Notothenia coriiceps (black rockcod): 104962059
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Entry
104962059 CDS
T04920
Symbol
usp30
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 30 isoform X1
KO
K11851
ubiquitin carboxyl-terminal hydrolase 30 [EC:
3.4.19.12
]
Organism
ncc
Notothenia coriiceps (black rockcod)
Pathway
ncc04137
Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:
ncc00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
104962059 (usp30)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ncc01002
]
104962059 (usp30)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ncc04131
]
104962059 (usp30)
04121 Ubiquitin system [BR:
ncc04121
]
104962059 (usp30)
Enzymes [BR:
ncc01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
104962059 (usp30)
Peptidases and inhibitors [BR:
ncc01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
104962059 (usp30)
Membrane trafficking [BR:
ncc04131
]
Autophagy
Mitophagy
Other mitophagy associated proteins
104962059 (usp30)
Ubiquitin system [BR:
ncc04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
104962059 (usp30)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UCH
UCH_1
DUF5700
Motif
Other DBs
NCBI-GeneID:
104962059
NCBI-ProteinID:
XP_010788752
UniProt:
A0A6I9PKP7
LinkDB
All DBs
Position
Unknown
AA seq
505 aa
AA seq
DB search
MLWCRPESSDKLVKEFLGSGQIVRNKMIKNWGVIGGVAAAVAAGVYVLWGPITDRRKRKR
GMVPGVLNLGNTCFLNSLLQGLAACPSFIRWLETVIGLPPTQSCNQDNQLSTTLLQLLNG
LSRDEPGEEDVLDAGCLLDVLRLYRWHISSFEEQDAHELFHVLTSSLDEERDRQSKIVPL
FDMQSLESIPDQDEKTMTCRSRAPLHPIPSPWKSQNPFHGCLTSNMSCKRCEQQSPVRYD
SFESLSLSIPLPQWGRPVSLDQCLQHFISSETIKEVDCENCTKLQQGTSVNGEVLGSQRT
TFVKQLKLGKLPQCLCIHLQRLTWSNEGSPIKRPEHVQFTEYLSMGRYKHNAHTHRSQRI
KCALNPKKAEGSDDSTEKLSANGTGAEHPDNNNKPFSNGTFSSVFLQSPGLNPQHGFTND
FSSTEYLFQLTAVLVHHGDMHSGHFVTYRRSPCSARPSSPFSSQWLWVSDDSVRKASLQE
VLSSNAYMLFYERVRRLDLAPRSEE
NT seq
1518 nt
NT seq
+upstream
nt +downstream
nt
atgttgtggtgcagacctgaaagctctgataagcttgtgaaggagtttcttggctctgga
caaatcgtcagaaacaaaatgataaagaactggggtgtcatcgggggggtagctgctgcg
gttgcagctggagtctatgtgttgtggggcccaattacagatagaaggaagagaaagaga
ggtatggttcctggtgtgttgaacttaggcaacacctgcttcctgaactctttgcttcag
ggtttggcagcatgtccgtctttcatccggtggctggagacggtaataggattgcctcca
acccagtcctgcaatcaggacaatcagctgtccacgacactgctccagctactcaatggt
ctgtccagagacgagccgggggaagaagatgttctcgatgccgggtgcctcctggatgtt
ctccgactgtaccgctggcacatcagttcctttgaagagcaggatgcacatgagctcttt
catgttcttacgtcttctctggatgaggagcgggatcgtcagtcgaaaatcgttcccttg
tttgacatgcagtccctcgagagcattcctgatcaagatgagaaaactatgacctgcaga
agtcgagcccctctgcatccgataccaagtccttggaagtctcagaatccttttcatggt
tgtttaacaagcaatatgtcatgcaagcgctgcgaacaacaaagtccggtgcggtacgac
tcatttgagagcctttccctgtccatccctttgcctcagtggggtcgacctgtctctcta
gatcagtgtcttcaacattttatctcttcggaaaccatcaaagaagtggattgtgaaaac
tgcaccaagcttcaacaagggacctcagtaaatggcgaagttcttggaagccagaggaca
acatttgttaaacagcttaaactgggaaagctcccccaatgcctctgcatccatttacaa
aggctgacgtggtccaacgaaggctcccccatcaagagaccggagcatgtgcagtttaca
gagtatctctcgatgggccgctacaaacacaacgctcacacacacagaagtcagcggatc
aaatgtgctctgaaccccaaaaaggcagaaggttcagacgattccacggaaaagctctcg
gctaacggcactggagcagagcatccggacaacaataacaaacctttttccaacggaaca
ttttcctctgtgtttcttcagtctcctggcttgaacccacagcacggcttcacaaatgac
ttcagttctacagagtaccttttccagctcacggccgtgctggtgcaccacggcgacatg
cactcgggacacttcgtgacgtaccgccgcagcccctgctcagcccgcccctcctcaccc
ttcagctcccagtggctctgggtgtccgacgactcggttcgaaaagccagcctccaagag
gtgctgtcgtccaacgcctacatgctcttctacgagagagtccggaggctggacctcgct
ccgcgctcggaggagtaa
DBGET
integrated database retrieval system
