Notothenia coriiceps (black rockcod): 104962016
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Entry
104962016 CDS
T04920
Name
(RefSeq) sialic acid-binding Ig-like lectin 10
KO
K06749
sialic acid binding Ig-like lectin 10
Organism
ncc
Notothenia coriiceps (black rockcod)
Pathway
ncc04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
ncc00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
104962016
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04091 Lectins [BR:
ncc04091
]
104962016
Lectins [BR:
ncc04091
]
I-type lectins (Siglecs)
104962016
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ig_3
I-set
V-set
Ig_2
ig
Ig_CD22
C2-set_2
C1-set
Motif
Other DBs
NCBI-GeneID:
104962016
NCBI-ProteinID:
XP_010788703
UniProt:
A0A6I9PNC3
LinkDB
All DBs
Position
Unknown
AA seq
811 aa
AA seq
DB search
MLGVGKLPETLTLHKREEIDERGEEESGHSRDTQQRSLWRGDSKKQCQLCPVKTDGLKYQ
IGMFVLICATLLFSVRGIHAETGASVWGRQYCEAGTYCITLGEADITAEAGLCVVIPCSF
TTPAAFKPKHIVWYKCESSTTCGDSDMIFHTNKLNTKVQSLFKGRVSLLQPDVSQGNCSI
IINDLTESDSGRYKLRVDGLLNGKVDGFTYPERAVLSVKGLTQKPSVMIPPLAEGQPTTL
TCTAPGLCSGSDPKFTWTWRGAGEKDSQITGNIIALKTENLTAVTQSHSSTLTFNPSAEH
HNSNVTCEVGFRNNITAEETKALNVTYVKTFIISGNTTVKEGETLNLTCSVDSFPPSLIM
WTKYSDRNMQNGSEPSLQNSTLTDLQNGTETFLQEESGIGILSISNVTPEDSGLYICTAR
HMNYTLMEKVNVTVTYTRETLITGDTTVKDGDSLNLTCSVESFPPSHITWTKPGFNTNLN
NGPDAYLQSNNGSATLVIPNVTTEYSGQYSCTVQHLDTTVTMYADVTVTWFSRIFNNSEC
VVHSDILSCVCISEGFPLPTIEWPLLKKHTEYSVFTTVLNHTVNSSLTLKYYSNTSVECV
SIHENGEAKKTLTIRINTMEQGGQSKNILKLVSQLEVIIAFFIGLLLSAVLCCFATKCHR
NKQKNSGNLEETLGMVASQEDPLIDAGQAAEDYQTYHQEAAEEEGAVAAEKGDTDLNGGP
KEVEYASIDFSMLERKSQREAVKRPGTTETEYAEINKGVKEEKEDNSGEEGYMLEEEEAV
VMEEEETKHHEHEEEEDAAVYSNVKDIMAES
NT seq
2436 nt
NT seq
+upstream
nt +downstream
nt
atgctaggtgttgggaaactccctgaaactttgacgttgcataagagggaagaaatagat
gagagaggagaggaagagtcaggtcatagcagagacactcagcagagatcactgtggaga
ggagacagcaagaaacagtgtcaactttgtcctgtgaagactgacggtctcaagtatcaa
atcgggatgtttgttctaatctgtgcaacgctgcttttctctgtgaggggcatccatgca
gaaacaggtgcatcggtttggggaagacaatactgtgaagcaggaacatactgtatcact
cttggtgaagcagatataacagcagaggctggactctgtgttgtgataccgtgttctttc
actactcctgcagcctttaaacccaaacatatagtttggtacaaatgtgaatcatctaca
acatgtggtgattctgacatgatattccacaccaacaagttaaacaccaaggttcagtct
ttgttcaaaggacgggtttcactgttgcagcctgatgtgagtcaggggaactgcagcatc
atcatcaacgacctcactgagtcagactctggaagatataaactcagagttgatggttta
ctgaatgggaaggtggatggatttacataccctgaaagagcagttctctctgtaaaaggt
ctgacccagaagccctcagtgatgattcctcctctggcagaggggcagccgaccacactg
acctgcactgctcctggtctctgttctggatctgatcctaaattcacctggacatggaga
ggagcaggagagaaggactctcagatcacaggaaacatcattgctctcaagactgagaat
ctgactgctgtcacacagagtcacagctccactttgacctttaacccttcagctgaacac
cacaacagcaatgttacctgtgaggtcggcttcagaaacaacatcactgcagaggagaca
aaggctcttaatgtgacctatgtgaagacattcataatctctgggaatacaactgtgaag
gagggggagactcttaatttgacctgcagtgttgatagtttccctccatccctcatcatg
tggactaaatactctgaccgaaatatgcaaaatggatcagaaccaagtcttcaaaacagc
actttaactgacctgcagaacggcaccgagaccttcctgcaggaagaaagcggaatcggc
atcctctccatctcaaacgtgacgccagaagattctggactgtacatctgcacagcgaga
catatgaactacaccctgatggaaaaagttaatgtaacagtcacatatacgagggaaact
ctgatcactggggatacaactgttaaggatggagattctctgaatttaacctgcagtgtt
gaaagttttcctccgtctcatatcacatggactaaacctggcttcaacacaaacctgaac
aatggacctgatgcgtacctgcagagcaacaatgggtcagccacacttgtcatccctaat
gtgaccacagaatattctggacagtacagctgtaccgtgcaacacttggacaccacggtg
actatgtatgctgatgttacagtgacttggttttcaaggatcttcaacaactctgaatgt
gtggttcattcagacattctgagttgtgtgtgtatcagcgaagggtttcctctacccacc
atcgaatggccactgttgaagaaacacaccgagtactctgtctttactactgtgttaaac
cacacagtcaacagcagccttactttaaaatattatagcaacacctctgttgagtgtgta
agcatccatgaaaatggggaagcaaaaaaaaccctcaccatcagaataaacacgatggaa
caagggggtcaatccaaaaacatattaaaacttgtttcacagctggaagtcatcattgcc
tttttcattgggttacttctgtcagcagtcctttgctgttttgccacaaaatgccacaga
aataaacagaagaactctggaaatctggaagagactctggggatggtggccagtcaagag
gatccactgatagatgctggtcaagcagcggaagattatcaaacctaccaccaagaagca
gctgaagaagaaggagctgtggcagcagagaaaggagacactgatctcaatggaggacca
aaagaagtggagtacgcgagcattgatttctccatgttggaaagaaagagtcagagggag
gcagtaaagaggccagggaccacagagacggagtacgctgaaattaacaaaggagtaaaa
gaagaaaaggaagacaatagcggagaggaaggttatatgttggaagaggaggaggctgtg
gttatggaggaagaggagacaaaacatcatgaacatgaggaagaggaggatgctgctgtg
tattctaatgtgaaggacatcatggctgagagttga
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