Notothenia coriiceps (black rockcod): 104962535
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Entry
104962535 CDS
T04920
Name
(RefSeq) transcription factor Sox-19b-like
KO
K16796
transcription factor SOX2 (SOX group B)
Organism
ncc
Notothenia coriiceps (black rockcod)
Brite
KEGG Orthology (KO) [BR:
ncc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ncc03000
]
104962535
Transcription factors [BR:
ncc03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
104962535
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
SOXp
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
104962535
NCBI-ProteinID:
XP_010789284
UniProt:
A0A6I9PEL1
LinkDB
All DBs
Position
Unknown
AA seq
305 aa
AA seq
DB search
MYSMMEHELKPTGQPPSHQTSQGMSPVTGNMTGGMGINGNSHPSSKTACPPGVDPMDKVK
RPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKLLTDAEKRPFIDEAKRLRAVHM
KDYPDYKYKPRRKTKPLLKKDTQVGKYPLSAGNLLVAAQGQGGSPRMDSYGWGPTGGYAG
MQGEALGYTQQLHRYDLSALQYPPAMTAAQSYMNGANSYSPMSYGSSPQQPSPVMSMVKA
EQVSHSPPTGVPNHHRGPLQGDLRDMISMYIPGPGGDGSDPTGAQRGYTSVQQHYLSGTV
PLTHI
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atgtacagcatgatggaacacgagctgaagcccaccggccagccgccttctcaccagacc
tctcagggcatgtccccggtcaccggcaacatgactgggggcatgggcatcaatggcaac
tctcacccgagctccaaaactgcgtgtccccctggagtcgatcccatggataaagtgaag
cggcccatgaacgccttcatggtctggtccagaggacagaggcgcaaaatggcccaagaa
aaccccaaaatgcacaactccgagatcagcaagcgactgggggccgagtggaagctgctg
acggacgcggagaagcggcctttcatcgacgaggccaagcggctccgggccgtccacatg
aaggattaccccgactacaagtacaaaccacgccgcaagacgaagccccttctgaagaag
gacacgcaggtgggcaagtacccgctgtcagcagggaacctgttggtggcggctcaaggc
caaggtggcagtcccaggatggacagctacggctggggccccactggggggtacgccggc
atgcagggcgaggctctcggctacacccagcagctgcaccggtacgacctgtccgccctg
cagtacccacctgcgatgacggcagcacagtcctacatgaacggagccaactcttacagc
cccatgtcctacggcagcagtccccagcagcccagtcccgtcatgtccatggtgaaggca
gaacaggtgtcccactctcctccgactggggtacccaaccaccaccggggccctctgcag
ggggacctcagggacatgatcagcatgtacatccccgggccggggggggatggcagtgac
cccactggagcacagaggggctacaccagcgtccagcagcactacctctccggaaccgtc
ccactgacacacatctag
DBGET
integrated database retrieval system
