Notothenia coriiceps (black rockcod): 104961956
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Entry
104961956 CDS
T04920
Symbol
msx1
Name
(RefSeq) homeobox protein MSX-1
KO
K09341
homeobox protein MSX
Organism
ncc
Notothenia coriiceps (black rockcod)
Brite
KEGG Orthology (KO) [BR:
ncc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ncc03000
]
104961956 (msx1)
Transcription factors [BR:
ncc03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: NKL
104961956 (msx1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Homeodomain
Homeobox_KN
HTH_NDX
DUF7645
Motif
Other DBs
NCBI-GeneID:
104961956
NCBI-ProteinID:
XP_010788628
UniProt:
A0A6I9PN59
LinkDB
All DBs
Position
Unknown
AA seq
279 aa
AA seq
DB search
MAPSIAMSALTAALKTEELPPRSVLVSRVEMQTSLSPVEEPVKPKVAILPFSVEALMADR
KPSREVVSPDALSVPGTSHVLGKGIRMGSFGSLDTPALPMSSPFSVGDIMNMSDDVLIKP
ESPDSNERNSWLQSPRFSPTPPRRLSPPACPLRKHKTNRKPRTPFTTSQLLALERKFRQK
QYLSIAERAEFSSSLNLTETQVKIWFQNRRAKAKRLQEAELEKLKMAAKPMLPPAFGISF
PLGAHPASYGSHPFHRHSLPVSPMGLYAAHVGYSMYHLA
NT seq
840 nt
NT seq
+upstream
nt +downstream
nt
atggccccatcgatcgccatgtcagctttaaccgctgctttgaaaaccgaagagcttccc
ccccgctcagtgctcgtcagccgggtcgagatgcagaccagcctgagtcccgtggaggag
cccgtgaagcccaaagtagctattttgcccttcagcgtcgaggcgttgatggccgatagg
aaacccagcagagaggtggtatcaccggatgccctgtccgttcccgggacgtcacatgtg
ctggggaagggcattaggatgggctcgttcggtagtctggatactcctgctttacccatg
agctccccgttttcggtgggcgacatcatgaacatgtctgacgacgtgttgataaaaccc
gagagcccggacagtaacgagagaaattcatggctacagagtccccgtttttctccgacg
cctccacgaaggctgagtcctcctgcgtgtcccctgcgtaaacacaagacgaacagaaag
ccccggacccccttcaccacgtcccagctgctggctctggagaggaagttccggcagaag
cagtacctttccatcgccgagcgcgcagagttctccagctcccttaacctgacggaaaca
caggtgaaaatctggtttcagaacaggagggccaaagccaagcggctgcaggaggcagaa
cttgaaaaattgaaaatggcagctaaacctatgctgcctccagctttcgggatttccttt
cctctcggtgcgcaccccgcgtcctatggctcgcacccgttccacaggcactcgctgccg
gtttcccccatgggactgtacgccgcgcacgtcggatacagtatgtaccacctcgcttga
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