Notothenia coriiceps (black rockcod): 104961861
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Entry
104961861 CDS
T04920
Symbol
trim2
Name
(RefSeq) tripartite motif-containing protein 2 isoform X1
KO
K11997
tripartite motif-containing protein 2/3
Organism
ncc
Notothenia coriiceps (black rockcod)
Brite
KEGG Orthology (KO) [BR:
ncc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ncc04121
]
104961861 (trim2)
Ubiquitin system [BR:
ncc04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
104961861 (trim2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NHL
DUF4934
DUF5128
Filamin
zf-B_box
zf-RING_UBOX
zf-C3HC4
SGL
zf-C3HC4_2
zf-RING_2
zf-C3HC4_3
zf-RING_5
TEN_NHL
Invasin_D3
RING_XB3-XBAT31
zf-C3HC4_4
zf-ANAPC11
Beta-prop_IFT122_1st
CTXL_M
Prok-RING_4
PI3K_P85_iSH2
UPF0508_N
ZK652
PFam54_60
zf-RING_11
DUF5446
PAF-AH_p_II
Anticodon_2
YusW
CRLF3_N
CCDC84
DUF7605
NPV_P10
Motif
Other DBs
NCBI-GeneID:
104961861
NCBI-ProteinID:
XP_010788511
UniProt:
A0A6I9PCI5
LinkDB
All DBs
Position
Unknown
AA seq
748 aa
AA seq
DB search
MASEASTLPSPVVRQIDKQFLICSICLDRYENPKVLPCLHTFCERCLQNYIPAHSLTLSC
PVCRQTSILPEKGVAALQNNFFITNLMDVLQRAPDSCSQEAAALNDITTVAAAQLLSCPN
HGGNVMEFYCPPCETAMCQECTSGEHGEHPTVPLKDVVEQHKASLQDQLNSVKKRLPEID
SALQMLSEILQQLTNQKSSIEDNIHTTFDELQKTLNVRKSVLLMELEVNYGLKQKVLQAQ
LDTLLQGQDGINSSCNFTEQALSHGTEAEVLLVKKQMSERLVELASQELPLQPGENDQLD
FIVETDGLKKSIHNMGTILTTNAVASETVATGEGLRHCVVDVPTSITITTKDKDGELCKM
GNAVITAEMSSADGSKGEGEILDNKNGTYEYLFSAPKEGTFNLSLRLYDQHIKGSPFKIK
ATKSVDVSQSSDSMKKRLKSPGSSHIKQKAIKRPASMYSTGRRKENPIEDDLIFRIGTKG
RNKGEFTNLQGVSTSALGKVLIADSNNQCVQIFTNDGQFKSRFGIRGRTPGQLQRPTGVA
IHPNGDIIIADYDNKWVSIFSSEGKFKSKIGSGKLMGPKGVSVDRNGHIIVVDNKACCIF
IFQVNGKLVTKFGNRGNGDRQFAGTLNGPHFAAVNNKNEIIVTDFHNHSVKVFNTEGEFL
LKFGSNGEGNGQFNAPTGVAVDVNGNIIVADWGNSRIQVFDGSGSFLSYINTSADPLYGP
QGLALTSDGHVVVADSGNHCFKVYRYLQ
NT seq
2247 nt
NT seq
+upstream
nt +downstream
nt
atggccagtgaagcctccactcttcccagtcctgttgtccgccagatcgacaagcagttc
ttgatctgcagcatatgtctggaccgctacgaaaaccccaaagtactgccctgcctacac
accttctgtgagaggtgtcttcagaattacatcccggcccacagcctcactctgtcgtgc
cccgtgtgccgccagacctccatcctgccggagaaaggtgtggcggcattacagaataac
ttcttcatcaccaacctgatggacgtgctgcagcgagcgccggacagctgcagccaggag
gccgcggctctcaacgacatcaccactgtggctgctgcacaactgctctcctgccccaac
catggaggcaacgtcatggagttttactgtccgccttgtgagacggccatgtgtcaggag
tgtacgagtggggaacatggagaacacccaaccgtgcctcttaaagacgtggtggagcaa
cacaaggcatcattacaggaccagctaaactccgtcaagaagaggttgccagagatcgac
tccgcactgcagatgctgtcagagatcctgcagcagctgaccaatcaaaagagttctatt
gaggacaacatccatactacctttgatgagttgcagaagactctgaatgtccgcaagagc
gttttactgatggagctggaggtcaactacggcctcaagcagaaggtgctccaagcccag
ctggacactctgctgcagggccaggacggcatcaacagcagctgtaacttcacggagcag
gcgctgagccacggcaccgaggccgaggtgctgctggtgaagaagcagatgagcgagcgt
ctcgtggagctggccagccaggagcttcccctgcagcccggggagaacgaccagctggac
ttcatcgtggagacggatgggctaaagaagtccatccacaacatgggcaccattttgacg
acaaatgcagtggcctctgagactgtggcgacaggtgaagggttacgccactgtgttgta
gacgtccccacctccatcaccatcaccactaaggacaaagacggagagctgtgtaagatg
ggcaacgccgtcatcactgctgaaatgtcctcagctgatggaagcaaaggtgaaggggag
atactggacaacaaaaatggcacttatgagtacctgttctcagcccctaaagaggggact
tttaatctatcactgcgtttgtacgaccaacacattaaagggagcccctttaaaataaag
gccaccaaatccgttgatgtatcgcaaagttcagacagcatgaagaagaggctgaagtct
ccgggcagcagccacatcaagcagaaggccatcaagaggccggccagtatgtacagcacg
gggcggaggaaagaaaaccccatcgaggacgacctcatcttcagaataggcacaaaagga
agaaacaaaggggagttcactaacctgcagggagtgtctacctctgctctggggaaggtg
ctgatagcagacagcaacaaccagtgtgtgcagattttcacaaatgacggccagttcaaa
agtcgttttggtatccgcggccggactccgggtcaactgcagcgaccgacaggagtggcc
atccacccgaacggtgacatcatcatcgcagactacgacaacaaatgggtcagcatcttt
tcaagtgaaggcaagttcaagagcaagattggctcggggaagctgatgggccctaaaggc
gtgtcggtggacaggaacggtcacatcatcgtggtcgacaacaaggcctgctgcatcttc
atctttcaggtcaacggcaagctggtcacaaagttcggtaaccgtggcaatggtgaccgg
cagtttgcaggtacactcaacgggccacactttgctgctgtcaacaataaaaatgaaatc
attgtgacagatttccacaaccactcagtcaaggtgttcaacactgaaggagagttcttg
ctgaagtttggttctaatggtgagggcaacggccagttcaacgcccccacaggagtggca
gtggatgtcaatggaaacatcatcgtggcagactggggcaacagcaggatacaggtgttt
gacggcagcggttccttcctgtcttacatcaacacctcagccgaccctctgtacggtcct
cagggactcgctctcacctctgatggacatgttgtggttgcagattcgggcaaccactgc
ttcaaagtctaccgctacctgcagtag
DBGET
integrated database retrieval system
