Notothenia coriiceps (black rockcod): 104963028
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Entry
104963028 CDS
T04920
Symbol
srek1
Name
(RefSeq) splicing regulatory glutamine/lysine-rich protein 1 isoform X1
KO
K13165
splicing regulatory glutamine/lysine-rich protein 1
Organism
ncc
Notothenia coriiceps (black rockcod)
Brite
KEGG Orthology (KO) [BR:
ncc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ncc03041
]
104963028 (srek1)
Spliceosome [BR:
ncc03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR proteins
104963028 (srek1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_5
RBD_DEAH11
RRM_3
Motif
Other DBs
NCBI-GeneID:
104963028
NCBI-ProteinID:
XP_010789881
UniProt:
A0A6I9PXG0
LinkDB
All DBs
Position
Unknown
AA seq
478 aa
AA seq
DB search
MSGIPGTAVVQVTNLSSAVSSEQMRTLFGFLGDIDELRLYPPDNAPLSFSSKVCYIKYRD
PSSVCVAQHLTNTVFIDRALIVVPCAEGKIPEEAKALSLLAPTAPTPSLIPGGGLLPIPT
PAPLQNLNVPAVSRLSAALDPTASSLTQAPLMGNVDPSKVDEIRRTVYVGNLNSQTTNAD
QLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFVGQESVNRALTFNGVMFGDRPLKVNHSN
NAIVKPPEMTPQAAAKELESVMKRVREAQCTIAAAIDPADLKKCSPSRSRRLCRSRSRSR
SRSRSKMHRKRSRSKQSRPAPKLCPKNDSHNSRSGHRRSSLSRDKKHSRSRSRGHRRKSK
DRSRSPRRKARSPSPKSFFRGRKDKRRERSRDRKERSTSRKRSRKDEERMKIKAKPMKVE
RDYDREEKDEYESDREDMLSEDMMSSPCAQQNGSYKTHNEYASMGADNNKELFHRHGN
NT seq
1437 nt
NT seq
+upstream
nt +downstream
nt
atgagcgggataccagggactgctgtcgtccaggttaccaacctgtcctcggccgtgagc
agcgagcagatgcgcaccctgtttggcttcctgggagacatcgacgagctgcggctctac
ccgcccgacaatgcccctctgtctttctcgtccaaagtgtgctatataaagtaccgggac
ccctccagtgtttgtgtggcgcaacatctcaccaatactgtttttattgacagagctttg
atagtggtgccatgtgcggaagggaaaatcccagaagaggccaaagccttgtctcttttg
gcgcctaccgctccaacacctagtctgattcctggtggggggctgctaccaattcctact
cccgctccccttcagaatctgaacgtccctgcagtgagtcggctgtcagctgctctggac
cccacagcatcatcgctcacccaggccccactcatgggaaatgtggacccctcaaaagtg
gatgagatcaggaggaccgtctatgttggcaacttgaactcacagacgaccaatgcagac
cagctgctggagttcttcaagcaggtgggcgaagtgaagtttgtgcgaatggctggagat
gagacccagccgacacgcttcgccttcgtagagtttgttggccaggagtccgtcaacaga
gccctgaccttcaatggagtcatgttcggagacagaccgctgaaggtgaatcattccaat
aacgccatagtcaaacccccagagatgacgccacaggctgcagctaaggagctagaaagt
gtgatgaagagggtgagggaagcacagtgcaccattgctgctgccatagatccagctgac
ttaaagaaatgctcccccagtcgctctcggagattatgtcgctcccgctcacggtcaaga
tcccgctctcgctcaaaaatgcacaggaaaagatcccgctcgaaacaaagcagaccagcg
ccaaagttgtgtcccaagaatgactcccacaattcccggagcggccacaggaggagctct
ctctcccgagacaagaaacatagtcgcagtcgctctaggggccataggaggaagagtaag
gatcgctcaaggagcccccggaggaaagcaaggtcaccctccccaaaaagctttttcaga
ggaaggaaagacaagaggagggagcgcagcagggacaggaaggagcgctcaacatccagg
aagaggagccgcaaggacgaggagaggatgaagatcaaggccaagccaatgaaggtggaa
agggactacgacagggaagagaaggacgaatatgaaagtgacagagaggacatgctcagt
gaggacatgatgtcatcaccctgcgcccagcagaacggcagctacaagactcacaatgaa
tatgcatcaatgggtgcggacaacaacaaggaactattccatcgccatggaaactaa
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