Notothenia coriiceps (black rockcod): 104961702
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Entry
104961702 CDS
T04920
Symbol
pus7l
Name
(RefSeq) pseudouridylate synthase 7 homolog-like protein
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
ncc
Notothenia coriiceps (black rockcod)
Brite
KEGG Orthology (KO) [BR:
ncc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ncc03016
]
104961702 (pus7l)
Enzymes [BR:
ncc01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
104961702 (pus7l)
Transfer RNA biogenesis [BR:
ncc03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
104961702 (pus7l)
Prokaryotic type
104961702 (pus7l)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TruD
R3H_PUS7L
PUS7L_N
Motif
Other DBs
NCBI-GeneID:
104961702
NCBI-ProteinID:
XP_010788335
UniProt:
A0A6I9PSI3
LinkDB
All DBs
Position
Unknown
AA seq
675 aa
AA seq
DB search
MKQDSDATTVPACFISNHEGFLGSIKNFIKDFVVTEIDTSGQRVNTATNTPDSASSDENN
ETGAECKWNNHSSQDNDVAADCGLDVTIPSPGSFDLSVILGQSVSEELEQFVLTLKEKPT
KQELSLGSFTDKHHRANVHRAVRHRFPFLMTVTIQPEIRVREDPDYRELSQLVTEDEAED
FFRFIDAKVRGSSYTFGPDDDKDHRTVVHHFLSRRFGKLVETKSFTDQGTTAISVRLREQ
GRPKKRSAEERKEEEVYTGFTLRKENLETLEAISYMAASLGVLPSDFTYAGIKDKRAITF
QSMVVKKVSTQRLKEKMAEFERRGMCVTQIRSVSEQLRLGRLQGNHFDLVVRDLRPHGDT
HSSAADTHTRLAALVKEAVENVKARGFVNYYGPQRFGSVKSVQSDRVGLALLKEDMVSAV
RLFFTPEDLSDPVNNAKRHFIQTDNAKESLALMPLSKARERLMLRAMNRYGTGADGCTQG
WLSLPHSMRVFYPHAYCSRVWNEAVAHRLSTLGHRARRGDLVWLQEDSAESSLPQIHVVT
DQEEQEEVYTLGHVLMPMPGNTVKYPENAMGAWYQERLSRDGLDGCRFRVSNLKLNLPGC
HRPLLASPRNLSYQLQRAACGEAGEEESTGNSSRNSDRQLNGTTAEGKLTLTLNFDLDSS
CYATICLREIMKCDP
NT seq
2028 nt
NT seq
+upstream
nt +downstream
nt
atgaagcaggacagtgatgctacgaccgtccctgcgtgcttcatatcaaaccatgaaggc
tttctcggaagcatcaaaaactttatcaaagactttgtggtgactgagatagacacaagt
gggcagcgtgttaacacagccacaaacacaccggacagtgcctcctcagatgagaacaat
gaaaccggtgcagaatgtaagtggaataatcactcctcgcaggacaatgatgtcgcggct
gattgtgggctcgatgtcaccattcctagcccggggagttttgatttaagtgtgatttta
ggccagtcggtgagtgaggagctggagcagtttgtgttgactctcaaagagaagccaacc
aagcaggagctgtccttgggatccttcacggacaaacaccacagagctaacgtccaccgg
gccgtccgacaccgcttccccttcctcatgaccgtcaccatccagcctgagatcagagtg
agggaagaccccgactacagagagctctcccagctggtcaccgaggacgaggcggaggac
ttcttcaggttcatagacgccaaagtgcgaggctcgtcttatacgttcggacccgacgac
gataaggaccacaggacggtggtgcaccacttcctgagccggaggttcggcaaactggtg
gagacgaagagcttcaccgaccaggggacgacggccatctccgtgaggctgagagagcaa
gggaggccgaagaaaaggagcgcagaggaacggaaagaagaagaagtctacactgggttc
actctgcgaaaggagaacctggagactctggaggcgatcagctacatggcagcgtctctc
ggggtcctcccgtcagacttcacctacgctgggatcaaagacaagagagccatcaccttc
cagtccatggtggtcaagaaggtctcaactcagaggttgaaggagaagatggcagagttt
gagaggagggggatgtgtgtgacccagatccgctccgtcagcgagcagctcagactgggc
cggctgcaggggaaccacttcgacctggtggtgcgcgacctgaggccccacggtgacaca
cactcctctgctgcagacacacacactcgcctggctgcgctggtaaaggaggcagtggag
aacgtaaaggccagaggttttgtcaactactacggcccgcagaggtttggcagcgtgaag
agcgtccagtctgaccgcgtagggctggctctactcaaagaagacatggtgagtgccgtg
cgtctcttcttcactccagaagacctcagtgatccagtgaacaacgccaagagacacttc
attcaaacagataacgctaaggagtctttggcgctgatgccgctgtcgaaggccagggag
cggctgatgctccgggccatgaaccgctacgggaccggggcggatggatgtacccagggc
tggctgagcctgccccacagcatgagggtgttctacccccacgcctactgcagcagagtg
tggaacgaggctgtggctcacaggctgagcactctgggccacagagcccggagaggagac
ctggtgtggctgcaggaggactccgctgagagcagcctgcctcagatccatgtggtgacg
gaccaagaggagcaagaagaggtgtacacattgggacatgtgttgatgccgatgcctgga
aacacagtgaagtatccagaaaacgccatgggggcctggtatcaggagagactgtcccga
gacgggctggacggctgtcgcttcagagtcagcaacctcaaactaaacctccccggctgc
caccgccccctgctggcctcgccacgcaacctcagctaccagctccagagagcggcctgt
ggggaggcgggggaggaggagtcgacagggaacagcagtagaaacagtgaccggcagctc
aacggtactacggcagaggggaagctaactctcactttaaacttcgacctggactcctcc
tgctacgccaccatctgcctcagagagatcatgaagtgtgacccctag
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