Notothenia coriiceps (black rockcod): 104961899
Help
Entry
104961899 CDS
T04920
Name
(RefSeq) UV-stimulated scaffold protein A-like
KO
K23720
UV-stimulated scaffold protein A
Organism
ncc
Notothenia coriiceps (black rockcod)
Pathway
ncc03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ncc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
104961899
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ncc03400
]
104961899
DNA repair and recombination proteins [BR:
ncc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
Other TCR factor
104961899
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UVSSA_N
RabGAP-TBC
LBD_receptor
INTS1_R4
Motif
Other DBs
NCBI-GeneID:
104961899
NCBI-ProteinID:
XP_010788563
UniProt:
A0A6I9PN00
LinkDB
All DBs
Position
Unknown
AA seq
444 aa
AA seq
DB search
MSRCLSGVSAVSQAMELSQRDRLSELVEELTTSGQPQLHPERMKEVKRICRVSNDCIEHV
YNSVMSQLNQEHAEVRLSAFQIAMELFSRSHHFRTLLVDNFQEFLELTVETDSEQPLPPP
KEVARKLRAQAIQAVQSWQASYGTAYKKLALGFHFLKQVKKVDFQDAEARTVSERRREEE
RQRKRERIYKERVEAASTDMEESYQEIEATLTEMESCMSLLIPGFHFTESHTANSSPPHS
QPANEPSAVEDEPCCSKDLQEERTEGRVQEEEEEKNNDSEETIGDMKEGRTEERDLEGRG
EEKGKEDEEEEEEEEEEEEEKSSEEAFIRSSGLISHSYNLDLNLSPGLHVRETEDNEAVV
TTVIDLHRLIMSKHLPAVQSWVQVFTKSCAEQRLLQRALDLKRSLETVLQKHKELHIDYK
TRQRRVHDAGGNESHQDPSDALPC
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atgtccagatgtttgtccggtgtatctgctgtctctcaggcgatggagttgtctcagagg
gaccggctgtcggagctggtggaggagctgaccacatctggacagcctcagctccacccg
gagcggatgaaggaggtgaagaggatctgcagagtgtctaatgactgcatcgagcacgtg
tacaactctgtgatgtctcagctgaaccaggaacatgctgaggtgcgactgtccgccttc
cagatcgccatggagctcttctccaggtctcaccacttcaggacgctgctggtggacaac
ttccaggagttcctggagttgaccgtggagacagactcggagcagcccctcccccctcct
aaggaagtagccaggaagttgagggcacaggccatccaggctgtccaatcatggcaggcc
tcctatgggacagcctataagaagttagcattaggcttccacttcctcaaacaggtgaag
aaggtggacttccaggatgctgaggcccggaccgtatcagagaggaggagggaggaggag
aggcagaggaaaagggagaggatatacaaggagagagtggaggcagcctccacagacatg
gaggagtcttatcaggagatcgaggccacactcacagagatggagtcctgtatgagcctg
ctcatccccgggttccacttcacagagagccacacagccaatagcagccctccacactcc
caaccagccaatgaaccgtcagcagtggaggacgagccctgctgcagcaaagacctgcag
gaggagcggacggaagggagggtacaggaggaggaggaggagaagaataatgactcagag
gaaacgataggagacatgaaggaagggaggacagaggagagggatttagaggggaggggt
gaggagaagggaaaggaagatgaggaggaggaggaggaggaggaagaggaggaggaagag
aaaagtagtgaggaagcgttcatccggagctctgggctgatatctcactcctacaacctg
gacctgaacctcagccctggtcttcatgtcagggagacggaggataatgaggcagtggtt
accacggtgatagacctccatcggctgataatgagcaaacacctaccagctgtgcagagc
tgggttcaggtgttcactaagtcgtgtgctgagcagcgtctcctgcagagggctctggat
ctgaagaggagtttggaaactgtgctgcagaaacacaaagagctgcacatcgactacaag
accagacagcgcagagtgcatgatgctggtggaaatgagtcccatcaggatccatcggat
gctctgccttgctga
DBGET
integrated database retrieval system
