Notothenia coriiceps (black rockcod): 104962031
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Entry
104962031 CDS
T04920
Symbol
abca7
Name
(RefSeq) ATP-binding cassette sub-family A member 7
KO
K05641
ATP-binding cassette, subfamily A (ABC1), member 1
Organism
ncc
Notothenia coriiceps (black rockcod)
Pathway
ncc02010
ABC transporters
ncc04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
ncc00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
104962031 (abca7)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
104962031 (abca7)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ncc02000
]
104962031 (abca7)
Transporters [BR:
ncc02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
104962031 (abca7)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC2_membrane_3
R1_ABCA1
ABC_tran
AAA_21
DrrA1-3_C
Motif
Other DBs
NCBI-GeneID:
104962031
NCBI-ProteinID:
XP_010788720
UniProt:
A0A6I9PM46
LinkDB
All DBs
Position
Unknown
AA seq
1217 aa
AA seq
DB search
DSESSMSEDTGLGSEESNSYLAALLSLAQQHIPGARLVEESGREAVLNLPQAAAKDSSLA
VFLAELDKRLSELGVSSYGLSDSTLEEIFLRVAEETGVDADPELQAESPSRQQPSAGQRV
ERQDAEEPETGRKRLRKQEPQETDLLSGDGRGGVPLTGWWLTWQQLRALFIKRWLYARRS
RRGFFAQIVLPAVFVLIALLFSLIVPPFGKYPSLQLQPWMYGEQFTFFSNDEPGNPAMKK
LLEALLDQPGFGTKCMEREDNSTIPVCEDERGGLFMRPQLSYTSWQMFSRGNWSRHKPSP
DCQCSTEDVRRMLPDCPQGAGGLPPPQRKRLTGDTLLNLTSYNISDYLVKTYSQILKKSI
KTKKWVNEFRYGGFSLGGSSTQTLSQVHHVQDSITAIRTQYRVPQNSSLDHLLNRLPDFL
GGLNSQNNVKVWYNNKGWHSMVSFVNVMNNGLLRASLDPGPERRKYGITAYNHPLNLTKE
QLTEMAMMTTSVDVLVSICVIFAMSFVPASFILFLIEERVSKAKHLQFVSGVKPILYWLA
NFSWDMLNYTVPATMVVLIFICFQQQSYVSETNLPALILLLLLYGWSITPLMYPASFLFS
VPSTAYVVLTSINLFIGINGSIATFVLELFVDEHLNEVNRILKKVFLIFPHFCLGRGLID
MAKNQAMSDAFQRLGTKQTLDPLQWDFVGKNLFAMAVEGLIFFIFTILLQYKFFINFRPW
WSEPEVPPLGPEDEDVARERERVISGKAQSDILTMLDLSKVYKAGKMPAVDRLCLGIPRG
ECFGLLGVNGAGKTSTFRMLTGDTSITNGEAFLNQHSVTTEMERVHQLMGYCPQFDAISD
LLTGREHLELYARLRGVSEESVAKVAQWGVTKLGLTQYSEREAGGYSGGNKRKLSTAISL
IGAPPVIFLDEPTTGMDPKAKRFLWNCIVSVTKEGRAVVLTSHSMEECEALCTRMAIMVN
GRFQCLGSVQHLKNRFGDGYTIVLRLMDNMSEPASCPISSFMQSSFPSIELKERHQSVLQ
FQLPSHACCLARVFEVLANNHEELGIIDFSVSQTTLDQVFVNFAKEQKDDDVLTDVIISN
STVQTKLTTLVNRVNPPTILPLPPITPPQPSKSPQQPAKSSGSKPKEGKSKNPKPGMVKS
KEGKANWEKSSSMAMTQIPQKEEKAQRTSRRASGGSDSSSGGAQGETSQSSKRKAESSSQ
NPSALFIVDGNTQDSAL
NT seq
3654 nt
NT seq
+upstream
nt +downstream
nt
gacagtgaatcatccatgagtgaagacaccggcctgggaagtgaggagagcaactcgtac
cttgcggcgctgctctccctggcgcagcaacacatccctggggcgaggctggtggaggag
tctgggcgcgaggcggtgctcaacctgccgcaggcggctgccaaggacagcagcctggcc
gtcttcctggccgaactggacaagaggctgagcgagctgggcgtcagcagctacggcctg
tcggacagcactcttgaggagatctttttacgagtggctgaggaaacaggggtcgatgct
gacccagagctgcaggctgagtctcccagcaggcagcagccgtcagccgggcaacgggtg
gagaggcaagatgctgaagagccagaaacaggaaggaaaaggcttcgtaagcaagaacct
caagagacggacctgctgagtggagatggccgagggggggtcccgctgacgggctggtgg
ctgacctggcagcagctcagggctctctttattaaacgctggctttacgctcgaagaagc
cgcaggggcttctttgctcagattgtgctgccggctgtgttcgtgctgatcgccctgctc
ttcagcctcatcgttcctccctttgggaagtatccctccctgcagttgcagccctggatg
tacggggaacagttcaccttcttcagcaatgatgaacctgggaacccggccatgaagaaa
ctactggaagctttgctggaccagccaggttttggtaccaaatgcatggagagagaggac
aacagcacgattcctgtgtgtgaagacgagcgggggggcctgttcatgcggcctcagttg
tcttatacttcctggcagatgttcagcagaggcaactggagcagacacaaaccgtcgcct
gactgtcagtgtagcacagaggacgtccggcggatgctccccgactgcccgcagggggcc
gggggtctgccgcctccacagagaaagaggctgactggagacaccctcctaaatctgaca
agttataacatctctgattacctggttaaaacctactctcagatcctcaagaaaagcata
aaaaccaagaagtgggtaaatgaattcagatacgggggtttctccctggggggcagctcc
actcagaccttatctcaggtgcatcatgtccaagactccatcacggccatcaggactcaa
tatcgagttccacagaacagttcactggatcatttgctaaacagactgccagattttcta
ggaggactgaacagtcaaaacaatgtcaaggtgtggtacaataacaagggatggcattca
atggtttcatttgtcaacgtgatgaacaacggcctgctgagagccagtctggaccccggt
ccagagaggaggaaatacggcatcactgcctacaaccatccgctcaacctcaccaaggaa
caactcacagaaatggctatgatgaccacatcagtggacgttctagtttccatctgcgtg
atctttgccatgtcctttgtgccggccagcttcatccttttcctgattgaagagcgagtc
agcaaagccaaacaccttcagtttgtcagcggagtcaaaccgatcctctactggctggcc
aacttcagctgggacatgttgaactacaccgtcccggccaccatggtggtgctgatcttc
atctgcttccagcagcagtcgtacgtctctgagaccaacctgccggctctcatcctgctg
ctcctgctctacgggtggtccatcacccctctgatgtacccagcatcctttctgttctcc
gtgcccagcacagcctacgtggtcctgacctccatcaacctcttcatcggaatcaacggc
agcatcgccaccttcgtcctggagctgtttgttgatgagcatctgaacgaggtgaacagg
atcctgaagaaggtgtttcttatcttccctcatttctgcctgggacgaggactcattgac
atggccaaaaaccaggccatgtccgacgccttccagagactgggcacaaagcagactctg
gaccctcttcagtgggactttgtagggaagaacctgtttgccatggcagttgagggtctt
atcttcttcatcttcaccatactgctgcaatataagttcttcattaatttcaggccgtgg
tggtccgagcctgaggtgcctcctcttggtccagaggacgaagacgtggccagggagaga
gagagggtgataagtggcaaagcccagtcagacatcctaaccatgttagacctgagcaag
gtttataaagcaggcaagatgccggcagtcgatcgtctctgcctcgggattcctcgggga
gagtgttttggcctgctgggggtgaacggcgcaggaaagacctccacttttcgcatgctg
accggagacacaagcatcaccaacggagaggctttcctgaatcaacacagtgtgacaaca
gagatggagcgagtgcaccagctgatgggttactgtccgcagtttgacgccatcagcgac
ctgctgacgggtcgggaacatctggagctgtacgcccgcctgcggggagtttcagaggag
tctgtcgccaaggtggcgcagtggggagtgacgaagctgggactcacccagtactctgag
cgggaggcgggaggatacagcggaggcaacaagagaaaactctctaccgccatctccctc
atcggggctccgcctgttatattcctggatgagcccaccactggcatggacccaaaagcc
aaaaggtttctgtggaactgcatcgtcagcgtcaccaaagaggggagggctgtagtcctc
acctcacacagtatggaggaatgtgaggctctctgcaccagaatggccatcatggtgaac
ggcagattccagtgtcttggatctgtacaacacttgaagaacaggtttggtgatggctac
accattgttctccgtctgatggacaacatgtcggagccggcctcgtgccccatcagcagc
ttcatgcagagctctttccccagcatcgagctgaaggagcgccaccagagcgtgctgcag
ttccagctgccctcacacgcctgctgcctggctcgggtcttcgaggttctggccaacaac
cacgaggagctgggcatcatcgacttctcggtttcacagaccactctggaccaggtgttt
gtcaactttgccaaagagcagaaggatgacgacgtcctcactgatgttatcatcagcaac
agtacagtacagaccaaactgaccactttggttaacagggttaaccctcccaccatcctt
ccactgccgcccatcactccccctcagccgagcaagagcccgcagcagcccgcaaaatca
tctggcagcaaacccaaggaggggaaatcaaaaaatcccaaacctggcatggtgaaatct
aaagagggcaaagctaattgggaaaagagcagcagcatggcaatgacacaaatacctcag
aaagaggagaaggctcagaggacgagccggagggccagcggtggatcagacagcagttct
ggtggagctcagggagaaactagtcaatccagtaaacgcaaagcagagagctccagtcaa
aatccctctgcactgttcatagtcgacggcaacacacaggacagcgcactgtga
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integrated database retrieval system
