Notothenia coriiceps (black rockcod): 104961814
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Entry
104961814 CDS
T04920
Name
(RefSeq) iroquois-class homeodomain protein irx-4-like
KO
K24889
iroquois-class homeodomain protein IRX
Organism
ncc
Notothenia coriiceps (black rockcod)
Brite
KEGG Orthology (KO) [BR:
ncc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ncc03000
]
104961814
Transcription factors [BR:
ncc03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
104961814
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
Motif
Other DBs
NCBI-GeneID:
104961814
NCBI-ProteinID:
XP_010788458
UniProt:
A0A6I9PMQ8
LinkDB
All DBs
Position
Unknown
AA seq
475 aa
AA seq
DB search
MSYPQFGYPYSSAPQFLMTTNSLTTCCESTGRSIADSGVAASGQTPVYCPVYESRLLATA
RHELSSAAALGVYGSPYTGSQGYGNYVTYGTDASAFYSLGAFDTKDATASAHAGITQAAY
YPYDPTLGQYQYDRYGSMDGGTRRKNATRETTSTLKAWLQEHRKNPYPTKGEKIMLAIIT
KMTLTQVSTWFANARRRLKKENKMTWPPRNKGSEEKRYDEDDDGSQEEQIKSENNEDDTR
SRPDKDLQLSDLDDFDTLESENSECELKHRYHMNTHMSTTGDCPAEHLIKDSSLKISIPI
SLGGEQDLSKSCLKTNPEDFQVDSRQQAKACYNQQQQQQGHQILDGKPRIWSLAQTATSL
NQTEYPSCMLRCQPPPSSLSPPPVATSPVTGLDNRQDSPVTTLRNWVDGVFHDPLFRHST
LSQALTNTAVSWSANTKGALLEAERSTSALQQHHQDSPKDSAMSFPKTINKLFCS
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atgtcatatccacaatttggatatccctattcgtctgctccacaattcctgatgacaacc
aactctttgaccacttgctgcgagtccaccggcagatccatagccgactccggagtagcc
gcgtccgggcagacaccagtctactgtcccgtgtacgagagccggctgctggccacggcg
aggcatgagctcagctcggccgccgcgttgggcgtatacgggagcccgtacaccggcagt
cagggatatgggaactacgttacatacggcacggacgcctcggctttctactcgctggga
gcatttgatactaaagatgccacagcttctgcacatgcgggaataacccaggcagcctac
tacccttatgatcctaccttgggacagtatcagtatgacagatatggttccatggatggg
ggaacaaggcgaaagaacgccacgcgtgagacaaccagcaccctgaaggcctggctgcag
gagcaccggaagaacccgtacccgactaaaggggagaagatcatgctggccatcatcacc
aagatgaccctgacgcaggtctccacatggttcgccaacgccaggaggaggctgaagaag
gagaacaagatgacatggccgcccagaaacaagggctcagaggagaagagatatgacgag
gatgatgatgggtctcaggaggagcagatcaaaagcgagaacaatgaggatgacacaaga
agtcggcctgataaagatctccagttgagcgacttggacgacttcgacacgctggagtct
gagaactcggagtgtgagctgaagcaccgctaccacatgaacacacacatgtcaacgacg
ggcgactgtcccgcagaacacctcatcaaggactcgtctctgaaaatctccatccctatt
tctctgggaggggaacaggacttgagcaaaagttgtctcaaaacgaacccggaagacttc
caggtggacagcagacagcaggcaaaggcatgttataaccagcagcagcagcaacagggg
catcagattttagacggcaagcctcgcatctggtctttggcgcaaactgcgacgtccctg
aaccagactgagtacccgtcctgtatgctgaggtgccagccgccgccctcctccctcagc
ccgccccccgtagctacctcacccgtgactggcctggacaacaggcaggactcgccggtc
acgaccctgagaaactgggtggacggggttttccacgacccgttgttcaggcacagcact
ttgagccaggccctgaccaacaccgccgtctcttggagcgcgaacaccaaaggcgcgctc
ctggaggctgagaggagcacttccgccttgcagcagcaccaccaagactcccccaaagac
agtgccatgagtttcccaaaaactatcaacaaactgttctgctcctaa
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