Notothenia coriiceps (black rockcod): 104961282
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Entry
104961282 CDS
T04920
Name
(RefSeq) gem-associated protein 4-like
KO
K13132
gem associated protein 4
Organism
ncc
Notothenia coriiceps (black rockcod)
Brite
KEGG Orthology (KO) [BR:
ncc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ncc03041
]
104961282
Spliceosome [BR:
ncc03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
SMN complex factors
104961282
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
RsbRD_N
Motif
Other DBs
NCBI-GeneID:
104961282
NCBI-ProteinID:
XP_010787852
UniProt:
A0A6I9PI27
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Position
Unknown
AA seq
692 aa
AA seq
DB search
MALMDKDSAVLQGAFLLADKLSLPSSLSSLQKADWSRVGHLVLEAVREICGQEELGVHLP
AAAVSCIKKLVCVVWLKVFCREAVTDVELSWRENPFFPLQNGLPEVNYVVLLEVVRALAA
APIFARFLLHLPQSQIATELERLVQHVRSGPTREEDVRFLLEVWWELWKGQDEQKEEGED
SIEKMFAGQFARLSSKSSSLSPQAAKRLKLDASDLPASPPTADVVNILLHALKDIKDKIS
RTDLCLQALSIALDTLYTAFLIDGAVGLPAIEKMHILSKVVRIREQNGEKLTPELLKEAL
RDLHASRTPSQFEPTGIKLGEASKIITDLAQFWQSNGLLGTSESSGSAFKLEQSVQRVLT
ALQEAEAPETTNEIDLQKSEKNSLRGFLESLSFSAAESTPELNARITAVIIKHRLDDYQT
FAELFASEKSWAAQDELWFDCLEKNQAAFQRQETLINLTSTIMSKLYSEGSNVSQCRKLM
KVVVDIFSALSLEDKNKALAAMLRLSSRGFFGGSVPSAVTVAFEQELNMAFNCIIQGRGG
ASAAASQANLNTAVSLVARVVFQNPEAGLRSCCHSAVFNKGAFTLMAKILQQLPGLRGPR
GREDELQNDEDASKKAEEEEDTQSGSALLCRCLQEMTKTKSLSANEREQLLKFLGLLMMP
VMAAEGEEEKMESFLTPQEVVNVFVLPNLSTT
NT seq
2077 nt
NT seq
+upstream
nt +downstream
nt
atggcattgatggacaaagattctgcggttcttcagggtgctttcctcctggctgataaa
ctgtctctcccctcctccctgtcctcccttcagaaggctgactggagcagggtgggccat
ctggtcctggaagcagtgagggaaatctgtggacaggaagaactcggtgttcacctccct
gcagcagctgtgagctgtataaagaaattagtttgtgttgtttggctgaaggtgttctgc
agggaggctgtaacggacgtagagctgtcctggagggagaaccctttcttccccctccag
aacggcctccccgaagtcaactatgttgtcctgctggaagtggtgagggcgttagcagct
gctccgatatttgcccgtttcctcttgcatcttccccagtctcagatcgctactgagctt
gaaaggttggtgcaacacgtgaggagcggccccactagagaggaagatgttcgatttctc
ctggaggtatggtgggaactgtggaaagggcaagatgagcagaaagaggaaggagaggat
agcatagagaaaatgtttgccggacagtttgctcggctctcgtctaaatcttccagtctt
tcccctcaggctgccaagaggctcaagctagacgcttcagatctacctgcatcaccgcca
accgctgatgtcgtaaacatcctccttcatgcacttaaagacataaaagataagatatct
agaacagatctctgcctccaggctctttccattgctctagatactctttacacggcattc
ctaatagacggagcggtcggacttcctgcgatagagaagatgcatatcctgtcaaaagtg
gtccgcatcagagaacagaatggcgagaaactgactcctgaacttttaaaggaggctctg
agagacctacatgcgtctcgcacaccatctcagtttgaacccaccgggataaagcttggt
gaagcctcgaagattataacagatctggctcagttctggcaaagcaatgggcttctgggc
acctctgaatctagcggctcagcatttaaactagaacaaagtgtccagagagtcctgacg
gctctacaggaagccgaagcgcctgaaactacgaatgaaatagaccttcagaagtctgag
aaaaacagcctcagaggtttcctggagtcactatctttctccgccgcagagagcacccct
gagctgaacgcccggattacagcagtcatcatcaaacaccgtctggacgactaccagacc
ttcgcagagttatttgccagtgagaagagttgggccgcccaagatgagctctggttcgac
tgcctggagaagaaccaggcagccttccagcggcaggaaacgctgatcaatctgacctcc
accatcatgagtaaactctacagtgagggctccaacgtgagccagtgcaggaagctgatg
aaagtggtcgtggacattttctcagcactttcactagaagacaagaacaaagcgttggct
gccatgctgagactgtccagccggggcttctttggcggctccgtcccctccgcggtgacc
gtcgcgttcgaacaggagcttaacatggccttcaactgcatcatccaagggaggggcgga
gcgtcggcagcagcgtcgcaggccaatctcaacacagcagtgtctttggtagcgagagtc
gtgttccagaaccctgaagccggtttgaggtcttgttgtcattccgctgtgttcaataaa
ggtgctttcactctgatggccaagatcctgcagcagctgccaggactcagaggaccgagg
ggaagagaagatgaactacaaaacgatgaagacgcaagcaaaaaggcagaagaagaagaa
gacactcagagtgggagcgctctgctctgcaggtgtctacaggagatgacgaagaccaaa
tcgttgtcagccaatgagagagagcagctgctcaagtttctgggtctgctgatgatgcct
gtcatggcagctgagggagaagaagaaaagatggaaagctttttgacacctcaggaggtc
gtgaatgtcttcgtcctgcctaacctctccaccacag
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