Notothenia coriiceps (black rockcod): 104962957
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Entry
104962957 CDS
T04920
Symbol
recql4
Name
(RefSeq) ATP-dependent DNA helicase Q4
KO
K10730
ATP-dependent DNA helicase Q4 [EC:
5.6.2.4
]
Organism
ncc
Notothenia coriiceps (black rockcod)
Brite
KEGG Orthology (KO) [BR:
ncc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ncc03032
]
104962957 (recql4)
03400 DNA repair and recombination proteins [BR:
ncc03400
]
104962957 (recql4)
Enzymes [BR:
ncc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
104962957 (recql4)
DNA replication proteins [BR:
ncc03032
]
Eukaryotic type
DNA Replication Initiation Factors
Other initiation factors
104962957 (recql4)
DNA repair and recombination proteins [BR:
ncc03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecQ family DNA helicases
104962957 (recql4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Drc1-Sld2
zf-CCHC
zf-CCHC_3
Helicase_C
ResIII
Motif
Other DBs
NCBI-GeneID:
104962957
NCBI-ProteinID:
XP_010789781
UniProt:
A0A6I9PX51
LinkDB
All DBs
Position
Unknown
AA seq
1261 aa
AA seq
DB search
MDRYNDVKIQLKTWEQGFVTDHQRKPNKEDIDQAADETRNLYKEYRSLKQAKDNSSSDAA
SGHVEQARSTAAVNTPQKDCWGSHLNRSSQPAPSPKLTAEERDNLQASAQYYGMKLKNNM
GTLGKERPVSLKKSFLPGRVPLNSLKDGLTGQTNSPVATPVKNPFNGPRSSPFTPRRFNT
PQGLASKTPQKAEPEEPCEPFESVKDSCEKPASAAISYSSPSVLSSKSCTSKVISSQNQN
ISHLAPSPARSASLLSSLSSPSRLGTLRGDVGATGKLNESIGALGDKEEHVDNFRTPHKV
DDEAGVGALISLRGGPQVIAGFRGGMAGKPSPASRLSFVDKKWLERCQVFGEMGAEVKPG
AGNVEIDVEKRGECEEGRETTFKTDEEEKSGKEEIHVAEERRAAKVSGEVKEPKSITHDK
TVSESEPEPSLQHTGKSHQRKRKGKAKEKEDIEEMERGPTPPLTPEEDNEESNKSKGGKK
KGKKRQREAEHMDAEAPEEGGVKKRRRNGKKKEESSDGKPSTAPQGGRKKRSKKKGDEDE
EAEEEKKTKEPTKLPQENLLGEIEEDYKARKAYKTQPAKVKGMKGAEGNFVKINLKKKSH
VKGYALRGAGLRKQIYMEKFQLKGERFGGHGFLSRGGGGGFRGGGHRGGFRGGMSQSGDT
CYKCGGTGHWAIHCKGPAPPPSAAEDQAAEEEPFDLPTLEEVARATGTLQPQPMAASSSA
AEEQPSQDKQGDGNTKDEVLLNVIRPDYECPVVPPPMEPMFPLTDDGKVQEAPPELYEAL
KELGYRSFRPGQAEAIMRILSGLSTLVVLSTGMGKSLCYQLPAYMYAKRSNSITLVISPL
VSLMDDQVSGLPANLKAACIHSNMSKKQREAAIEKWMMPRTSDLSRPMPNATVATTSRSS
PHMKLFWTRRRSEEDKPAWITPCRQVLSSAEMRVVSSLRVQQVQVRRHCRRSDCDAVFIV
DVQMSCDVHSSGKCGRSCLETLLCYLELHPQRFVELLHPTLSVCKIGCYSGPKQLQKLTK
ICPPIAVVLARRRMAGERVETCDQLEFDVVEVADTMGWQLSLVKRGLRQLQWSSVGGRSG
VSVELSSISFYFRSFGDLSDEEMDRVCQFLYNRVQNQEKTQIYQLTSSFKAFKSVAFPSA
SSCVDDLDESRSLRLKDLLSDYFDKRRDLSQMLAPVYIEELDKYKFSDWENQIRADIRSF
LSNRSDEKFSGRAVARILHGIGSPCFPAQIYGRDRRYWRKYIQFDFNQLIRLATQEIIHF
K
NT seq
3786 nt
NT seq
+upstream
nt +downstream
nt
atggatcgatacaacgatgtaaaaattcagctgaaaacctgggagcaggggtttgtcaca
gaccaccagaggaaaccaaacaaggaggacattgatcaagctgcagatgagaccaggaac
ctgtataaagagtaccgcagtttgaaacaagccaaagacaacagcagcagtgatgcagcc
agcggacacgttgaacaggccagatctacagctgcggtcaacacaccacagaaggactgt
tggggatcccatctgaaccgcagttcacagcctgcaccttctcccaaactgacagccgag
gagagagacaatctgcaggcctctgcccaatactatggcatgaaactgaaaaacaacatg
gggacactcggtaaggagagacctgtctcactgaagaaatcgttccttcctggtcgggtg
cctcttaactccctgaaagatggactaactggacagacgaacagccctgttgcgacccct
gtgaagaaccctttcaacggacccagatccagccccttcacaccaagaagatttaacaca
ccccagggcctggcttcaaagacaccccagaaggcggagcctgaagagccgtgtgaaccc
tttgaatccgtcaaagattcttgtgaaaaacctgcaagtgctgctattagttatagtagt
cctagtgttctaagtagtaagagttgtactagtaaagttattagttcacaaaatcagaat
atctctcatctagctccctctccagccagatctgcttcactgttgtcatcattatcttct
ccaagtaggctaggaactttaagaggagacgtaggagccacgggcaaattaaatgaaagt
ataggagctttaggagacaaagaagaacatgtggacaatttcagaactcctcataaggtt
gatgatgaggcaggtgttggagctttgatcagcttgaggggaggccctcaggttattgct
ggcttcagaggaggaatggcagggaagccctctcctgctagcagattgagttttgttgac
aagaagtggctggagaggtgtcaggtgttcggagagatgggggctgaggtgaagcctgga
gcaggcaacgtggagatagatgtggagaaaagaggagagtgtgaagagggaagagaaaca
acatttaaaacagatgaagaggagaaatctggaaaagaagaaatacacgtagccgaagaa
agaagagcagcaaaagtctcgggagaagttaaagagcctaagagcattacccatgacaaa
acagtgagtgaaagtgaaccagaaccttctctacaacacactggaaaaagccatcaaagg
aaaaggaaagggaaagcaaaagagaaggaagatattgaggagatggaaagaggaccgaca
ccacctttaacgccagaagaggacaatgaggagagtaacaaatccaaaggtggaaagaag
aaagggaagaaaaggcagagagaggcagagcacatggacgcagaggcgccagaggaggga
ggagtgaagaagaggcggaggaatggtaagaagaaagaggagagctctgatggaaagccc
agcacagctccacaaggagggaggaaaaagagatccaagaaaaaaggagatgaagacgag
gaggcagaagaagagaaaaaaaccaaggaaccaacaaagcttcctcaagagaacttgtta
ggagaaatagaggaggactataaagccaggaaggcgtataaaactcagcctgccaaagtc
aaaggcatgaaaggggcagagggtaactttgtgaagataaatctgaagaagaaatcccat
gtcaaaggatacgctctcagaggtgctggtctacgcaaacagatatacatggagaagttc
cagctgaagggcgaacgcttcggtggacatggatttcttagcagaggaggagggggtggt
ttcagagggggaggacacagaggaggtttcagaggggggatgagtcagtcgggggacacc
tgctacaagtgtggagggacgggacactgggccatccactgcaagggaccagcccccccc
ccttctgctgccgaggaccaggccgctgaggaggagccgtttgacctgcccaccttagag
gaggttgccagggcaacaggcacactgcaacctcagccgatggcagcgtcttccagtgca
gcagaggagcagccgtcccaggataagcagggtgacggtaacactaaagacgaggtgttg
ctgaacgtgattcgtcctgactatgagtgtcccgttgttccacctccaatggaaccaatg
tttcctctcacagatgatgggaaagtccaggaagcgcctcctgagctgtatgaagccctg
aaagaactcggctatcggtcatttagacccggacaagcggaagctatcatgaggatcctg
tcaggtctctctaccctggtagtgttgtcaacaggaatgggtaaatcgttgtgctatcag
ctcccagcctacatgtatgctaagcgatcgaatagcatcactttggtcatttcccctcta
gtctcactaatggatgaccaggtgtctggcctgccagccaatctgaaggcagcctgtatt
cactccaacatgagcaagaaacagagagaagctgcgatagaaaagtggatgatgccgcgg
acatcagacttatccaggcccatgccaaacgccacagtggccaccacaagtcggagctcc
ccgcacatgaagttgttctggacgcgacggcgctctgaagaagacaagccggcatggatc
accccttgcaggcaggtcctgagcagcgctgaaatgcgagtggtctcctctcttcgagta
caacaggtgcaggttcggaggcactgccgcagatcggactgcgatgccgtctttatcgtt
gatgtccagatgtcgtgcgatgtccatagcagtggaaagtgtggccgtagctgtttagaa
acgctgctctgctatctggagctgcacccccagcgctttgtggagctgctccaccccact
ctgtctgtgtgtaaaatcggctgctatagtggacccaaacaactccagaaactcaccaaa
atttgccctcccattgctgtggtgttggccagaaggcggatggcgggcgagcgagtggag
acgtgtgatcagctggagttcgatgtcgttgaggttgcagacactatgggatggcagcta
tctcttgtgaagagaggactccgacagctgcagtggtcctctgttggaggccgtagcggt
gtcagcgttgaattgtcttccatatcgttctacttccgatcctttggcgacctcagcgac
gaggagatggacagagtgtgtcagttcctctataatcgagtccagaaccaggagaaaacg
cagatctaccagctcacctcctccttcaaggccttcaaaagtgttgcatttccgagtgca
tcgtcctgtgtcgacgacttggatgagagtcgcagtctgaggctgaaagaccttctgtcc
gattacttcgacaagaggcgggacctaagccagatgctcgcaccggtgtacatcgaggag
ctcgacaaatataagttttcagactgggagaatcagatcagagcggacatcagaagtttt
ctctccaaccggagtgatgagaagttttctggaagagctgttgctagaatcctccacggc
ataggcagcccttgttttcctgctcagatctacggcagggaccggcgctactggaggaag
tacatccagtttgacttcaaccagcttatcagactggccactcaggagatcattcacttc
aagtga
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