Notothenia coriiceps (black rockcod): 104962987
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Entry
104962987 CDS
T04920
Symbol
kars
Name
(RefSeq) lysine--tRNA ligase isoform X1
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
ncc
Notothenia coriiceps (black rockcod)
Pathway
ncc00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
ncc00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
104962987 (kars)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
ncc01007
]
104962987 (kars)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ncc03016
]
104962987 (kars)
Enzymes [BR:
ncc01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
104962987 (kars)
Amino acid related enzymes [BR:
ncc01007
]
Aminoacyl-tRNA synthetase
Class II (A)
104962987 (kars)
Transfer RNA biogenesis [BR:
ncc03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
104962987 (kars)
Prokaryotic type
Other AARSs
104962987 (kars)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
tRNA-synt_2d
DUF374
Motif
Other DBs
NCBI-GeneID:
104962987
NCBI-ProteinID:
XP_010789833
UniProt:
A0A6I9PRD0
LinkDB
All DBs
Position
Unknown
AA seq
611 aa
AA seq
DB search
MLCLVRAAGQQLCQAFAVRGQWLKYASPCTAAVHAHMYGIRWRGDKSELKRQMKAEKKAS
EKEARVKEQLDLKNESNDTGAEDACALDEETLDPNQYFKIRSQAIQELKGTAEDPYPHKY
HVDLSLTEFIEKYNHLQPGEQLTEAALLNVSGRVHAKRASGAKLIFYDLRGEGVKLQVMA
NSSSYKSEEAFVAINNKLRRGDIIGVRGIPGKTKKGELSIIPTEMTLLSPCLHMLPHLHF
GLKDKETRFRQRYLDLILNDYVRQKFITRAKIITYLRSFLDQMGFLEIETPMMNIIPGGA
VARPFVTYHNDLDMNLFMRIAPELFHKMLVVGGMDRVYEIGRQFRNEGIDLTHNPEFTTC
EFYMAYADYHDLMEITEKLLSGMVKHITGGYKVTYHPDGPEGKAFEIDFTPPFRRLSLTG
DLEKIMGEKFPPTDSYDSEETRKFFDELCAKKGVECPSPRTTARLLDKLVGDYLEVTCIN
PTFICEHPQIMSPLAKWHRSQKGLTERFELFVMKKEICNAYTELNDPVRQRELFEQQAMA
KAEGDDEAMFIDETFCTALEYGLPPTAGWGMGIDRVAMFLTDSNNIKEVLLFPAMKPDDN
KTSAPTEGTSV
NT seq
1836 nt
NT seq
+upstream
nt +downstream
nt
atgctgtgcctggtcagggcagccgggcagcagctgtgccaggcctttgctgtcagggga
cagtggttaaaatatgcatccccatgtacagctgcagtccatgcacacatgtacgggatc
cgttggagaggtgacaaaagtgagctgaagagacaaatgaaagctgaaaagaaggcgtct
gaaaaagaagccagggtgaaggagcagttggatctaaaaaatgaatccaatgatacagga
gccgaagatgcctgtgcgttggatgaggagacgcttgacccaaatcaatactttaagatc
cgctcgcaggccatccaggaactgaagggcacagcagaggatccgtaccctcacaagtat
catgtagacttgtcactcacagagttcatcgagaaatacaatcatctacagcctggagaa
cagctgacagaagctgctctcctcaatgtgtcaggccgtgtccatgccaagagggcttct
ggtgccaagctgattttctacgacctgcgaggtgaaggcgtcaagttgcaagtcatggcc
aactcaagtagctacaagtctgaggaggcctttgtggccataaacaacaaactgcgtcgc
ggcgatattatcggtgtccgtggtatcccagggaagacaaaaaaaggggagttgagcatc
atccccaccgagatgacacttctttcaccatgtttgcacatgttgccccacctccacttt
ggcctcaaagacaaggaaaccagattccgccagcgctacttggatctgattctcaatgac
tatgtgaggcaaaagttcattactcgcgccaaaatcatcacatacctgcgcagcttcctg
gaccagatgggatttttggagattgaaacaccaatgatgaacattattcctggtggagcc
gtggcccgtccgtttgtcacctaccacaatgacctggatatgaacctgttcatgaggatc
gcgcctgagctcttccacaagatgcttgtggttggtggaatggacagagtgtatgaaatc
ggtcgtcagttcagaaatgaaggcatcgatcttacccacaatccagagttcaccacctgt
gaattctacatggcatatgcagattaccatgacttgatggaaatcacagagaaacttctc
tcaggaatggtgaagcacatcactggaggatacaaggtgacttatcaccctgacggtcct
gaggggaaggcctttgagatcgacttcacgccgccattcagaagactgagcctgactgga
gacctggagaagatcatgggagagaaattccctcctactgacagctatgacagtgaagag
acacgtaaattctttgacgagctgtgtgcaaagaaaggagttgaatgtccgtcacccaga
accactgctcgtctccttgacaagttggttggagattaccttgaggtcacctgtatcaac
ccaacattcatctgtgaacatcctcaaatcatgagtcccttggcgaaatggcaccgatcc
cagaaaggcctgacggagcgttttgagctctttgtaatgaagaaggaaatctgcaatgct
tacaccgagttgaatgatcccgtcagacagagagagcttttcgagcagcaagccatggcc
aaagctgagggtgatgatgaagccatgttcatcgatgagaccttctgcacggctctggag
tacggactgccaccgacagccggctgggggatgggcatcgatcgtgtcgccatgttcctc
accgactccaacaacatcaaggaggtgttgctcttcccagccatgaagcctgacgacaat
aagacatcagcgcccacagagggcacctccgtctaa
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