Notothenia coriiceps (black rockcod): 104962934
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Entry
104962934 CDS
T04920
Name
(RefSeq) xylosyltransferase 1-like
KO
K00771
protein xylosyltransferase [EC:
2.4.2.26
]
Organism
ncc
Notothenia coriiceps (black rockcod)
Pathway
ncc00532
Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
ncc00534
Glycosaminoglycan biosynthesis - heparan sulfate / heparin
ncc01100
Metabolic pathways
Module
ncc_M00057
Glycosaminoglycan biosynthesis, linkage tetrasaccharide
Brite
KEGG Orthology (KO) [BR:
ncc00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
104962934
00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
104962934
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
ncc01003
]
104962934
Enzymes [BR:
ncc01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.2 Pentosyltransferases
2.4.2.26 protein xylosyltransferase
104962934
Glycosyltransferases [BR:
ncc01003
]
O-Glycan biosynthesis
Glycosaminoglycan
104962934
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Xylo_C
Branch
Motif
Other DBs
NCBI-GeneID:
104962934
NCBI-ProteinID:
XP_010789749
UniProt:
A0A6I9PG00
LinkDB
All DBs
Position
Unknown
AA seq
504 aa
AA seq
DB search
FIRKQGLDRLFFECDTHMWRLGDRKIAEGISVDGGSDWFLLNRMFVEYVINSKDDLVTSM
KRFYSYTLLPAESFFHTVLENSAHCESMVDNNLRITNWNRKLGCKCQYKHIVDWCGCSPN
DFKPADFHRFQQTVRPTFFARKFEASVNQEIVNQLDSYLYGTFPQGTQGLNSYWENVYDE
PDGVASLSDTQLTYFHSFSRLGLARAAASLQGNPKDHSCRYFPMGHPVSVHLYFQADQFQ
GYLVKHHATNLATSKLETMETWVAPKKNFRLTTPASSTFSRLQLAEIGTEWDAKERMFRN
FGGLMGPMDETVGMQKWSKGPNVTVTVVWIDPTNVIAATYDILIDAGAEFTHYRPPLNLP
LRPGVWSVRILHHWSPVAEMRFLIAPLTYSKRQPIRQEDTLKLHNGPTKNSYMEQSFHGL
NPVLNIPVSLGFVEQAKRNAALTGPELERWSDSLVGEMWEAADVCAVGPTACPVMQACPK
NPWSSLSPDPKSHMGVAREDGRIR
NT seq
1516 nt
NT seq
+upstream
nt +downstream
nt
gtttatccgtaagcagggtctggaccgtctgtttttcgaatgcgacacccacatgtggag
actgggcgaccgtaaaatcgcagaaggcatctctgtggatggagggtccgactggttcct
cctcaaccgcatgtttgtggaatatgtcatcaactcaaaggacgacctggtcaccagcat
gaagcgcttctactcctacactctgctgccggccgagtcgttcttccacacagtgctgga
gaacagcgcccactgtgagagcatggtggataacaacctgcgcatcaccaactggaaccg
caaactgggctgtaagtgccagtacaagcacatcgtggactggtgcggctgctcccccaa
tgacttcaagcctgccgacttccaccgctttcagcaaacggtgcggcccaccttctttgc
caggaagtttgaggccagcgtgaaccaggagatagtgaaccaattggactcctacctgta
cggaaccttcccccaggggacgcagggcctgaactcctactgggagaacgtttacgacga
gcccgatggtgtggctagcctctcggacacgcagctcacgtacttccactctttctcgag
gctgggtctggcccgagcggccgcctctctgcaggggaacccaaaggatcacagctgcag
gtacttccccatgggtcatccggtgtcagtgcatctctacttccaggcagaccagttcca
gggctacctggtgaagcaccacgccaccaacctggcaacgagcaaactggagaccatgga
gacctgggtggctcccaagaagaactttaggctaaccacgcctgccagcagcacattcag
caggttgcagcttgcagagattggcactgagtgggatgccaaagagcgcatgttcagaaa
ctttggcggcctgatgggccccatggacgagacggtgggcatgcagaagtggagcaaggg
gcccaacgtcaccgtcacggtcgtgtggatcgaccccaccaacgtcatcgcggccaccta
tgacatcctgatcgacgcgggggcagagttcactcactaccgcccgccgctcaacctgcc
gctgcggcccggcgtgtggagcgtccgcatcctgcaccactggagccccgtggccgagat
gcgcttcctcatcgccccgctgacctacagcaagcgccagcccatacgacaagaggatac
tctgaagctccacaacgggcccactaagaacagctacatggagcagagtttccacggcct
caacccggtgctcaacatcccggtcagcctgggcttcgtggagcaggccaaaaggaacgc
ggccctgaccggccccgagctggagcgctggtcagacagcctggtgggcgagatgtggga
ggcggccgacgtctgcgccgtgggccccaccgcctgccccgtcatgcaggcctgccctaa
gaacccctggagttccctgagcccagaccccaagtcccacatgggagtggcgcgcgaaga
cgggcgcatcaggtag
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