KEGG   Notothenia coriiceps (black rockcod): 104961282
Entry
104961282         CDS       T04920                                 
Name
(RefSeq) gem-associated protein 4-like
  KO
K13132  gem associated protein 4
Organism
ncc  Notothenia coriiceps (black rockcod)
Brite
KEGG Orthology (KO) [BR:ncc00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:ncc03041]
    104961282
Spliceosome [BR:ncc03041]
 Other splicing related proteins
  Proteins involved in snRNP biogenesis
   SMN complex factors
    104961282
SSDB
Motif
Pfam: RsbRD_N
Other DBs
NCBI-GeneID: 104961282
NCBI-ProteinID: XP_010787852
UniProt: A0A6I9PI27
LinkDB
Position
Unknown
AA seq 692 aa
MALMDKDSAVLQGAFLLADKLSLPSSLSSLQKADWSRVGHLVLEAVREICGQEELGVHLP
AAAVSCIKKLVCVVWLKVFCREAVTDVELSWRENPFFPLQNGLPEVNYVVLLEVVRALAA
APIFARFLLHLPQSQIATELERLVQHVRSGPTREEDVRFLLEVWWELWKGQDEQKEEGED
SIEKMFAGQFARLSSKSSSLSPQAAKRLKLDASDLPASPPTADVVNILLHALKDIKDKIS
RTDLCLQALSIALDTLYTAFLIDGAVGLPAIEKMHILSKVVRIREQNGEKLTPELLKEAL
RDLHASRTPSQFEPTGIKLGEASKIITDLAQFWQSNGLLGTSESSGSAFKLEQSVQRVLT
ALQEAEAPETTNEIDLQKSEKNSLRGFLESLSFSAAESTPELNARITAVIIKHRLDDYQT
FAELFASEKSWAAQDELWFDCLEKNQAAFQRQETLINLTSTIMSKLYSEGSNVSQCRKLM
KVVVDIFSALSLEDKNKALAAMLRLSSRGFFGGSVPSAVTVAFEQELNMAFNCIIQGRGG
ASAAASQANLNTAVSLVARVVFQNPEAGLRSCCHSAVFNKGAFTLMAKILQQLPGLRGPR
GREDELQNDEDASKKAEEEEDTQSGSALLCRCLQEMTKTKSLSANEREQLLKFLGLLMMP
VMAAEGEEEKMESFLTPQEVVNVFVLPNLSTT
NT seq 2077 nt   +upstreamnt  +downstreamnt
atggcattgatggacaaagattctgcggttcttcagggtgctttcctcctggctgataaa
ctgtctctcccctcctccctgtcctcccttcagaaggctgactggagcagggtgggccat
ctggtcctggaagcagtgagggaaatctgtggacaggaagaactcggtgttcacctccct
gcagcagctgtgagctgtataaagaaattagtttgtgttgtttggctgaaggtgttctgc
agggaggctgtaacggacgtagagctgtcctggagggagaaccctttcttccccctccag
aacggcctccccgaagtcaactatgttgtcctgctggaagtggtgagggcgttagcagct
gctccgatatttgcccgtttcctcttgcatcttccccagtctcagatcgctactgagctt
gaaaggttggtgcaacacgtgaggagcggccccactagagaggaagatgttcgatttctc
ctggaggtatggtgggaactgtggaaagggcaagatgagcagaaagaggaaggagaggat
agcatagagaaaatgtttgccggacagtttgctcggctctcgtctaaatcttccagtctt
tcccctcaggctgccaagaggctcaagctagacgcttcagatctacctgcatcaccgcca
accgctgatgtcgtaaacatcctccttcatgcacttaaagacataaaagataagatatct
agaacagatctctgcctccaggctctttccattgctctagatactctttacacggcattc
ctaatagacggagcggtcggacttcctgcgatagagaagatgcatatcctgtcaaaagtg
gtccgcatcagagaacagaatggcgagaaactgactcctgaacttttaaaggaggctctg
agagacctacatgcgtctcgcacaccatctcagtttgaacccaccgggataaagcttggt
gaagcctcgaagattataacagatctggctcagttctggcaaagcaatgggcttctgggc
acctctgaatctagcggctcagcatttaaactagaacaaagtgtccagagagtcctgacg
gctctacaggaagccgaagcgcctgaaactacgaatgaaatagaccttcagaagtctgag
aaaaacagcctcagaggtttcctggagtcactatctttctccgccgcagagagcacccct
gagctgaacgcccggattacagcagtcatcatcaaacaccgtctggacgactaccagacc
ttcgcagagttatttgccagtgagaagagttgggccgcccaagatgagctctggttcgac
tgcctggagaagaaccaggcagccttccagcggcaggaaacgctgatcaatctgacctcc
accatcatgagtaaactctacagtgagggctccaacgtgagccagtgcaggaagctgatg
aaagtggtcgtggacattttctcagcactttcactagaagacaagaacaaagcgttggct
gccatgctgagactgtccagccggggcttctttggcggctccgtcccctccgcggtgacc
gtcgcgttcgaacaggagcttaacatggccttcaactgcatcatccaagggaggggcgga
gcgtcggcagcagcgtcgcaggccaatctcaacacagcagtgtctttggtagcgagagtc
gtgttccagaaccctgaagccggtttgaggtcttgttgtcattccgctgtgttcaataaa
ggtgctttcactctgatggccaagatcctgcagcagctgccaggactcagaggaccgagg
ggaagagaagatgaactacaaaacgatgaagacgcaagcaaaaaggcagaagaagaagaa
gacactcagagtgggagcgctctgctctgcaggtgtctacaggagatgacgaagaccaaa
tcgttgtcagccaatgagagagagcagctgctcaagtttctgggtctgctgatgatgcct
gtcatggcagctgagggagaagaagaaaagatggaaagctttttgacacctcaggaggtc
gtgaatgtcttcgtcctgcctaacctctccaccacag

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