Notothenia coriiceps (black rockcod): 104963497
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Entry
104963497 CDS
T04920
Name
(RefSeq) multiple PDZ domain protein-like
KO
K06095
multiple PDZ domain protein
Organism
ncc
Notothenia coriiceps (black rockcod)
Pathway
ncc04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
ncc00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
104963497
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Ortholog
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GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
MPDZ_u10
Motif
Other DBs
NCBI-GeneID:
104963497
NCBI-ProteinID:
XP_010790398
UniProt:
A0A6I9PSW5
LinkDB
All DBs
Position
Unknown
AA seq
1116 aa
AA seq
DB search
MAKVWDEDAAVRAEDADEEALTSGSSFERTITVVKGNSSLGMTVSAMKASLGMLIRSIIH
GGSISRDGRLGVGDLILAINGEPTAHMTNAQARAMLRRHSLIGPDLGSASAPEDDLCPFY
VITYVPAEYLEEYKASLEQTTEEVSDEIHAVPAPDPKDIPNLPEREDGEGEESASYSNWN
QPRKVELFRAPGKSLGISIVGGRGMGSRLSNGEVMRGIFIKHILEDSPAGQNGTLKTGDR
IVEVDGVDLRDASHEEAVEAIRKGGNPVTFLVQSIIHRPRSSRADSGEDRAAAVTKDNKD
KEAYSQSRLFLRLSPTNPFTPTPFKSVKREAVKAPPTSAVLPLPVMPHVGETDTDTLTES
PGGPAEEEEEQRVEQQEEEEEEDEFGYNWKNVSQRYGGLPGVLHMMELEKGRTGLGLSLA
GNRDRSRMSVFVVGIDPNGAAGRDGRMVVGDELLEINGQVLYGHSHQNASSIIKSAPSRV
KIIFVRNTEALQQMAVGPVREQEGRDMEGGDPEEPPTEPETTAANGDTSKYIHHAIKLKE
DGGLGITFVEGNTENGVEIQSISEVRGHTGKEGCMRPGDKLLTVNGESVLGYTVEQVNSL
LRTSKGPVKLTFSSLPSTSEDGDCSDGILPGFPSMHSIAATTLSQPEAEAVMSPSRSSTP
TTLTCDPTTCPIIPGCETTIDIFKGRTGLGLSIVGGCDTLLGAIIIHEVYEEGAASKDGR
LWAGDQILEVNGIDLRVASHDEAINVLRQTPQRVRLVVFRDEAQYKEEDLWDSFSVELHK
QPGQGLGLSIVGRRSRDERNDTGVFVSDIVKGGLVDTDGRLMQGDQILSVNGEDVRTSTQ
EAMAALLKCCVGPINMEVGRFKAGPFHSERRLSQSSQMSENGSTRLVSQADNGPTDPDKP
NMCLDTQEHQETRTVEFTKGPHDSLGVSIAGGVGSPLGDIPIFIAMMNPVGLAAQTQQLK
IGDRIVSICGSSAEGMTHAQAVSLLKSATGTIQLQVVAGGDTSVTGPPPEPPATALTPSC
IFQDDLGPPQYKSINLERGPDGLGFSIVGGYGSPHGDLPIYVKTVFGKGAAAEDGRLKRG
DQIMAVNGQTLEGVTHEEAVGILKRTKGTVTLTVLS
NT seq
3351 nt
NT seq
+upstream
nt +downstream
nt
atggctaaggtttgggatgaagatgctgctgtgagagcggaggacgctgatgaagaagcg
ctgacctcggggagcagctttgaaaggacgatcacagtcgtgaagggcaactccagcctg
gggatgactgtgagcgcgatgaaggccagtctggggatgctgatccgcagcatcatccac
ggcggctccatcagccgggatgggcgtctgggggtcggggatctgatcctggccatcaac
ggagagcccactgctcacatgaccaacgctcaggcccgagccatgctgcgacgacactca
ctcatcggacccgacctgggatctgctagtgcacctgaggacgacctgtgcccgttttat
gtaatcacatatgtacctgcagagtatctggaggagtacaaggccagcctagagcagact
acagaggaagtctccgatgaaatccatgcagtcccagctccagatccgaaagatattcct
aacctccctgagcgggaagatggagagggagaggagagtgcctcttacagcaattggaac
caacccaggaaagtggagctcttccgggcgccaggcaagtctctgggtatcagtattgtc
gggggccgggggatgggcagtcggctgagcaacggagaggtgatgaggggcatcttcatc
aaacacatcctggaggacagtcctgcgggacagaacgggaccctgaagactggagacagg
atcgtagaggtggatggagtagatctaagagatgccagccacgaggaggcagtggaggct
atccgcaagggaggaaaccccgtcaccttcttggttcagagtatcatccacaggcccagg
tcttcgagagcagactccggagaggacagagctgcagctgtgacgaaagacaacaaggac
aaggaggcttacagtcaaagtagacttttcctccgcctctccccaactaaccctttcact
cctaccccatttaagtctgtgaagcgtgaagcggtgaaggcacctcccaccagcgccgtc
ctccccctgccggtgatgccccatgtgggggagactgacaccgacacactgacggagagt
cctggaggacctgcagaggaagaggaggagcagagggtggagcagcaggaggaagaggaa
gaggaggatgagtttggatacaactggaagaacgtctcccagcgttacggcggcctcccg
ggggtcctgcacatgatggagctggagaaggggaggacgggcctgggtctcagcctggcc
gggaacagggaccgctcccgcatgagtgtgttcgtggtgggcatcgaccccaacggggcg
gcgggcagggatggacgcatggtggtgggggacgagctgctggagatcaacgggcaagtc
ctctacggacacagtcaccagaacgcctcctccatcatcaagagcgctccttccagagtc
aaaatcatctttgtcaggaacacggaggcgctgcagcagatggctgtgggaccggtgaga
gagcaggaggggagagacatggaggggggagaccctgaggagccccccactgagccagaa
actactgctgctaacggagacacttcgaaatatattcatcacgccataaagctgaaggag
gacggaggactgggcatcaccttcgtggagggaaacacagagaacggagtggagattcag
agtatatctgaagtgagaggacacacagggaaggagggctgtatgagaccaggggacaaa
ctcctaactgtgaacggggaatcagtgctcggctacactgtggaacaggtgaactctctc
ctgaggacatccaaaggtccggtgaagctcaccttctcgtctctcccgtccaccagtgag
gatggggattgctccgatggcatcctcccaggctttcccagcatgcatagcattgccgca
acgactctgagtcaaccggaggcagaggcagtgatgagtccgagtcgctcctccaccccc
accacgctgacctgtgaccccacgacgtgtcccatcatccccggctgcgagacgaccatc
gacatcttcaagggccgcaccggcctcggcctcagcatcgtggggggctgcgacaccctg
ctgggggccatcattatccatgaagtgtatgaagaaggagctgcttctaaagatggcaga
ctctgggcaggagaccaaatcctggaggtgaacggcatcgacctgcgagtagcgagtcac
gatgaggcgatcaacgtcctgcggcagaccccccagagggtccggctggtggtcttcagg
gacgaggcgcagtacaaggaggaggacctgtgggactccttcagtgtggagctgcacaag
cagccgggacagggcctgggcctgagcatcgtggggaggagatcacgggatgagaggaac
gacaccggagtgtttgtgtctgacattgtgaagggggggctggtggacactgacggacgg
ctgatgcagggcgatcagatcctgtccgtcaacggggaggatgtgaggacgagcacgcag
gaggccatggctgcactgctcaagtgctgcgtggggcccatcaacatggaggtggggagg
tttaaagccgggcccttccactctgaaagaagactctctcagagcagtcagatgagtgag
aatggcagcaccaggttggtctctcaggcagacaacggccctactgaccccgacaaacca
aacatgtgtctagacactcaagagcatcaggagaccaggacagtggagttcactaagggg
ccccatgactctctgggggtcagtatagcggggggcgtgggcagccctctgggggatatc
cccatcttcatcgccatgatgaaccctgtgggcctggctgctcagactcagcagctcaaa
attggggaccgcatcgtcagtatctgtgggagctcggctgaaggcatgacccacgctcag
gctgtcagtctgctgaagagcgccacaggcacaatacagctgcaggtggtagcaggcggc
gacacctctgtgaccggaccccctccggaacccccggctactgctcttactcccagctgc
atcttccaggacgacctcggcccccctcagtataaaagcatcaatctggagagaggacct
gatggcctgggcttcagtatagtgggggggtacggtagcccccatggagacctgcccatc
tacgttaaaaccgtgtttggaaagggggcagcggcggaggacggccgactgaagcgaggg
gatcagataatggcggttaacgggcagactctggagggcgtcactcatgaagaagccgtg
ggcatcctgaagaggaccaaagggaccgtcacactcactgtcctctcataa
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