Notothenia coriiceps (black rockcod): 104961755
Help
Entry
104961755 CDS
T04920
Name
(RefSeq) uncharacterized protein LOC104961755
KO
K08533
RAR-related orphan receptor beta
Organism
ncc
Notothenia coriiceps (black rockcod)
Brite
KEGG Orthology (KO) [BR:
ncc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ncc03000
]
104961755
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
ncc03310
]
104961755
Transcription factors [BR:
ncc03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
104961755
Nuclear receptors [BR:
ncc03310
]
1. Thyroid hormone like
1F. RAR-related orphan receptor
104961755
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Hormone_recep
TRPM_tetra
YjbF
Motif
Other DBs
NCBI-GeneID:
104961755
NCBI-ProteinID:
XP_010788395
UniProt:
A0A6I9PLB8
LinkDB
All DBs
Position
Unknown
AA seq
732 aa
AA seq
DB search
MGRRAEEMFLMVGEVSEKVIFIHDSLSELDSQLGQLQDLSALAVDTITLLSASDSLHQEA
RLAQCRVITSSPLILPHSLTLPHRGGADLDALNMCRVMPKSCKSTLPSLLKGHGLVASRL
ASQESRGGRQGHTEKGEEEAKQDPQTAPAQRPPENDLGVSKPASLSSFSHLYGGGVNLGR
LRDQTPCESIGPPHCGSPLAPRGLESPHHKLSTCDPYLYRSQEEPYVEEEEEEGEGEEER
THEQLSNIEVSRGSSNAVLLSDPREVSEGLVNPAFSLDVSQPSSRPRPYSQWGRPVKSSR
WACLSRDRPYGYCRSLSSSVENMTFSGAPQRRRRGSFPTLDEPISKESLSDGRRFSDETS
LRSSMSREWSKSSDFLQDCRGKNQNKKTVKIQESAPNTSHLSETCWRRGRRFRGESTCWL
ASTSLNQLTAGPCRHEAIKAGAWVYDADAVPIPVQLMRAPRTFTGTPDNASMGNFVICML
IHRIAQNIIKSHLETCQYTTEELQQLAWQTHSYEEVKMFQGKPRDVLWQQCAIQITHAIQ
YVVEFAKRISGFMELCQNDQILLLKSGCLEVVLVRMCRAFNPLNNTVLFEGKYGGMQMFK
ALGCDDLVSAVFDFAKSLCALQLTEEEIALFSAAVLISTDRPWLMEPRKVQKLQEKIYFA
LQHIMQKNHMDEDALAKLISRIPTLSALCTLHTEELQAFQQLHPETVNVLFPPLYKELFN
PDPNSGVMAMPK
NT seq
2199 nt
NT seq
+upstream
nt +downstream
nt
atgggccgcagagctgaggagatgttcctgatggtgggggaggtctcggagaaggtcatc
ttcattcatgacagcctgtcggagctggactctcagctgggtcagctccaggacctttct
gctctggctgtggacaccatcactctgctctctgcgtctgacagcctgcaccaggaggcc
cgcctggctcaatgtcgagtcatcacatcgtccccgcttatcctccctcacagcttgacc
ctcccacacagaggtggagcagaccttgatgcacttaatatgtgtcgagtgatgcccaag
tcgtgtaaaagtaccctgccttctttgctgaagggccatggccttgtggcgagtagactg
gcatcccaggagagcaggggaggcagacaaggacacactgagaagggagaggaagaagca
aagcaggatccacagactgctcctgctcaacgtccgcctgagaacgacctgggagtttct
aaaccggcgtctctttcttccttctctcacctctatggaggcggagttaatctgggtaga
ttgagggatcagaccccctgtgagtcaatcggaccgccgcactgcgggtctcctcttgct
cccagaggcctggagtcaccgcatcataaactctcgacatgtgacccatacctgtatcgc
agtcaagaagaaccttacgtggaagaggaggaagaagagggagaaggagaggaggaaagg
acacatgaacaactctctaatatagaagtatccaggggatctagcaacgctgtccttctg
tctgacccacgagaagtctctgagggtttggtgaatcccgccttttctctggacgttagc
caaccgagttctcggcccagaccttacagccagtggggccgacctgtgaaatcttccagg
tgggcgtgtctgtccagagaccgtccctacgggtactgcaggtctctgtcctccagcgtg
gagaacatgactttctcaggcgcacctcagagacgaaggagggggtcattccctactcta
gacgaaccaatcagcaaagagagtctgtctgatgggaggaggtttagtgatgaaacatcg
ctacgaagcagtatgagcagagagtggtccaagtcatctgacttccttcaagactgcaga
ggcaaaaaccagaacaagaagacagtgaagatacaagagagcgctccaaacacgtcccat
ttgtctgagacctgctggagaaggggccgaagatttagaggagaatctacatgttggttg
gcttcaaccagcctcaatcagctcacagctggaccatgtcggcatgaagccattaaggca
ggagcctgggtgtatgacgctgacgcggtgcccatacctgttcagctcatgcgggcaccc
aggacattcactgggaccccagacaacgccagcatgggaaacttcgtaatatgtatgcta
atacaccgtattgctcagaatatcatcaagtctcacctggagacgtgtcagtacacaaca
gaggagctgcagcagctagcctggcagacacactcctacgaagaggtcaaaatgttccag
ggcaagccccgggacgtgctgtggcagcagtgtgccatccagatcacccatgccatccag
tatgtggtggagtttgcaaagcgcatctcggggttcatggagctgtgccagaacgaccag
atcctcctgctcaagtcaggttgtttggaggtagtcttggtgcggatgtgcagggcattc
aaccctctcaacaacactgtgctctttgaagggaagtacggcggcatgcagatgttcaaa
gctctaggttgcgatgacttagtgagtgccgtgtttgactttgccaagagtttgtgtgca
ctgcagctgacagaggaggagatcgctctgttctcggcagccgtactcatttccacagat
cggccttggttgatggagcctcggaaagtccagaagctccaggagaagatttactttgct
ctgcagcacattatgcagaagaaccacatggacgaagatgcactggcaaagctgatcagc
cgaattccaacgttgtcagccctgtgcacgctccacaccgaggagctccaggccttccag
cagctccacccagaaacagtcaacgtcctattccctccgctctacaaagaactgttcaac
cctgaccccaactctggggtcatggccatgcccaagtga
DBGET
integrated database retrieval system
