Notothenia coriiceps (black rockcod): 104962971
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Entry
104962971 CDS
T04920
Symbol
ctr9
Name
(RefSeq) RNA polymerase-associated protein CTR9 homolog
KO
K15176
RNA polymerase-associated protein CTR9
Organism
ncc
Notothenia coriiceps (black rockcod)
Brite
KEGG Orthology (KO) [BR:
ncc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ncc03021
]
104962971 (ctr9)
Transcription machinery [BR:
ncc03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
PAF1 complex
104962971 (ctr9)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_1
TPR_2
TPR_14
TPR_19
TPR_16
TPR_8
TPR_CcmH_CycH
TPR_12
TPR_17
TPR_10
TPR_7
TPR_11
TPR_6
ARM_TT21_5th
TPR_Slam
ARM_TT21_4th
ANAPC3
TPR_EMC2
ARM_TT21_C
HAT_PRP39_N
Motif
Other DBs
NCBI-GeneID:
104962971
NCBI-ProteinID:
XP_010789805
UniProt:
A0A6I9PQ54
LinkDB
All DBs
Position
Unknown
AA seq
1137 aa
AA seq
DB search
MSRGSIEIPLRDTDEVIELDFDQLPEGDEVISILKQEHTQLHIWIALALEYFKQGKTEDF
VKLLEAARIDGNLDYRDHEKDQMTCLDTLAAYYVQQARKEKNKDAKKELITQATLLYTMA
DKIIMYDQNHLLGRACFCLLEGDKMDQADAQFHFVLNQSTNNIPALLGKACISFNKKDFR
GALAYYKKALRTNPGCPAEVRLGMGHCFVKLSKLEKARLAFGRALELNSKCVGALVGLAV
LELNSKEPDSIKNGVQLLSRAYTIDPSNPMVLNHLANHFFFKKDYSKVQHLALHAFHNTE
VEAMQAESCYQLARSFHVQEDYDQAFQYYYQATQFASSTFVLPFFGLGQMYVYRRDKENA
AQCFEKVLKAYPNNYETMKILGSLYATSDDQDKRDIAKGHLKKVTEQYPDDVEAWIELAQ
ILEQTDIQGALSAYGTATRILQEKVQADVPPEILNNLGALHFRLGNLGEAKKYFLASLER
AKAEGEHDEHYYNAISVTTSYNLARLYEAMNEFHEAEKLYKNILREHPNYVDCYLRLGAM
ARDKGNFYEASDWFKEALQINQDHPDAWSLIGNLHLAKQEWGPGQKKFERILKQPSTQND
TYSMLALGNVWLQTLHQPTKDREKEKRHQDRALAIYKQVLRNDSKNLYAANGIGAVLAHK
GFFREARDVFAQVREATADISDVWLNLAHIYVEQKQYISAVQMYENCLKKFFKYQNTEVL
LYLARALFKCGKLQECKQMLLKARHVAPSDTVLMFNVALVLQRLATLVLKDEKSNLKAVL
SAVKELELAHRYFSYLCKAGDKMRFDLALASSEARQCSDLLSQAQYHVARARKQDEEEKE
LRAKQEQERDILRQQMMKERTDRRNKQVEEQKKLLEQRALYVEKTKGLLSFAEGSKEMGK
EKRKGGGRRKKGDIDEFVNDDSDEEKELRKKKRRKGGSDDEEGGSRPKRQRKPKERKRMD
RSQPERLPPSLKGKIKSKAMISSSDSSSDEDGLKIAEEKQQKDSGSGSDDDGGHKKRIAS
ESESDGGKNRSGSEAGSPRRSADSPRRSADSPRRSAGSDDSGSDRPVKKRRVQRQSDSEQ
SDIESKKSRSGSEDESRPASPAAVSERGSEAGSDNEGSPRRSNNASEREASNNDDSD
NT seq
3414 nt
NT seq
+upstream
nt +downstream
nt
atgtctcggggatccatcgaaatccctttacgggacaccgatgaggtcatcgagcttgac
tttgaccagctgcccgaaggagacgaggtcatcagtatcctgaagcaggagcacacacag
ctgcacatctggatcgctctggcgttggagtacttcaagcagggcaaaactgaggatttt
gtcaagcttttagaggcagctcgtatcgatggaaaccttgactacagagaccatgagaag
gaccagatgacctgtctggacacattggcagcttattatgtccagcaagcgcgtaaagag
aaaaacaaagatgccaagaaagagctcatcacgcaggccacgctgctgtacacgatggca
gacaagatcatcatgtatgatcagaaccatttgttgggacgagcctgtttctgcctgctg
gaaggagacaagatggaccaggccgacgctcagttccacttcgtcctcaaccagtccacc
aacaacatccctgctttgcttggtaaggcctgcatctccttcaataaaaaggacttcaga
ggagcactggcttactacaaaaaggctctgcgtacaaaccccggctgcccagccgaggta
agacttggaatgggacactgttttgtgaagctcagcaaactggagaaggctcgtttggcg
tttggtcgagccctggagctgaactcaaaatgtgtgggagctctcgttggtttggcggtt
ttagagctcaacagcaaggagcccgattccatcaagaacggcgtgcagctcctatcgcgc
gcctacaccatcgaccccagcaaccccatggtgctcaaccacctggccaaccactttttc
ttcaaaaaggattacagtaaagtgcagcatctggctcttcacgctttccacaacacagag
gtggaggccatgcaggctgagagctgctaccagttagctcgctccttccacgttcaggag
gactatgaccaagcgtttcagtattactaccaagccactcagtttgcctcgtccaccttt
gtgttgcccttctttggcctgggacagatgtatgtgtatcgaagagacaaggagaatgct
gcgcagtgcttcgaaaaggttttgaaggcctaccccaacaactatgaaactatgaagatc
cttgggtctctctacgcgacatctgacgatcaggacaaaagagacatcgccaaaggtcat
ttgaagaaggtgacggagcagtacccagacgacgtggaggcgtggatcgagctggctcag
atcctggagcagaccgacattcagggagcgctgtctgcgtacggcacggccacccgcatc
ctgcaggagaaggtgcaggccgacgtgccgcccgagatcctcaacaacctcggggctctt
cacttcagactgggaaacctcggagaagcaaagaaatactttctcgcatctctggagcgg
gccaaggctgagggggagcacgacgagcattactacaacgccatttctgtcaccacctcc
tacaatctggcccgcctgtatgaggcaatgaatgaattccacgaggctgagaaactctac
aaaaacatcctgagagagcatcctaactacgtggactgttatttgcgtctcggagcgatg
gctcgcgacaaaggcaacttctatgaagcctctgattggttcaaagaggccctgcagatc
aatcaggatcaccccgatgcctggtccctgatagggaaccttcacttggccaaacaggaa
tggggtccgggtcagaagaagtttgagcgtattctgaagcagccgtccactcagaacgac
acctactccatgctggctctgggaaacgtgtggctgcagaccctgcaccagcccaccaaa
gaccgggagaaggaaaagagacaccaggaccgagccctggccatatacaagcaagtcctc
cgaaatgactctaaaaacctctacgctgccaatggcatcggtgccgtcctcgctcacaag
ggcttcttcagagaggctcgtgacgtgtttgcgcaggtgagggaggccacagctgacatc
agtgacgtgtggctgaatctggctcacatctatgtggaacagaagcagtacatcagcgct
gtgcagatgtacgagaactgcctgaaaaagtttttcaagtatcagaacacagaggtgctg
ctgtaccttgcgagggcgctcttcaaatgtgggaagctccaagagtgcaagcagatgctc
ctgaaggcccgccacgtggcgcccagcgacacggtgctgatgttcaacgtggcgctggtg
ctccagaggctggccacgctcgtgctgaaagacgagaagagcaacctgaaggctgtgctc
agcgctgtcaaagagctggaactggctcacaggtatttcagttacctctgcaaggctggc
gacaagatgaggtttgacctcgctctcgcttcctctgaagccaggcagtgctctgatctg
ctcagtcaggctcagtatcacgtggcgagagcaaggaagcaggatgaggaggagaaggag
cttcgtgccaaacaagaacaggagagggacatacttcgtcagcagatgatgaaagaacgg
acggataggcgcaacaaacaggtggaggaacagaagaagctgttggagcagagagctttg
tacgtggagaagaccaagggcctgctcagctttgcagagggatcaaaggaaatgggcaaa
gaaaagaggaagggcggtggacgtcgcaagaaaggcgacattgatgagtttgtcaacgat
gactctgacgaggagaaggaactgaggaagaagaagaggagaaagggcggcagtgatgat
gaggagggaggatcgcggcccaagaggcagcgtaaacccaaagagcgcaagaggatggac
aggtcccagcctgagcgcctaccaccgtctctcaaaggaaagatcaagtccaaggcgatg
atctcctcttctgattcttcttcagatgaagatgggctgaagatagctgaagagaaacaa
caaaaagacagtggttcagggtctgatgacgatggcggccacaagaagcgcattgcgtct
gagagcgagtcagatggaggtaagaaccgctcgggcagcgaggcgggcagcccccggcgc
tctgcggacagcccccggcgctctgcggacagcccccggcgctctgcggggtccgatgac
tctggtagtgaccgtccggtgaagaagaggagggtgcagcgacagtctgactccgagcag
tctgacattgagagcaagaagagtcggtcgggatcggaagacgagtcccggcccgcttcg
cccgccgcagtgtcggagcgaggatctgaggcggggtccgacaacgagggctccccccgc
cgctccaacaacgcctctgaacgggaagcctccaacaatgacgacagcgattaa
DBGET
integrated database retrieval system
