b)
03029 Mitochondrial biogenesis [BR:
ncc03029
]
104960911 (atg2b)
Membrane trafficking [BR:
ncc04131
]
Autophagy
Autophagosome formation proteins
Atg18-Atg2 complex
104960911 (atg2b)
Mitochondrial biogenesis [BR:
ncc03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
104960911 (atg2b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ATG2_CAD
VPS13_N
Motif
Other DBs
NCBI-GeneID:
104960911
NCBI-ProteinID:
XP_010787389
UniProt:
A0A6I9P9M6
LinkDB
All DBs
Position
Unknown
AA seq
2079 aa
AA seq
DB search
MPWPFSESIKKRACRYLLHRYLGNFLQEKLSLDQLSLDLYQGTGTLAQVPLDKWSLNELL
ETADAPFEVIAGFIQTISLTVPWAALLHENCALEIKGLEMVLRPRPRVASGTEPMYWSSF
MTSSMQLAKECLSQKLTDDMGESFQPFEGLEKFAETIETVLRRVKVTFLDTVLRVEHIPE
NSKTGIALEIRIKKIVYCDETDEESSSVNVHQPTTFAHKNLQMEDMTVFWDEFSDVSRAG
CKSSPTPTENDPKLSPSWNPKIICEPHPQFTEPVSSTTPFEPVQVGSLCGQIELSLTLKN
NMAMPGAKLDVVGHIDTLIILLSPRQVHLLLDLCGAFSGGGAQEWAKDRKSRPIQQEDEY
RLHMELNRCLKKDTAGPGTDADLFESQTTRTVSSRDDVFFSMADMDMSHSLSSLPPLGEP
PTVDLDLSLNSNYSASPGESPSGNATALWDDYMDVPRQREKHTNESPAQRDSHFPQKLLR
QTSHPTKTHGDESRPELVLRLTLSSLAVAVLHIDPLPPPDASPSPLGPMAAQFFNMVGPG
RLAPAAFLQSRTVFNQACPHDHLRFVGQGLKISYEHCQGSSLRTFSTDVSLNRMEFLECL
FPSEAAIGGSQRGIQYTELLTFDTPDAAAPLTSCLHLLYKQAERRGPQGGQVRLSTIPRK
AEIQVELGPVRCELDISIVDRLNSLLQPQKLATTELMASHMYTSYNKHVSLHKAFTEVFL
DDSHTPTNCHVSLTVNAPLLGLAIRFPIPDLRSDQERGPWFKKSLQKEVLYLELEDLEMK
TEFMGGSSPDQTKMELTFRELTGKFQEEPDQPAVRFFRVSHTMDGDMTTSESVKFDWPRV
VLKMNPTAVHSILERVTAEDDEGAEDHSLEEEEEEGAAHSLKDVCDFGKPEPSPFSSRRV
MYENEEMVIPGDVAEMTDFQEKTMNNSRFILDLCFPNVQLVLPSKAFYEKLHNRINNDLL
LWEPTAPSPVETVESMPYGVGLSVASQLINTYSKDSFSQFRSTGPEDETSGSDEETMHYY
CPASDLGLRSRKKKKPKAQSKTSQSLFSVIISVNHGLVALQTNAKKEDKTILKNKHGEFW
LEVKNAVLFSVTQYEGYKDQHYLCFHTSNICMYHQGLVDGGAPGSDVKLPCRTHPHWLEP
TIYQSETSPERASTPSECIGLEARSMLSVAVKISSQNAERNVKEFLVAVGVRGATLQHRV
VPPSLGWYDQMVDFLNVSDEPVLGYAPPTSVTTLHLHLWSCSLDYSFFLDRPLYLPIRSL
LVVETFSISSSVSLDHSSSTLRIILDEAALFLSDKSNAVSVNLARDYVQVVDMGTLELRI
TAVKPGVDGKLLEPRFELRCSSDVIHIRTCSDSCAALMNLIQYVASYGDLLPPAEPEAKQ
SSTTQRAKVERTSRPTSQTLLLAETEQQMLQDLMSEAMEETDGQQAPGLQQNGACEEPNQ
DHDPPRSDLFLFPDESGNCIQDSSPTYPMLHSPLITPVPNLAQETDDFCILETPGSRGQD
LDQEPVVKLLTSDPVEIKDDYFSQPLDGSDSSRGAMNFPTPEVRYLVKEISVIWHLYGGK
DFGGATFTPSPARSRGTTPHCSPSQTPVRQAKASGRAGGGRGRNADVLMEIQLSKVRFQH
EVYPQAQVASGPAVDQPVSRQVFVVQDLEIRDRLATSQMNKFLYLYSSKEMPRKAHSNML
TVKALHMCPESGQAPQECCLRVSLMPLRLNIDQDALFFLKDFFTSLATEVEFFSPPAQEA
VCVTTKKASAPEISCSFSKQAGSSQDPAPIISVPAQRRMSHNGYPTCGREEVTDDEASTP
SFTDQPIFFREFRFTSEVPIRLDYHGKHVAMEQGTFAGIIIGLTQLNCSELKLRRLCYRQ
GLLGVDKLFSYAINEWLNDIKKNQLPGLLGGVGPIHSLVQLVQGFRDLVWLPIEQYRKDG
RIVRGFQRGTASFGTSTAMAALELTNRMVRTIQAAAETAYDMVSPVPDERDTKRIKRFSH
YGLAHQPVDLREGVAKAYTVVKEGITDTALTIYDTATREHEQRGMTGAVGGVLRQLPPAV
VKPLIMATEATSNVLGGMRNQIHPDARQEESQKWRQGEE
NT seq
6240 nt
NT seq
+upstream
nt +downstream
nt
atgccttggccattttcggaatccatcaagaagcgggcctgcagataccttctgcatcgg
taccttggaaacttccttcaagagaaactgagtttggatcagctcagtttagacctctat
caaggcactggaacacttgcacaagtgccattggataaatggtcactcaatgagctccta
gagacagcagatgcaccttttgaggttattgcggggttcatccagacaatttctctaacg
gttccatgggctgccctactgcacgaaaactgtgccctggagatcaaaggtttggagatg
gtgctcagaccaaggccgagagtggcatctggcacagagcccatgtactggtccagtttc
atgacgagcagcatgcagcttgccaaagaatgtctcagccagaaactcacagatgatatg
ggagagagcttccagcctttcgagggattagagaagtttgcagaaacgatagagacagtt
ctgagaagagttaaggtgacatttttggatacagttctcagagtcgaacacattcccgaa
aattctaaaactggaatcgcccttgagattcgaataaaaaagattgtttactgcgatgaa
acagacgaggagagctccagtgtgaatgtgcatcagccaaccacatttgcacataaaaac
ttgcagatggaagacatgaccgtattttgggatgagttctcagatgtgtcccgtgctggt
tgtaaatcttcacccactccaacggaaaatgacccaaaactttcacctagctggaatccc
aaaataatatgtgagcctcatccccagtttacagagcctgtttcctccacaacacccttt
gaacctgtgcaggtcgggagcctctgtggtcaaattgagttgtccctcactctgaaaaac
aacatggctatgcctggagcaaagctggatgttgttggacatattgatacacttattatt
ctgctgtccccacggcaagttcatcttcttctggacctgtgtggagctttctctggtgga
ggtgcacaggaatgggccaaggatagaaagagccgaccaatacagcaagaggatgagtat
cgactccacatggagctgaaccgctgtctgaagaaggacactgctgggccagggacggac
gcagacctctttgagagccagaccaccagaactgtgtctagtcgagatgatgtgttcttc
tccatggcagacatggacatgtctcacagcttgtcatcccttcctcctctgggtgaaccc
cccaccgttgacttggatctgtccctcaatagcaactactctgcctcaccaggagaatct
ccttctggaaatgccacagctctgtgggatgattacatggatgtcccacgacaaagagaa
aagcacactaatgaaagtcccgcccaacgggattcccatttccctcaaaaactactgaga
cagacatcccatccaacgaaaacgcacggtgatgagtccaggccagagctggtgttgagg
ttaactctgagtagcctggctgtggccgtcctccacatcgacccgctgccccccccagat
gcttctcccagccccctcggccccatggcggcacagttcttcaacatggtgggcccgggc
cgtctcgctccagctgctttccttcagtctcggacagtgtttaaccaagcttgtccccat
gaccatctaaggtttgtgggccagggcctgaagatcagctatgagcactgtcaggggtcc
agtctgcggactttcagcacggacgtctccctgaaccggatggagttcctggagtgtctg
tttccctctgaggccgccattggtggctcccaacgaggcattcagtacactgagctgctg
acatttgacacccctgatgctgctgcgccgctcaccagctgcctccacctgctttacaaa
caggccgagcgcaggggccctcagggcggccaggttcgcctcagcaccattcctaggaaa
gcagagatccaggtggagctgggccccgtgcgctgtgagctggacatcagcatcgtagac
cgcctcaactccttgttacagcctcagaagctggccaccacagagctgatggcctcccac
atgtacacatcctataataaacatgtcagcttgcataaggcctttacagaggttttcctt
gatgacagccacactcccaccaactgtcatgtatcgctgacggtcaatgctcctttgctt
ggccttgcaatccgcttccccatccctgacctgcgctcagatcaggagaggggcccttgg
ttcaagaagtccctacagaaggaagtactctacctggagctggaagacctggaaatgaag
acggagttcatgggtggcagctctcctgaccaaaccaaaatggagctcactttcagggag
cttactgggaagtttcaggaggagccggatcaaccagctgttcggttcttcagggtgtcc
cacaccatggatggagacatgacgacatctgaaagtgtcaaatttgattggccgagggtt
gtcctaaagatgaaccccacagcagtccactctatccttgagcgggtgacggctgaagat
gacgagggggccgaggaccattcccttgaggaagaagaggaggaaggggctgcccattca
ctgaaggatgtctgtgactttgggaaaccagagccatcgcccttttcatcacgaagggtt
atgtatgagaatgaagagatggtcatccctggtgatgttgctgagatgacggatttccag
gagaaaaccatgaacaactctcgcttcatccttgacttgtgtttccccaatgtgcagtta
gtgctgcccagcaaggcattttatgagaaactacacaacaggataaacaatgacctgctg
ctgtgggagcccactgccccctctccagtggagacggtggaaagcatgccatatggagtg
gggctctctgtggccagtcagctgatcaacacctactccaaggacagcttcagccagttc
cgctccaccggccccgaagatgagaccagtgggtcagacgaggagaccatgcactattac
tgtcctgcctctgacctgggcctcaggtcccgcaagaagaagaaacccaaagcccaaagc
aagacatcccagagcctgttctctgtcatcatcagtgtcaaccacggcctggtggctctt
cagactaacgcaaagaaggaggataaaaccatactgaaaaacaaacatggcgagttctgg
ctggaggtgaagaatgctgtgctgttcagtgtgacgcagtacgaaggctataaagaccaa
cactacctctgcttccacaccagtaacatttgcatgtatcatcaaggacttgtggatgga
ggcgcgcctggctcagatgtcaagttgccatgcaggactcatccccactggttagagcca
accatctaccaatcagagacttcccctgagagagcctcgacaccctcagagtgtattggt
ctggaggctcgcagcatgctgtctgtcgctgttaaaatctcatcacagaatgcagagcgc
aatgtcaaggagttcctggttgctgttggagtgagaggagccacgctgcagcacagagtg
gtcccacccagcctgggctggtatgaccagatggtcgactttctgaatgtttccgatgag
cctgtgttgggttacgcccctccgacgtctgtcaccaccttacatttacacctgtggagc
tgctctctagactacagtttttttcttgacagacccctttacctgccaatcagatcactg
ttggttgtagaaacgttcagcatctccagcagtgtctctctagaccactcttcttcaacg
ctcaggatcattttggatgaagcagctttgttcctctcagacaagagtaacgctgtctcc
gtcaatctggcgcgcgattatgtccaagtggtagacatgggtactttggagctgaggatt
acagctgtcaaacctggagtggacggaaagttgctggagcccagatttgagctgcgctgt
tccagtgacgttattcacatcagaacgtgttcggactcctgcgccgccctcatgaacctc
attcagtatgtggcaagctacggagacttactgccccctgcagaaccagaagccaagcag
agcagcacaacacaaagagccaaggtggagcgtaccagccggcccacatctcagacactg
ttgctggcggagacagagcagcagatgttgcaggacctgatgagtgaagctatggaggag
accgacgggcagcaggcaccagggctgcagcagaatggtgcatgtgaggagccaaatcaa
gaccacgatccgcctcgctcagacctattcttgttcccggatgagagtgggaattgtatc
caagattcaagccccacttaccccatgcttcactcacctctcatcactcctgtccctaac
ttggcccaagagacggacgacttttgtatcctggagacacccgggtccagaggacaggat
cttgaccaggagccggtggtgaaacttcttacctcagatcctgtggaaatcaaagatgat
tacttcagtcagcctctagacgggagcgattccagccgcggggccatgaactttcccacc
cccgaggtgcgctacctcgtcaaagagatatctgtcatctggcacctgtatggcgggaaa
gactttggaggtgcaactttcacaccctctcctgcaagaagccgggggactacaccccat
tgctccccctctcaaactccagtcagacaggccaaggcttcaggacgggccggaggcgga
agaggaaggaacgccgacgtcctgatggagatacaactcagcaaagtgaggtttcagcat
gaggtgtacccacaggcccaggtggcttctgggccagcggtggatcagccagtctctcgg
caggtgtttgtcgtgcaggacttggagattcgagacagactggctacctcacagatgaac
aagttcctctatttgtattccagcaaagaaatgcctcgaaaagcccactctaacatgttg
acagtgaaggcgttgcacatgtgtccggagtcaggccaagctcctcaagagtgctgtttg
cgtgtttcactgatgcctcttcgcctcaacattgatcaggacgcactattcttcctcaag
gacttcttcaccagtcttgctactgaagtagagtttttctccccgcctgctcaagaagct
gtttgtgtgaccacaaagaaagcgtctgccccagagatctcctgcagcttctccaagcag
gcgggcagcagccaggacccggcccccatcatctcagtgcctgctcagagacgcatgagc
cacaacggttaccccacatgtggcagggaggaagtgactgacgacgaagcctccactcct
tccttcacagaccagccaatcttctttagggagtttcgatttacctctgaggttcccatt
cgcttggattaccatgggaaacatgtagcaatggagcagggaacatttgcagggatcatt
atcgggttgacgcagcttaattgttcagagctgaaactgcggcgcttgtgttatagacaa
ggattattaggtgtggataagctgttttcctatgcaataaacgagtggcttaatgacata
aagaagaatcagcttccaggactcctggggggtgtggggcccattcactctctggtccag
ctcgttcagggattcagggacttggtctggctcccgattgagcagtacaggaaagacggt
cggatagtccgtgggttccagcgcggcacggcctcctttggaacttccactgctatggcc
gctctggagctcaccaacaggatggtgcgcacaatccaggccgcagcagagacggcctat
gacatggtgtccccagtgcctgatgagagagacacgaagagaataaaacgcttctcccat
tacggactggctcatcagccagtggacctgagagaaggtgtagccaaagcctatactgtc
gtaaaagagggcatcacagacacagccctgaccatctatgacacagccacccgggagcat
gagcagcgcggcatgacgggggcagtggggggggttctccgccagctgcccccagctgtg
gtgaagcccctcatcatggccactgaagccacctccaatgtgttgggtggaatgaggaac
cagattcaccctgatgcacgccaggaggagtctcagaaatggaggcagggcgaggagtaa
DBGET
integrated database retrieval system
