Notothenia coriiceps (black rockcod): 104962274
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Entry
104962274 CDS
T04920
Symbol
sox7
Name
(RefSeq) transcription factor SOX-7
KO
K09270
transcription factor SOX7/8/10/18 (SOX group E/F)
Organism
ncc
Notothenia coriiceps (black rockcod)
Brite
KEGG Orthology (KO) [BR:
ncc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ncc03000
]
104962274 (sox7)
Transcription factors [BR:
ncc03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
104962274 (sox7)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HMG_box
Sox17_18_mid
HMG_box_2
HMG_WDHD1
YABBY
Ccdc124
Motif
Other DBs
NCBI-GeneID:
104962274
NCBI-ProteinID:
XP_010789005
UniProt:
A0A6I9PMX4
LinkDB
All DBs
Position
Unknown
AA seq
392 aa
AA seq
DB search
MAALISAYSSWPESFECPPGDGDASDAHGPQRTPADKAPEPRIRRPMNAFMVWAKDERKR
LAVQNPDLHNAELSKMLGKSWKALTPPDKRPYVEEAERLRVQHMQDYPNYKYRPRRKKQL
KRICKRVDPGFLLSGLAPDQNALPEQRVLCHPLDKDEGSLRSGFSSPSPLPGVRSFRDPA
PSSSSFDTYPYGLPTPPEMSPLDAMDHEHVPPSYYSTSCSSSSSCPDDHHQSQTHMGSPP
PYHTDYSQSQIHCGGAHMGHISLMSQGGGGLIPVPLSYYSSSSFHHIHHGLHQGHLGQLS
PPPETQGHLETLDQLSQAELLGEVDRDEFDQYLNSNGPGFPPEQSSSLTVTGHIQLTSPS
AGSAPPSSSTEPSLISVLADATAAYYNNYGIS
NT seq
1179 nt
NT seq
+upstream
nt +downstream
nt
atggcagccctcatcagcgcgtactcgtcgtggccggagtccttcgagtgtcctccagga
gacggggacgcgtctgacgcacacggcccgcaaaggacccccgcggacaaggcgccggag
ccgcgcatcagacggcccatgaacgcgttcatggtctgggccaaagacgagcgcaagaga
ctggcggttcaaaacccagacctgcacaatgccgagctcagcaaaatgttgggcaagtcc
tggaaggccctgaccccccctgataagaggccctatgtggaggaggcagagaggctccgg
gtgcagcacatgcaggactaccccaactacaagtatcggcctcgcaggaagaaacagctg
aaacgcatctgcaagcgggtggaccccggcttcctgctgagcgggctggccccagatcag
aacgccctgcccgagcagagggtcctctgtcaccccctggacaaagacgagggcagcctc
aggagcggcttctccagccccagcccgctgcccggcgtcagaagcttcagagacccggcc
ccctccagcagtagctttgacacctacccctacggcctgcccaccccccctgagatgtcc
cccttagatgccatggaccacgagcatgtccccccttcttattattccacatcttgtagt
tcctcttcctcctgcccagatgaccaccaccagagtcagacacacatgggcagcccgccc
ccgtaccacactgactattctcagagccagatccactgtgggggcgcacacatgggtcac
atctctctcatgtcccaaggtggtgggggactgatccccgtcccgctgtcttactacagt
agctcatctttccaccatatccaccacgggctccaccagggacacctgggtcagctgtcc
cccccaccagagacccagggtcacctggagactctggaccagctgagccaggccgagctc
ctgggtgaggtggaccgcgatgagtttgaccagtacctgaactccaatgggcccgggttc
ccccccgagcagagcagcagcctgactgttacaggacacatccagctgacgtctcccagt
gctggttctgcccctcccagcagctccacagaacccagcctcatttcagttctcgcagac
gcaacggcagcctactacaacaactacggcatctcgtaa
DBGET
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