Notothenia coriiceps (black rockcod): 104962816
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Entry
104962816 CDS
T04920
Name
(RefSeq) SH3 domain and tetratricopeptide repeat-containing protein 2-like isoform X1
KO
K24313
SH3 domain and tetratricopeptide repeat-containing protein
Organism
ncc
Notothenia coriiceps (black rockcod)
Brite
KEGG Orthology (KO) [BR:
ncc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ncc04131
]
104962816
Membrane trafficking [BR:
ncc04131
]
Protein recycling
Rab GTPases and associated proteins
Rab11 associated proteins
104962816
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_12
TPR_8
TPR_2
TPR_1
SH3_2
SH3_9
SH3_1
TPR_MalT
TPR_7
TPR_10
Motif
Other DBs
NCBI-GeneID:
104962816
NCBI-ProteinID:
XP_010789615
UniProt:
A0A6I9PPK9
LinkDB
All DBs
Position
Unknown
AA seq
1573 aa
AA seq
DB search
MALISGSCCWLLGQMASCCCRPLLHSSCCGPFIKVCLSSFTDISPAELDALWREPPYTLG
EAHVHFSGNDIMTQGEKEDGPMVESGEGGGEPDSYWKKKEAFFRGSTVSLGEKFSSEIEL
LFTGRRRSSMDPDRALQEALRTRLRVVESNSQDVIQLFKDLSARLVSVHAEKDSFVLTFK
TVEEIWKFSTYLALGYVARCLENFLCDQSFWLDPELLSDLQINVTVDEEHLATLYLGLLL
QEGSFFAKALFTRTDMDEDDEEQLAFNKNDLLMVRDTGQDNMWEGTKLSTGNHGLVPVNS
MQPLPYPFYQWFLRKYPGNAGYSPAEKELFEHSIVTGSCEAIVDYSPVGMDELQLSQGDI
VEIQGLLVRGLAVFIGTHTSTGHTGFVHKAHVKPLDSKPLDRRLVFLTEEERASLAQVKP
CSSEAGDSSLLERLFSTDISSVYRLDRLDETDFTYIRNRPKHDHKVSAGARQSVMSEKSG
GTPPYHSSPRTSLSHSSPRLSIYQSHNPLPREGERLSFTLVDTFRELDEYREDPPLFVEE
NSWEGEDSEFSDPTLTLLNHEHFQEDFLPLYDLQYSFLWVTFGGKTEDELPGYLESVREC
AKRLGLHWAHRRACFLLGRLCARKLKFSQARVYYEEALSVRVDSFSDTPFLIALFTNLTS
VYLKQRMTDKLPQTLEKASALLLCLPCHTFTSTDEAELLHLLLRRSVVMGDKHLEARVCY
LLSSLFLLLRKTDDALPFVERLQFLSVTLSTTEGRPIAPLDLNWLLSWLYNRKYMPYLAL
ASLSLDSRQDHSLGDAFQKIELFIRNSVRLNPCWKEGTSLLPAQIVIYLQQALIIAEQEE
DLKTQRDLCQGLATVYQQYDALDKAVRCAQQAVETGGHINEEEGFEASVMLGWLLVLTGQ
AEKAQNVLQPLLTSLQGTDSPTQRGVIHNLLALCLRRQDCIPEAGWHLYSALVISRESGN
QRNQALALANLGCLALDVGASLVAERFLVRSLRLFLELWESPTDEEHVQTYLWLGRSYRD
RKKSQDSRACYEMGLLIALHARNLHSQMVVAKVLSRLYADMLLYGQSIVYYEHCVSVSRE
LKEKRLEGEYLEILSSLYLSLNTERSSRKSLDCTKQSLRISIDLGKREEESETWLQVGRI
YYLIHEDELADMYLQAAVKTALRMNDHHFAMSIYEEAGDVYFKGTRNRMASLPFYRDGGL
PFARSIKDIHSEFCLLSKLTELLMNQGEQEEALQYATLAVEVASKTGVHLHERTAYHRLA
TVYYSLQQYEMAENYYLKSLSFCPPVMQDPKEARYFTNIYCRLGNLTLHKLKDSFDAVGY
FQLALAAALEDQANPEALYVVYMKLAEIHCNHMPDAQLCQVYRDRAQSLKRVLAGEDGAA
EKNMEDAETQSGRENEEEANADKEHTESSVKRNSIIMSTPEKCEDNSFPRTCTIHGDTED
RCSDTNGKIEHSIDSGSLLMNAFGSEKETIGSQSYSDSILTESFDTAKEQISDSSSSSDT
LQTNRNQTDGKDFDTDHFMPSQTPEDPTSDITTHINAQNTDSDIQNEKNTTAKETDVHAE
KDVSVEDNWCDTD
NT seq
4722 nt
NT seq
+upstream
nt +downstream
nt
atggcattgatctctgggagctgctgctggctcctgggccagatggcgtcttgttgctgc
agaccgctgctccactcctcttgctgtggacccttcatcaaagtctgcctctcctccttc
acagacatctctcctgctgagttggatgctctttggagggaaccaccatatactcttggg
gaagcacatgtacacttctcaggaaatgacatcatgactcaaggtgagaaggaggacggt
ccaatggtggagtcaggtgaaggcggaggggagcctgacagctactggaagaagaaagag
gcattcttcagaggaagtactgtgtcactcggagagaaattctcctcagaaattgagctg
ctgttcactgggaggaggcgctccagcatggatccggaccgggccctacaggaggcgctg
cgcacccgactccgagtggtggagagcaacagccaggatgtgatccagctctttaaagac
ttgtctgcacggctggtgtctgtccatgctgagaaggacagcttcgtactcactttcaag
actgtggaggaaatctggaagttttcaacgtacctagccttaggttatgttgctcgctgc
ttggagaacttcctgtgtgatcagtccttctggctggacccagagctgctcagcgacctg
cagatcaacgtgactgtggacgaggaacatctggccacactctacctgggactgttactc
caggagggttccttctttgcaaaggcgctttttacaagaactgatatggatgaggatgac
gaagagcagctggcgttcaataagaacgacttgctgatggtgagggacacggggcaggac
aacatgtgggagggcacaaagctctccacaggaaaccacggtctggtgccggtcaactcc
atgcaaccgctgccttaccccttctatcagtggttcctgaggaagtaccctggcaacgct
ggatactcgccagcagaaaaggaactatttgaacattctatagtgacaggctcctgtgaa
gcaatagtcgactacagtccggtgggcatggatgagcttcagctgagtcagggggacatt
gtggagatccagggtctgttggtccgaggcctggccgtgttcatagggacacacacgtcc
acaggtcacaccggcttcgtacacaaggcccatgtgaagcctctggactccaaaccacta
gacagacggttggtctttctgacggaggaggagcgggccagtctggctcaggttaagccc
tgcagctctgaggcgggggacagcagcctgctggaaagactcttctccactgacatcagc
tctgtgtacaggctagacagactggatgaaacggacttcacgtacattaggaaccgacca
aaacatgatcataaggtttctgcgggcgcccgtcagagcgtaatgtcagagaaaagtgga
gggacacccccgtaccattcctctcctcgcacctccctctcccactcctcccctcgcctg
tctatctatcagtcccacaatcctctgccacgagagggggagcgcctgtccttcactctg
gtcgacacgttcagagaactggacgagtacagggaagacccgcctctcttcgtggaggag
aacagctgggagggggaggactctgagttcagtgaccccacattgaccctgctcaaccat
gaacacttccaggaggacttcctgcctctgtacgacctgcagtattccttcctttgggtg
acctttggtggtaagactgaggacgaactaccgggttatctagagagtgtcagggagtgt
gccaagaggttgggcttgcactgggcacatcgacgggcatgctttctcctgggaagactc
tgtgccaggaagctgaagttctcccaggcccgtgtgtactacgaggaggctctcagtgtt
cgagtggacagtttctcagacacaccgttccttatcgcactcttcaccaacctcacctct
gtctacctgaagcagcgtatgactgacaaactgccccagactctggagaaggccagtgcc
ctgctcctctgtctcccctgccacaccttcacctctacggacgaagcagaacttcttcac
ctgctcttgaggagatcagtggtgatgggggacaaacacctggaggctcgcgtttgctac
ctcctctctagcctcttcttacttctcaggaagactgacgatgcccttcccttcgttgag
cgactccagtttctctctgtgactctttctaccacagagggtcgtcctatagcgcctttg
gacctcaactggctcttgagttggctctataatcgtaaatacatgccttacttagcgctg
gcttccctgagcctggactcaagacaagaccactcccttggcgatgctttccagaagatt
gagttgtttatcaggaactctgttcgcctgaacccttgctggaaggagggaacttccctg
ctccctgcgcagattgtgatttacctccagcaggccctgattattgctgagcaagaggag
gacctgaagacccagagggacctgtgtcagggcttggccacagtctaccagcagtatgat
gctcttgataaggcggtgcgctgtgctcaacaagctgtggagacaggaggtcacatcaat
gaggaggagggctttgaagcctccgtgatgcttgggtggttgttggtgttgacgggccag
gccgagaaggcccagaatgtcctacagcccctgctcacatccctccagggtacagacagt
cccacgcagcgaggagtgatccacaacctcttggctttgtgtctgaggcggcaggattgc
atcccagaggcaggctggcatctctactctgcattggtcatctcaagagaaagtggaaac
cagaggaaccaggcgctggcactggccaacctgggctgcctggcactggatgtgggggca
tctttggtggcggaacgcttcttggtcagatccttgcgtctttttctggagctttgggaa
agccccacagacgaggagcatgttcagacctacctttggctggggcggagctacagagac
aggaagaagagtcaggacagcagggcgtgttatgaaatggggctactaattgcacttcat
gccagaaacttacacagtcagatggtggtggccaaggtgctgagtcggctgtacgccgac
atgctgctgtacggccagagtatcgtctactatgagcactgtgtgtcggtctccagagag
ctgaaggaaaagagactagagggggagtatctggaaatcctcagcagcctctacctctcc
ctcaacactgaaagatcatcacgtaaatccctggactgcaccaagcagagcctgaggatt
tctatcgatttgggcaagagagaggaagagtcagagacctggctgcaggtgggacgcatc
tattatctcatccacgaggacgagctagctgatatgtacctgcaggcagcagtgaagaca
gccctgaggatgaatgatcatcactttgccatgagcatctacgaggaggcaggagacgtc
tactttaaaggcaccaggaacagaatggcttcactgcctttctacagggatggcggcctg
ccctttgcacgcagcattaaggacatccactcagagttctgtttgttgagtaaactcaca
gagctgttaatgaaccagggcgagcaggaggaggctctgcagtacgctacgctggctgtg
gaggtcgccagcaaaacaggtgtgcatctgcatgagaggacagcctaccaccggctggct
acagtctactacagcctgcagcagtatgagatggcagaaaactactacctcaagtccctg
tccttctgtccacccgtcatgcaggaccctaaggaggctcgctactttacaaatatttac
tgcagacttggcaatctgacactacacaaactgaaggattcttttgacgcggtgggctac
ttccagttggctctggcggcggcgctggaggaccaagctaaccccgaggctctgtatgtg
gtgtacatgaagctggcagagatccactgcaaccacatgcccgacgctcagctgtgccaa
gtttacagagacagagcacagagtctgaagagagttctggcaggagaggacggcgctgct
gagaaaaacatggaggacgcagagacacagtctggtagagaaaacgaagaagaggccaat
gctgataaggaacatacagaaagttctgtgaagagaaacagcattatcatgtctacaccg
gaaaaatgtgaagataactcctttccaagaacttgtacaatccatggagacacagaggat
agatgttcggacactaatgggaaaatagaacacagcattgattcgggaagccttttaatg
aatgccttcgggtctgagaaagaaacaatcggcagtcagtcgtacagtgacagtattctt
acggagtcctttgatacagcaaaggagcagatctcagactccagcagctcctctgacact
ctacaaactaacaggaatcaaacagatgggaaagactttgatactgaccacttcatgcct
agccaaacacctgaagatccaacaagtgacatcacaacacacataaacgcacaaaacaca
gattctgatattcagaatgaaaaaaacacaaccgctaaggaaacagatgtgcatgcagaa
aaagatgtcagtgttgaggacaattggtgtgatactgactga
DBGET
integrated database retrieval system
