Notothenia coriiceps (black rockcod): 104963391
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Entry
104963391 CDS
T04920
Name
(RefSeq) spectrin beta chain, non-erythrocytic 4-like
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
ncc
Notothenia coriiceps (black rockcod)
Pathway
ncc04517
IgSF CAM signaling
ncc04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ncc00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
104963391
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
104963391
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ncc04812
]
104963391
Cytoskeleton proteins [BR:
ncc04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
104963391
Intermediate filaments
Intermediate filament-binding proteins
104963391
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spectrin
PH
PH_9
PH_4
Motif
Other DBs
NCBI-GeneID:
104963391
NCBI-ProteinID:
XP_010790276
UniProt:
A0A6I9PQ01
LinkDB
All DBs
Position
Unknown
AA seq
1561 aa
AA seq
DB search
MLMARDTARDEAQKLHRKWLKHQAFMAELARNKEWLAKIEQEGQELIQEKPELRSVVQQK
LVEIRECWSDLESTTKAKARQLFENNKPEPAVKSFSDLDNQLSHLEQQPPQLEQAHHLPT
FNEQLQKFQAMESQIGDYYKDVGELGSVQGVCLPQRGLMASDREAGEQSGVVETRIVRLI
EPLKERRRILLASKEMHQVAQDLEDEILWIQERLPLASCKDYGNNLQSVQQHVKKNQTLQ
RELTGRRARVEEVLDRAGIIASLRTPEVECVREGAGHVRQLWEVLQLEAERRCMMLDAML
LSQQYYSDAAKVETWLSGQKLQLVNEEKGTDEASTLQLLKGHLALEQTVENYAETVGMLT
QQCQLLMEMGHPESEQLTKQQSHIDRLYVSLKDMVEHRKNKLEQQYWLYQLNKDVEELEK
WITERETVASSTELGHDLEDVTVLQERFTKFATETNSIGQQRMEHVNKMVNEMIDCGHSD
AATIAEWKDGLNESWADLLELMETRRQMLLASHQLHKFFTDCKEVLAQIAGKMKQLPEVR
ACQANITNPATLQRLMHSFEHALQLLVAQVRQLQENAAQLRTIYAGEKAEAIMVKELEVM
EAWKELLSSCEASRVQVTSVTDKVQFFSVVRENLMWMEGIMGQIIWDEPRDLTALEVMMR
QHQELKAKVDGRSKTIQQCADLGKILIAAGNPASEEIQEKLDSLLAKQRDLIEKWDKHQE
KLLRRQEHFQFTQETVKAEAWLKAKEPLITSKEPEGGGARTQTDEVEQLILRHEAFRKAA
VTWKERFSSLRQLSAAEKKKEEEKKATPLSSRRMFPISCLTPSVPSISATSSFLRQTVQV
HVEPKPLQTSLDLGASPATQRLSSTLASYKPVINGSGYHGLEQQGSGKLASSSYLGMNHQ
VPGGGSESAFTALTSQNPGADTYLGINHLPTAGSAESSGYYGLTTGCVGGTPNHLGSGRL
GNSGNIAQHPSSGGMGSPGYLPQQNMGSSGYLAQSPNMGSSGYLGHQPNLGSTGYLAQQP
NLGSTGYLAPQPNLGSTGYLAQQPNMGSSGYLAQPPNLGSTGYLAQQPNMGSSGYLAQQP
NMVSSGYLAQNYQSSGGLGSSGFLAQNNYSSGSLGSSSYLAQSGGIMDPKMAYAWQHLKA
DFMQPRINHIHKAVNPLLEASRAQREQFGDIPMADMVGPESGLELLHGRLQRDPRGSRSD
PQMDHLRREREYKLGRQTSSEQEIQARLNELPLIVRQERYRRRLERQSSSEQEGSGKQRL
QRQDSSDLEGSVKDGSDKRSGDKRNTMAEIVEQVQEREAASARGDSYRPASSLSAPVTRF
DGRPRARDRPKPRRRPRPKEPEETRRSRSAPATGAPTTPQPPSHTAHNEGFLYRKKATSS
DLEAQQRSPNSKSWLNVYCVLKEGQLLFYKDARHLTTTYNEEPPVELANCTFDPSMGYKK
KKNVFILQMADGNNFAFHAKDEEDMKAWTSSITICISEYEELGKWDKPGTSSMEPDHSER
KEKSEGDADARSERSELAEGEERSEKERSEKGDGSEKLDTSEIADKMEGGAGGSSTSGKS
K
NT seq
4686 nt
NT seq
+upstream
nt +downstream
nt
atgcttatggcccgagacactgcgcgggatgaggctcaaaagcttcacaggaagtggctg
aagcaccaggcctttatggcggaactggcccgcaataaggaatggctcgccaagatagaa
caggagggtcaggaactgatccaggagaagcccgagctgcgttcggtggtccagcagaag
ctggtggagatcagagagtgctggtccgacctggagagcaccaccaaggccaaggctcgc
cagctctttgaaaacaacaagcctgagccggcggtgaagagcttctcggacctggacaac
cagctctcccacctggagcagcagcccccccaactggagcaggctcaccatctgcccacc
ttcaatgagcagctccagaaattccaggctatggagtctcagataggggactattacaag
gatgtgggagagctgggcagcgtgcagggtgtctgcctgccccagcgaggcctgatggca
agtgacagggaggccggcgagcagtcaggcgtcgtggagactcgcatcgtccgcctcatc
gagccgctgaaggagagacgccgcatcctgctggcctccaaagagatgcatcaagtcgcc
caagacctggaggatgagatactgtggatccaggagaggcttcccttggcctcctgtaag
gattatgggaataacctccagagtgtacagcagcatgtaaagaagaaccagacccttcag
agggagctgacagggcggcgggctcgtgtggaggaggttctggaccgggcggggatcatc
gcttcgctgaggacccctgaggtggagtgtgtgcgtgaaggggcggggcatgtgcgccag
ctgtgggaggttttgcagctggaggccgagaggaggtgtatgatgctggacgccatgctg
ctgtctcagcagtactacagcgacgcggctaaagtggagacctggctgtcaggtcagaag
ctccaactggtcaatgaagaaaaaggaacggacgaggcgagcaccctgcagctgctgaag
ggccacctggctctggagcaaacagtggaaaattatgcagagacagtaggcatgctcacc
cagcaatgccagcttcttatggaaatgggccacccagaaagtgagcagctcaccaagcag
cagtcgcacatagaccggctgtacgtgtctctgaaggacatggtggagcacaggaagaat
aagctggagcagcagtactggctctatcagctcaacaaggacgtggaggagctggagaag
tggatcactgagcgagagaccgtggccagttccaccgagctgggccacgaccttgaggac
gtcacggtgcttcaggagagattcaccaagtttgccacagaaaccaacagcatcgggcag
cagcgcatggagcatgtcaacaaaatggtgaacgagatgatcgactgcggccactcggac
gcggccaccatcgccgagtggaaggacgggctgaacgagtcgtgggccgacctcttggag
ctgatggagacccgcaggcagatgctgctcgcctcgcaccagctgcacaagttcttcacc
gactgcaaagaggtcttggctcagatcgcagggaagatgaagcagctgccagaggtgagg
gcgtgccaagccaacatcaccaatccagccaccctgcagaggctcatgcactcctttgag
catgcccttcaactgctggttgcacaggtgaggcagctgcaggagaatgcggcccagctg
aggaccatctacgctggggaaaaggcggaggccatcatggtcaaagagctggaagtgatg
gaggcctggaaggagctgctgagctcctgtgaggccagccgtgtgcaggtcacctcagtc
acagacaaggtgcagttcttctccgtggtgcgtgaaaacctcatgtggatggaaggcatc
atgggccagattatatgggatgagcccagagatctgacggctctcgaggtgatgatgaga
caacatcaggagctgaaagccaaagtagacggccgcagcaagaccatacagcagtgtgca
gacctgggcaagatcctcatagctgcaggcaaccctgcatcagaggagatacaagagaag
ctggacagtcttctggctaagcagagggatcttattgaaaaatgggacaaacaccaggag
aagttactgcgcaggcaggaacatttccagttcacccaggagacggtgaaggcagaagcc
tggctgaaggccaaggagccgctgatcacctccaaggagccagagggaggaggagcccgg
acccaaacagacgaggttgagcaactcatccttcgccacgaggccttccgcaaggctgct
gtcacctggaaagaacgcttcagctctctccgccagctttccgcagctgagaagaaaaaa
gaggaggagaaaaaggcaaccccgctctccagccgaaggatgttcccaatatcatgtctg
actcccagtgttccctcaatcagtgctacctcatctttcttgaggcagacggtacaggtt
catgtagaacccaaacccttacagaccagtctggatctgggagcctcccctgcgacacag
agattgtcctcaaccctagctagttacaagccagttataaatggatcaggctaccatgga
ttggaacagcagggcagtgggaagttggcaagctcctcataccttggaatgaaccaccag
gtgccgggaggtggaagtgaatccgctttcactgcactgacttcccagaatcctggagca
gatacttaccttgggataaaccatctaccaactgctggcagtgcggaaagctctggatac
tacggactgactactgggtgtgttggtggtacgccaaaccatctaggcagcgggaggttg
ggaaattcaggtaacatagctcagcatccaagcagtgggggtatgggaagccctggctat
ctgcctcaacagaatatgggcagttctggatatttggctcaatcaccaaatatgggaagt
tctggatacttgggacatcagcctaatctagggagtacaggatatttggcacaacagcct
aatttaggaagtacaggatatttggcaccacagcctaatttaggaagtacgggatatttg
gcgcagcagcctaatatgggtagttctgggtatttggcacaaccgcctaatttggggagc
actgggtatttggcacaacagcctaacatggggagttctgggtatttagcacaacagcct
aatatggtgagttctggatacttagcgcagaattaccagagcagtgggggattgggtagc
tcaggctttctggcacaaaataattacagcagtggaagcctgggcagttctagttacctg
gcgcaaagcggtggcatcatggaccctaaaatggcatatgcatggcagcatctgaaagct
gacttcatgcagcccaggatcaaccacatccacaaggctgtaaaccccctcctagaggcc
agcagggcgcagcgggaacagtttggggacatcccaatggccgacatggtggggccagag
tcggggctggagctcctccacggccgcctccagagggatccccgtggcagccgctcggat
cctcagatggaccacctgaggcgagagagggagtacaagttgggtagacagacctccagc
gaacaagagatccaggctaggctgaacgagctgccgctgattgtgcgtcaggagcgctac
cggaggcgcctggagaggcagtcgtccagcgagcaggagggcagcggcaagcagaggctc
cagaggcaggactcgagtgacctggagggctctgttaaggacggttctgacaaacgctca
ggggataagagaaataccatggcagagattgttgaacaagtccaggagagagaggcagca
tctgcacgaggagattcttatcgccctgcaagcagcctctcagcaccggtgactcgtttt
gatggacgtcctcgggcccgagaccgccccaaaccgaggaggaggcctcgtcccaaagag
cctgaggagacacggcgttctcgctcagctccagctactggggccccaaccacacctcag
ccgccttcacacactgcccacaacgaaggcttcctctaccgcaaaaaggccacatcatct
gaccttgaagctcagcagagaagcccaaacagcaaatcctggctgaacgtgtactgtgtg
ttgaaagagggacagctgcttttctacaaggatgctaggcacctgactacgacatacaac
gaggagcctcctgtggagctggctaactgcacctttgatccttctatgggatacaagaag
aagaaaaatgtcttcattcttcaaatggctgatggtaacaactttgcattccatgcaaaa
gatgaggaggacatgaaggcttggacttcaagcatcaccatctgtatatctgaatacgag
gaactgggcaagtgggacaagccgggaacctcgtccatggaacccgaccactcggagagg
aaggagaagtcggagggggacgccgacgccaggtcagagaggtcggagctggccgagggg
gaggagaggtctgagaaggagaggtcagagaaaggggacggctctgagaagttagacacg
tcagaaatcgccgacaaaatggagggaggggcagggggctccagcacttctggaaagagc
aaatga
DBGET
integrated database retrieval system
