Notothenia coriiceps (black rockcod): 104963426
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Entry
104963426 CDS
T04920
Symbol
chd2
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 2
KO
K20091
chromodomain-helicase-DNA-binding protein 2 [EC:5.6.2.-]
Organism
ncc
Notothenia coriiceps (black rockcod)
Brite
KEGG Orthology (KO) [BR:
ncc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ncc03036
]
104963426 (chd2)
Chromosome and associated proteins [BR:
ncc03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
104963426 (chd2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_Hrp3
CDH1_2_SANT_HL1
Helicase_C
Chromo
ResIII
HDA2-3
ERCC3_RAD25_C
TrwB_AAD_bind
Motif
Other DBs
NCBI-GeneID:
104963426
NCBI-ProteinID:
XP_010790312
UniProt:
A0A6I9PQ40
LinkDB
All DBs
Position
Unknown
AA seq
1467 aa
AA seq
DB search
NSASGESNRSASESGSRSESEHGSERRKSHNSESNSSSESESHSESGSESAGSKSQRTTE
GAKDKPVKKKERLADVKKMWEEHPDVYGVRRSNRSRQEPARLNIGAGGSSGSESESPKRK
TPRKKKENIWKDDDSNDEDEEEEATESSDSEQEEKKVRSRRLPARRPQTKSSTAKKQLSQ
KGKKSRKQESSAEDDDDDDDEDDDEDDDEDDEDGTPKRQTRGRTATKVKSYKEDQHDFET
DSDDLIEMTGDACEEQLDDDSETIEKVMDTRTGKKAATGAPTTMYSVEENGDPNGGFDPE
KDEGETHYLIKWKGWSYIHNTWESMDTMTQQKVKGLKKLDNFKRKHDELSSWMRRASPED
IEFHNCQQELISDLNKQFQFVERIIATKTAKTPGSVDFPSHSHKNPSSDEPEYLCKWMGL
PYSECSWEDGALVGKKFQHCIDSFLSRNSSKTVPSKDCKVLKQRPRFSALKKQPSYIGDE
NLQLRDYQLDGLNWLAHSWCRCNSVILADEMGLGKTIQTISFLSYLFHQHQLYGPFIVVV
PLSTLSSWQREFETWAPDMNVVVYLGDVMSRKSIRDYEWVNHQTKRIRFNALLTTYEIVL
KDKGVLGNINWAFMGVDEAHRLKNDDSLLYKTLMEFRSNHRLLITGTPLQNSLKELWSLL
HFLMPDKFASWEDFDDAHGKGTDNGYQSLHKVLEPFLLRRVKKDVEKSLPAKVEQILRVD
MTAQQKQYYKWILTRNYRALYKGPRGSSSGFLNIVMELKKCCNHSFLIKQPEEVENETQK
EHMLSVVRGSGKLVLLDKLLTRLRERGNRVLIFSQMVRMLDILAEYLAKNRYPFQRLDGS
IKGEIRKQALDHFNAEGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQAQAR
AHRIGQKKQVNIYRLVTKGTVEEDIIERAKKKMVLDHLVIQRMDTTGRTVLDSNSGSTNS
NPFNKEELTAILKFGAGELFKEAEGEESEPQEMDIDEILRLAETRESDQGSSATDELLSQ
FKVANFSSMEEAAPEPLEKPGREWDDIIPEEQRRKIEEEEKQREMDDIFMLPRSRSSNKR
AQANDSDSDVGSKLKNRSSGSESETDDSDDDKKPKRRGRPRARKNNVEGFTDAEIRRFIK
AYKKFGSPLERLEAIARDSELVDKSIADLKRLGELIHTSCVTAVQEHEEHLKENPVEAKG
PGKRRGINIKISGVQVNAKTIIQHEEEFEPLHKVVPSNPAERNQFNLTCRVKVAHFDVDW
DLPDDVQLLLGIYEHGFGNWDLIKTDPDLKLADKILPVDPGKKPQAKQLQARAEHLLKLL
KKEQDNSESKTGEEVKVKKRKPRVKKENKTLKDEQGNDISSPRLSDIPSEEGEVKVSVTF
TSVESRLRNAFLLPAVHVFVALLLLKRCYLNTWLCFVFLPFFSAGTFCCERGNHFLLLLR
INAFNVVTQQSHYNCKPSDNKAKYSFL
NT seq
4405 nt
NT seq
+upstream
nt +downstream
nt
caattcagcctccggagaatccaaccgctctgcgtccgagtcggggagtcggtcagagag
cgagcatggaagtgagcggaggaaatcccacaactccgagtcaaacagctcctcagagtc
tgagagtcactcagagtcagggagcgagtctgcagggtccaaatcacagcgaaccacaga
aggagcaaaagataagccagttaaaaagaaggagcgcctggctgacgtaaagaagatgtg
ggaagaacatccagatgtctacggggtcaggaggtcaaaccgcagtagacaggagccggc
tcgtttaaacattggagctgggggtagcagcggctcagagagtgagagtcccaagaggaa
aacaccccgaaagaaaaaagaaaatatctggaaagatgatgactctaatgatgaagacga
ggaggaggaagctacggagagttcagacagtgagcaggaagagaaaaaagttagatccag
acgacttcctgcaagaagacctcagaccaaatcatcaacagccaaaaagcagctgtctca
aaaaggcaagaagtccaggaaacaggagtcgtctgctgaagatgacgacgacgacgacga
tgaagacgatgacgaggacgatgatgaagacgatgaggacggcactccaaagagacaaac
tcgaggaaggactgcaaccaaagtgaagagttataaagaggaccaacatgactttgaaac
agactcggatgacctgatcgagatgacaggggacgcttgtgaggagcagctggatgatga
cagtgagaccattgagaaagtgatggacaccaggacaggcaaaaaagcagccactggtgc
ccccactacaatgtattctgtggaggagaacggggacccaaatggaggctttgaccccga
gaaggatgagggggagactcactatctgatcaagtggaagggctggtcctacatccacaa
cacatgggagagcatggacactatgacacagcaaaaggtcaagggacttaagaaactgga
caacttcaagaggaaacatgacgagctctcttcatggatgaggagggcgtcccctgagga
tatagagtttcataactgccaacaggagctcatatccgacctgaacaagcagtttcagtt
tgtggagcgtattattgcaacaaaaacagcaaagacaccaggatctgttgacttcccctc
tcatagtcacaagaatccgtcctccgatgagccagagtacctctgtaagtggatgggttt
gccctattcagagtgcagctgggaagatggagctttggttggtaagaagttccagcactg
catcgacagcttcctgagccgaaactccagtaaaaccgtcccatcgaaagactgcaaggt
gttaaagcaaagaccgaggttttctgctctgaagaaacaaccatcgtacattggagatga
aaaccttcagctgagagattatcagctggatgggttgaactggttagctcattcctggtg
caggtgcaacagcgttatcctggcagatgagatggggctcggaaagaccatccagaccat
ctccttcctgtcgtacctgttccatcagcaccagctgtacggacccttcatcgtggtggt
gcctctgtccacgctctcctcctggcagagagagtttgaaacctgggccccggacatgaa
cgtggtggtctacctcggggacgtcatgagcaggaaatcgattcgtgactacgagtgggt
gaaccaccaaacgaagagaatccgcttcaatgcactattaaccacttatgagattgtact
taaagacaagggggtcctggggaacatcaactgggcgttcatgggtgtggatgaagcaca
caggctgaagaatgacgactccctgctgtacaaaacattaatggagttcaggtccaacca
caggctcctcatcaccggcactccgctgcagaactccctcaaagagctctggtccctgtt
gcactttctcatgcctgacaagtttgcttcctgggaggattttgacgatgcgcacgggaa
aggaactgataacggttatcagagtcttcacaaagtcctcgagcccttccttctgcgacg
tgttaagaaagacgtggaaaaatctctccccgccaaggtggaacagatcctccgtgtgga
catgactgcacagcagaaacaatactacaagtggattttaacgaggaattacagagccct
ttacaaaggcccccgaggcagctcctccggcttcctgaacatagttatggagcttaaaaa
gtgctgcaaccatagttttctcataaaacagccggaggaagtagaaaatgaaacccaaaa
ggaacacatgctgagtgtagtgaggggcagtgggaagctggtgctgctggacaagctgct
gacccgactcagagaaagaggaaacagagtcctgatcttctctcagatggtcaggatgtt
ggacattctggctgaatacctcgccaagaatcgctaccccttccagcggctggatggttc
tataaagggggaaatccgaaagcaagcacttgatcactttaatgcagaaggctcagagga
cttctgcttcctgctgtccaccagagctggaggtttggggataaacttggcctcggcaga
caccgtagtgatctttgactctgactggaaccctcagaacgacctgcaggctcaagctag
ggctcacaggatcggacaaaagaaacaggtcaatatttatcgactggtcaccaaaggcac
agtggaggaggacatcatcgagagggcaaagaaaaagatggttttggaccatctcgtcat
tcagaggatggacactactggtcgaactgttctggacagcaactctgggtccacaaattc
aaatccattcaacaaagaagaactgactgccatcctcaagtttggtgcaggggagctttt
caaagaggccgaaggagaggagtctgaaccacaggaaatggatattgatgagatcctgag
attggcagaaacgagagaaagtgaccaaggctccagtgctacggacgaacttctctctca
gtttaaggttgccaatttctccagcatggaagaggccgctccagagccgctggagaagcc
ggggcgggaatgggacgatatcatcccagaagagcagcgacgcaaaattgaggaagagga
gaagcagcgagagatggatgacatcttcatgctgcccaggagcaggagctctaacaagag
ggctcaggccaatgacagtgacagtgacgtcggctccaagctgaagaaccgctcctcagg
ctccgagagcgagactgacgatagcgatgacgacaagaagccgaagaggagaggccgacc
ccgagcccgcaaaaacaacgtggagggtttcactgatgcagagatccgcaggttcattaa
ggcttacaagaaatttggatcaccgcttgaaagattggaggccatcgcaagggactctga
gctggtcgacaaatccatagcagacctgaagaggctcggtgaactcatccatactagttg
tgtgactgcagtgcaggagcacgaggaacaccttaaagaaaacccagtggaagccaaagg
tcctgggaaacggcgaggaatcaacatcaagatctcgggagtgcaggtcaacgccaagac
catcatccagcacgaggaagagtttgagcccctgcacaaagtggtgccctcaaaccctgc
cgagagaaaccagttcaatctgacatgcagggtcaaggtggcccactttgatgtagactg
ggatctgccagacgacgtgcagctcctgctcggcatctatgagcacggctttggaaactg
ggatctgatcaagacggaccctgacctcaaactcgctgataagattctcccagtcgaccc
aggcaagaagcctcaggccaagcagctgcaggcgagagccgagcatcttctgaagctgct
gaaaaaagaacaagacaattcagagtctaaaacaggggaggaggtcaaagtgaagaagag
gaagcctcgggtgaaaaaggagaacaagactctgaaggacgagcagggcaacgacatctc
ctccccccgcctgtccgacatcccgtcagaggagggcgaggtcaaggtcagtgtcacctt
cacgtctgtagagtccaggctgagaaatgcttttctactccctgccgttcatgtgtttgt
agctctgctcctccttaaacgatgttacttgaatacgtggctatgctttgtatttctacc
tttttttagtgctggtactttttgttgcgaacgaggaaaccattttttgcttttactaag
gataaacgcatttaatgtagtgacccagcaaagccattacaactgcaaaccttctgataa
taaagctaaatacagctttttgtag
DBGET
integrated database retrieval system
