Notothenia coriiceps (black rockcod): 104961229
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Entry
104961229 CDS
T04920
Name
(RefSeq) neuronal PAS domain-containing protein 4-like isoform X1
KO
K26457
neuronal PAS domain-containing protein 4
Organism
ncc
Notothenia coriiceps (black rockcod)
Brite
KEGG Orthology (KO) [BR:
ncc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ncc03000
]
104961229
Transcription factors [BR:
ncc03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
104961229
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
bHLH_NPAS4
PAS_3
PAS_11
PAS
PAS_9
PAS_2
HLH
Motif
Other DBs
NCBI-GeneID:
104961229
NCBI-ProteinID:
XP_010787785
UniProt:
A0A6I9PJH5
LinkDB
All DBs
Position
Unknown
AA seq
759 aa
AA seq
DB search
MTIWCNACRCHVTSPCTSHPQHADQRSSFCRRFRSTKGASKARRDQINHEIRNMRALLPI
TQEDQERLSYLHSMAAICAYIRKSVLLQGLPAGVRSHCSVPHEAFLPAMHGFILVTTAKG
SLVYVSQNASEYLGFSMIDVLQGDTLYDMVESSDIHVVKSNLDIDSNSSTERSFICCMQT
SKAFKLQQGSCCSMLVRGSFQSVPQPYPSSSSACPTSQPLFVALCTPTVDRLKSCDSSFC
QSFNSVHRLDMTFTQLSDSVLYFLGYSAEEMISRSWYSLIHPEDVFSSAACHKSLMQADE
GFQVEVVLRLQCKDLSWTWIYIQANKDSESQTVSCTNFIISETEARFLQEKIRSDAFRPS
SQQAPHAQSPNPKCFKRQRTSNSQSEEPGAKVRRESEEDVYYVACTYSQGSPVPLGDSPS
LYTPPYSPASSGSPLQQEELSRDLLMDVHGYSDQLLSSPECSPSYYSYPESQLTCHQSPT
DSLPASTEHTFDQAAFGARSPLPSSSPTYDYQACSAEARLVPDCLSVSDMCEGSVDCALH
QDDFCLLEQPQGGGMVQVHHVPQHVLPTHSGLLTPNQSPTSTEPNHYNEREQEEISILAQ
QISSLASSFSMYQSPNPLQIVAQPSVADTLPSSCDWHCTLPSDIPLKREMVLDVAVFDSI
LKDLDMVPTKSTTSGPGVVPYNYQQGLLHCRSEPHQLVQGPLCVSSNIAEDPLPAEQFAA
MDPYSLQLGRHDQHTGLHQLNHYMQSALQQDGLTEENLY
NT seq
2280 nt
NT seq
+upstream
nt +downstream
nt
atgactatttggtgcaacgcgtgcagatgtcatgtcacttccccgtgcacctctcatcct
cagcacgcggatcagcgcagctccttctgcaggaggttcagatccaccaaaggagcgtcc
aaagcccgacgggaccaaatcaatcatgagatcaggaacatgcgcgctctgctgcccatc
acccaggaggaccaggagcgtctctcctacttacactccatggccgccatctgtgcctac
atccggaagtctgttctcctccagggactcccagctggagtgagatcacactgctcggtg
ccacacgaggccttccttccagctatgcacggcttcatcctggtcactactgcaaagggg
agtctggtctacgtgtcacaaaatgcatctgaatatctcggtttttcaatgatagatgtg
ctccaaggagacactttgtatgacatggttgaatcctctgacattcatgttgttaaatct
aacctggacattgacagcaactcatccacagagaggagctttatatgttgtatgcaaacc
tccaaggccttcaagctgcagcagggcagctgctgctccatgctggtgagagggagcttc
cagtctgtccctcagccttacccttcctcctcttcagcctgtcccaccagccagcctctg
tttgtggccctctgcaccccaaccgtcgaccgcctaaagagctgtgactccagcttctgt
cagagcttcaacagtgtgcacagactggatatgactttcactcagctgtcagacagtgtt
ctgtattttttggggtattcagcagaagaaatgatcagtcgatcgtggtacagcctcatc
caccctgaagatgttttttcgagcgcagcttgtcataaaagtttaatgcaggcagacgag
ggcttccaggtagaggtggtgctcagactccagtgcaaggatctgtcctggacctggatc
tacatccaagctaacaaggactctgagagccagactgtgagctgcacaaacttcatcatc
agtgaaacagaggccagatttcttcaggagaaaatccgcagtgatgccttcaggccctcc
tcccagcaggcgccccacgctcagagccccaatccaaaatgctttaaaaggcagaggacg
tctaacagccaaagtgaggagccaggtgctaaagtgaggagggagtcagaggaagacgtt
tactatgtggcgtgcacttactcccaaggctcccctgttcccctgggtgacagtccttct
ctctacacccccccctacagcccggcctcctccggctccccgctgcagcaggaggagctc
agccgtgacctcctgatggatgtgcatggatactcagatcagctgctttcctcccctgag
tgctctccctcctattattcctacccagagtcacagctcacctgtcaccaatcccccacc
gactccctcccagcatccactgaacacaccttcgaccaggcagccttcggcgctcgctcc
ccgctcccctcctcgtctcccacctatgattaccaagcgtgttcggccgaggctcgatta
gttccagactgcctgtctgtgtcggacatgtgtgaaggctcagtggactgtgctctacat
caagatgacttttgcctcctcgagcagccacaggggggcggcatggtccaggtgcatcat
gtccctcaacatgtgttgcccacacattctggccttctcacccccaaccagtctcccacg
tccacagagcctaaccattacaatgagagggagcaggaagagatcagtattctggctcag
cagatttcttccttagccagcagcttttccatgtatcaaagcccgaaccctcttcaaatt
gtggctcaaccttcagttgctgacaccctgccctcctcctgcgactggcactgtactctc
ccctcagacattcctctgaagcgcgagatggtcctggatgtcgccgtgtttgacagcatc
ttaaaagacctggacatggtcccaacaaaaagcaccacgtctggccctggggttgtcccg
tacaactaccagcagggcctgttgcattgcaggagtgagccccatcagctggtgcagggg
cccctctgtgtctcctcaaatatcgcagaggaccccctgcctgcagagcagttcgctgcc
atggatccctacagtttgcagttgggacgccatgaccaacacactgggttgcatcaactc
aatcactatatgcagagtgcacttcagcaagatggacttactgaggaaaacctgtactga
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