Notothenia coriiceps (black rockcod): 104962380
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Entry
104962380 CDS
T04920
Symbol
arpc1b
Name
(RefSeq) actin-related protein 2/3 complex subunit 1B
KO
K05757
actin related protein 2/3 complex, subunit 1A/1B
Organism
ncc
Notothenia coriiceps (black rockcod)
Pathway
ncc04144
Endocytosis
ncc04517
IgSF CAM signaling
ncc04530
Tight junction
ncc04810
Regulation of actin cytoskeleton
ncc05100
Bacterial invasion of epithelial cells
ncc05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
ncc00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
104962380 (arpc1b)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
104962380 (arpc1b)
09144 Cellular community - eukaryotes
04530 Tight junction
104962380 (arpc1b)
09142 Cell motility
04810 Regulation of actin cytoskeleton
104962380 (arpc1b)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
104962380 (arpc1b)
05100 Bacterial invasion of epithelial cells
104962380 (arpc1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ncc04131
]
104962380 (arpc1b)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ncc04812
]
104962380 (arpc1b)
Membrane trafficking [BR:
ncc04131
]
Others
Actin-binding proteins
Arp2/3 complex
104962380 (arpc1b)
Cytoskeleton proteins [BR:
ncc04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Arp2/3 complex
104962380 (arpc1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_EML_2
Beta-prop_THOC3
Beta-prop_WDR3_1st
WD40_WDHD1_1st
Beta-prop_WDR5
WD40
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_RIG_2nd
ANAPC4_WD40
Beta-prop_CAF1B_HIR1
WDR55
WD40_Gbeta
Beta-prop_WDR35_TULP_N
Beta-prop_WDR19_1st
Beta-prop_IFT140_1st
Beta-prop_Aladin
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR3_2nd
Beta-prop_HPS5
EIF3I
Beta-prop_IFT122_1st
WD40_MABP1-WDR62_1st
RMC1_N
Beta-prop_WDR75_1st
Beta-prop_TEP1_2nd
eIF2A
PEP5_VPS11_N
WD40_MABP1-WDR62_2nd
WDR90_beta-prop_4th
Beta-prop_SPT8
Motif
Other DBs
NCBI-GeneID:
104962380
NCBI-ProteinID:
XP_010789125
UniProt:
A0A6I9PNA5
LinkDB
All DBs
Position
Unknown
AA seq
380 aa
AA seq
DB search
MAYHSFLLEPISCHAWNKDRTQIALCPNNHEVHIYKKDGTQWNRIHELKEHNGQVTGIDW
ATESNRIVTCGADRNAYVWTLKEGTWKPTLVILRINRAARCVKWSPKENKFAVGSGSRLI
SICYFEQENDWWVCKHIKKPIRSTILSLDWHPNNVLLAAGCCDFKCRVFSAYIKEVEEKP
GPTPWGSKMPFGEMLFESSESGAADQTVAGAGGWVHGVCFSHSGNRLAWTSHDSTVSVAE
GGKTSTVNSLRSETLPLLCVTFITENSIVAAGHDCYPVLFVYDGAKASLTFGGKLDVPKQ
AAQKGISARERFQNLDRRASETQSTEKDLNTLHKNSISQISVLEGGRNKCAKFCTTGMDG
GMGIWDVKSLASAMKDLKIV
NT seq
1143 nt
NT seq
+upstream
nt +downstream
nt
atggcgtaccacagtttcctgctggaaccaattagctgccatgcctggaacaaagatcgt
acccaaatcgccttatgccctaacaaccacgaggtccacatctacaagaaggatgggacc
cagtggaacaggatccatgagctgaaggagcacaatgggcaggtgacaggtatcgactgg
gccacagagagtaaccgtatagttacttgtggagcagaccgtaacgcctacgtgtggacc
ctgaaagagggcacatggaagcccaccctggtcatcctcaggatcaaccgcgctgcccgc
tgtgtgaagtggtctccaaaagagaacaagtttgctgtaggcagcggctcacgcctgatc
tccatctgctacttcgagcaagaaaatgactggtgggtgtgtaagcacatcaagaagcct
atccgctccaccatcctcagcctggactggcatcccaacaacgtcctgctggcggctgga
tgctgcgacttcaaatgcagggtgttttcagcctacatcaaagaggtggaggagaagccc
ggccccactccctggggcagtaagatgccgttcggagagatgttgtttgagtctagcgag
tctggagcagccgatcagaccgtagctggagccggaggatgggtgcacggtgtgtgtttc
tcacactccggcaaccgtctggcctggacctcgcacgactccactgtgtctgtcgctgag
ggaggcaagactagcacggtgaacagcctgaggtctgagactcttcctctgctgtgtgtc
accttcatcactgagaacagcatagtagcagctggccacgactgttacccggtgctgttt
gtctacgacggggccaaagccagcttgacttttggtggcaaactggacgttcctaagcaa
gcggcccagaagggcatcagtgccagggaacgtttccagaacctggaccgtcgggcctca
gagacccagagcacagaaaaggacctgaacaccctgcacaagaacagcatcagccaaatc
tctgtgctggaaggaggaagaaacaagtgcgccaagttctgcaccaccggcatggatggg
ggaatgggcatctgggatgtgaagtcgctggcgtctgcaatgaaggacttaaagatagtc
tga
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integrated database retrieval system
