Notothenia coriiceps (black rockcod): 104962073
Help
Entry
104962073 CDS
T04920
Name
(RefSeq) low-density lipoprotein receptor-related protein 4-like
KO
K20051
low-density lipoprotein receptor-related protein 4
Organism
ncc
Notothenia coriiceps (black rockcod)
Brite
KEGG Orthology (KO) [BR:
ncc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ncc04131
]
104962073
Membrane trafficking [BR:
ncc04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
104962073
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ldl_recept_a
Ldl_recept_b
FXa_inhibition
EGF_CA
cEGF
EGF_3
Motif
Other DBs
NCBI-GeneID:
104962073
NCBI-ProteinID:
XP_010788767
UniProt:
A0A6I9PKR3
LinkDB
All DBs
Position
Unknown
AA seq
1035 aa
AA seq
DB search
MGGGLLLCAGLLLCAVLLQLSGSLQVSAGSSPLKCVLGSKLCRDASECVSYRHVCDGESD
CKDGSDEDFCATACSEDQFQCAHGKKCIAKQQLCDGVAQCQDRSDELLCPEGSEGCDHRC
DESRCLPRTFLCDGERDCVDGTDEDNCVSPLEEQDSELDEGTLPTPAPSSGLSTPIKCAL
GFRPCVDLKECVLYKHVCDGEADCSDGSDEHECSSACEADQFQCAHGKKCIPLSQVCDGV
SQCQDRSDEMSCTHQTDGCKHQCDDNNRCLPSSFLCDGENDCLDESDEANCVDEGCSPTD
FTCSSGQCVSAQMLCDGHPDCGDRSDEESCVAPPVCSTKHRCPLSKECLVEEWICDGDLD
CKDGSDEKDCPVSAEICGKFQWSCKSKTKCIPSSWKCDGTKDCHDGSDESECEVWCPSHQ
FPCGSQGCVSWSLVCNGVTNCADGSDEGGSCSSLCEDTRRCSQICFSTPQGPRCGCSLGF
RLLPDALSCTDVDECESSSPPVCSQLCINTEGSYRCDCEQGYIMEAGRHHCKITGEPFLL
ASVHTDIFLYGLRSGGLDILSSSAQKAILSLDYDWRQQRVLWVSLDTEGIQWSSLDHKTS
GTLIKGLRADSVAVDWLGRNLYWIDGVNGKISAIKLSSEPVKSSDHSVILDEDLDLPRSL
ALLPQKGLMFWTEIGNVPKIERSGMDGSERRVVVNSSLGWPGGVALDPISERVYWTDERL
RAIGSTTLDGEDIRILQMKETTNPFSLAVFNDMLYWSDAKKRVVFAANKNSGKDREIVLK
RLNQPFSVKIIHPLLQTGFESPCENIVCSHMCVLAPGPKAVCKCPPRLLLAEDGLTCSSL
VDSDFLLMLSPSTVTQIYLQSRHSSSDLKGWPEHVALQVPSVNEAAILDFNLRDDTLFLT
DEATTSLSSFKLKGLDLSSEGVFLKLLGNSITAMAVDWITGSVFWSSSTQTHLQVTSSTA
AHTAVLLKEGVERVGSIALHPPTGIVCFTNLGLQGSTVECSNMDGDQRKVVWKDAEQPTS
LVFSSSGDSIYWADT
NT seq
3106 nt
NT seq
+upstream
nt +downstream
nt
atgggtggaggtttgcttctgtgtgcaggtttgcttctgtgtgcagtcttattgcagctg
tcagggtccctgcaagtgtctgcaggaagtagccctctgaagtgtgtcctcggctctaag
ctgtgcagagacgcctccgagtgtgtttcctaccgacatgtgtgtgacggagagtctgac
tgcaaggacggctctgatgaagacttctgtgcaacagcatgcagcgaagatcagttccag
tgtgctcacgggaagaagtgcatcgcgaagcagcagctgtgtgacggggtggctcagtgt
caggaccgatccgatgagctgctctgcccagaggggagcgagggctgcgaccaccggtgc
gacgagagccgctgcttaccgagaaccttcctctgcgacggggagagggactgcgtggac
gggaccgatgaggacaactgcgtatctccactagaggaacaggactctgaactggatgaa
gggaccctccctacccctgcaccctcctccggcctctcgacccccataaagtgtgctctg
ggcttcagaccgtgcgtggacctgaaggagtgtgtgctctataaacatgtgtgtgacgga
gaggcagactgctccgacggctctgatgagcacgagtgctcctcagcatgtgaagcagat
cagttccagtgcgctcacgggaagaagtgcatccctctgagccaggtgtgtgatggcgtg
tctcagtgtcaggaccggtccgatgagatgagctgcacccatcagacggacggctgcaaa
caccagtgtgacgacaacaaccgctgcctccccagcagcttcctgtgtgacggagagaat
gactgcctggacgagagcgatgaggccaactgcgtggatgaaggctgcagtcccacagac
ttcacctgctccagtgggcagtgtgtgtcggctcagatgttgtgtgacggacacccggac
tgcggggaccggtcggatgaagagagctgcgtcgcgccccccgtctgcagcaccaagcac
cgctgccccctcagcaaggagtgcctggtggaggagtggatctgtgacggagacctggac
tgcaaggacggctccgacgagaaggactgtccggtgtctgcggagatctgtgggaagttt
cagtggtcgtgtaaatccaagacgaagtgcatcccttcctcctggaagtgtgacggcacg
aaggactgccacgacggcagcgacgagagcgaatgtgaggtgtggtgcccctcccaccag
ttcccctgtggcagtcaggggtgtgtgtcctggtctcttgtgtgtaacggcgtcactaac
tgcgccgacggatcagacgagggcggcagctgcagctctctctgcgaggacacccggcgc
tgctctcagatctgtttcagcacgccgcagggaccgcgttgcggctgctcgttgggcttc
aggctccttccggacgctctgagctgcactgatgtggacgagtgcgagtccagcagcccg
cccgtctgcagccagctgtgcatcaacaccgaggggtcatacagatgtgactgtgagcag
ggatacatcatggaggccggaagacaccactgcaagatcaccggcgagcccttcctcctg
gcctcggtgcacacggacatcttcctgtacggtctgcgcagcggaggtctggacatcttg
tcctcgtcggctcagaaggccatcctgtctctggactacgactggaggcagcagagggtc
ctgtgggtcagcctggacacagagggcatccagtggtcctccctggaccataagaccagc
gggaccctcatcaaagggctgcgtgcggactctgtggcggtggactggctcggcaggaac
ctgtactggatcgatggcgtgaacggaaagatctctgccatcaaactgagctcagaacca
gtgaagtcctcggaccacagcgtgatcctcgatgaagacctggacctgcctcgctctctg
gctctgcttcctcagaaagggctgatgttctggacggagatcggtaacgtgccgaagata
gagcgctcggggatggacggttctgagcggagagtcgtggtgaactccagtctgggctgg
ccgggcggcgtggctctggacccgatctctgagagggtctactggaccgacgagaggctg
agggccatcgggtccaccacgctggacggagaggacatccggatcctgcagatgaaggag
accaccaacccgttctcgctggctgtttttaacgacatgctgtactggtctgacgctaag
aagagagttgtgttcgctgctaataaaaattctgggaaagaccgagaaatcgtcctgaag
agactcaatcaacctttcagcgtgaagatcatccacccgttgcttcagacgggctttgag
agtccctgtgaaaacatcgtctgttcccacatgtgtgttttggccccggggcccaaagcc
gtgtgcaaatgtccccctcgtctcctattggctgaggacggcctgacctgctccagcctc
gtcgactctgacttcctgttgatgctttcgccctccaccgtcactcagatctacctgcag
tccagacactcctcatcagatctgaagggctggcctgaacacgtcgccctgcaggtgccc
agcgtcaacgaggcggctatcttggacttcaacctccgagacgacactttgtttctgacg
gacgaggccacgacttccctcagctctttcaaactcaagggcttagacctgtcctcagag
ggcgtgttcctgaagcttctgggtaactccatcactgccatggctgtggactggatcaca
ggcagtgtgttctggagcagcagcacgcagacccacctgcaggtgacctccagcaccgcg
gcccacaccgcggtcctcctgaaggaaggtgttgagcgggtggggtccatcgccctccat
cctcccactggaatagtgtgcttcactaacctgggtctgcagggctccacggtagagtgc
tccaacatggacggggatcagaggaaagtcgtgtggaaagatgccgagcagcccacgtct
ctggtgttctccagcagcggggactccatctattgggccgacaccg
DBGET
integrated database retrieval system
