Notothenia coriiceps (black rockcod): 104961499
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Entry
104961499 CDS
T04920
Name
(RefSeq) whirlin-like
KO
K21879
whirlin
Organism
ncc
Notothenia coriiceps (black rockcod)
Brite
KEGG Orthology (KO) [BR:
ncc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
ncc03037
]
104961499
Cilium and associated proteins [BR:
ncc03037
]
Primary cilia and associated proteins
USH complex and associated proteins
104961499
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDZ
PDZ_6
USH1C_N
PDZ_2
HHD_RTEL1
zf-C2H2_10
T15H9-4_C
Motif
Other DBs
NCBI-GeneID:
104961499
NCBI-ProteinID:
XP_010788102
UniProt:
A0A6I9PIS4
LinkDB
All DBs
Position
Unknown
AA seq
290 aa
AA seq
DB search
MSSTDLERMSLSSSANSVASSARTLSANVRKLHNALNLLLNDFEREQFIHCLNVYHSKRN
VYDLVQTLNVILNAPSKRQLLPMLRLVIPRSDQLLFEQYTSEGLYLKSDSVASNGNAEPP
PGDFPSASPTPPGHFSPNNPPEFQVALRGSPDSFSTSSEGTAPLVPLLGRNFVHEPPGEI
RQVTMKRHKSNEGLGFSIRGGSEHGVGIYVSLVEPGSLAEKEGLRIGDQIMKVNDKVFDK
VTHADAVKVAVGESREETERLQVAAGHQTQVPCSYCNQGWTTQHSHTLSR
NT seq
873 nt
NT seq
+upstream
nt +downstream
nt
atgagcagcaccgacttggagcgcatgtcgctcagctcctcggccaactcagtggcttcc
agtgcccggacgctgtcggccaacgtgaggaaactgcacaacgcgctcaacctcctgctc
aacgactttgagagggagcagttcatccactgcctcaacgtgtaccactccaaacgcaac
gtgtacgacctggtccagaccctcaacgtcatcctcaacgcgcccagcaagcggcaactt
ctgcccatgcttcggttggtcatcccccgctccgaccagctcctcttcgagcagtacacc
tcggagggcctctacttaaaatcggattcagttgcaagcaatggcaacgctgaacccccg
ccgggagacttccccagtgccagccctactcctccggggcatttctcaccaaacaacccg
cctgagtttcaggtggcgttgcgtggctctccggacagcttcagcaccagcagcgaaggg
acagctcccctggtgcctctgctcgggaggaactttgtccacgagccgccgggcgagatc
cggcaggtcaccatgaagagacacaagagcaacgagggcctgggcttcagcatccgcgga
gggtccgagcatggggtcgggatctacgtgtccctggtggagccgggaagcctggcggag
aaagagggtcttcgaatcggcgaccagatcatgaaagtcaacgacaaagtcttcgacaaa
gtcacccatgctgatgctgtgaaggtggctgtaggagaaagcagagaggagacagagagg
ctccaagtagctgcagggcaccagacccaggtgccctgcagctactgcaatcaaggctgg
acgacacagcacagccacaccctctccagatga
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