Notothenia coriiceps (black rockcod): 104963507
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Entry
104963507 CDS
T04920
Symbol
supt6h
Name
(RefSeq) transcription elongation factor SPT6
KO
K11292
transcription elongation factor SPT6
Organism
ncc
Notothenia coriiceps (black rockcod)
Brite
KEGG Orthology (KO) [BR:
ncc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ncc03021
]
104963507 (supt6h)
03036 Chromosome and associated proteins [BR:
ncc03036
]
104963507 (supt6h)
Transcription machinery [BR:
ncc03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
104963507 (supt6h)
Chromosome and associated proteins [BR:
ncc03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
104963507 (supt6h)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SH2_2
YqgF
HHH_7
S1
Spt6_S1
HHH_3
S1_RRP5
HHH_9
SH2
Tex_YqgF
zf-Sec23_Sec24
Motif
Other DBs
NCBI-GeneID:
104963507
NCBI-ProteinID:
XP_010790769
UniProt:
A0A6I9PII4
LinkDB
All DBs
Position
Unknown
AA seq
890 aa
AA seq
DB search
MDESQGKGIRVLGVAYAPSRDTPVFCALINGEGEVADFLRLPYFMKRRNAFREDEREKKA
HDIETLKKFLSGKKPHVVAVAGENRDAQMIMEDIKRAISELEQESSVPAVGVELVDNELA
TLYMNSKKSEVDFRDYPPLLRQAVSIARKIQDPLIEYAQVCSTDDDILCLKLHPLQEQVV
KEDLLCALYFEFINRVNEVGVDVNKCIAHPHTQSLVQFVCGLGPRKGSQLLKILKQNNTR
LENRTQLVTMSHMGPKVFINCAGFIKIDTASLGDSTDSYIEVLDGSRVHPETYEWARKMA
VDALEYDESAEDANPAGALEEILENPERLKDLDLDAFAEELERQGYGNKGITLYDIRAEL
SCRYKDLRVAYRVPNTEEVFNLLTKDTPETFYIGKLITSIVTGIAHRRPQGESYDQAIRN
DSTGLWQCPFCQQDNFPELSEVWNHFDSGSCPGQAIGVRSRLDNGVQGFIPTKFLSDKTV
KHPEERVKVGMTVHCRIMKIDIEKFSVDLTCRTSDLMDKANEWKLPKDSYYDFDKETEDQ
KQEEDLKKKQQRTPYIKRVIAHPNFHNISFNQAEKMMETLDQGDLIIRPSSKGENHLTVT
WKVADGIYQHVDVREEGKENAFSLGHTLWINSEEFEDLDEISARYIQPMASFARDLLGHK
YFQELGSKDKMEELLVKTKREKPTFIPYFLSVCKELPGKFILGYQPRGKPRVEYVTITPD
GFRYRSQVFPTVNGLFRWFKDHYQEPVPGVTPSNSSRTRTPASLNATPANINIADLTRAV
NSLPRNMTSQMFNAIAAVTGQNQNPNTTPAQWGSSQYGYGGSTGGGGGSSSAYHVSAAAH
IQLLWKQTSCFRDCIQAHTIIQSSSLVQSFINPRCLHDTKYGYIRTCCYG
NT seq
2673 nt
NT seq
+upstream
nt +downstream
nt
atggatgagagtcagggcaaaggcattcgggtgctgggagtagcatatgcgcccagcaga
gacacacccgtgttctgtgctctgatcaacggggaaggggaggtggccgacttcctgcgt
ctgccctacttcatgaagaggaggaacgcctttagggaggatgagagagagaagaaggcc
cacgacatcgaaaccctcaaaaagtttctatctgggaagaagcctcatgtcgtggctgtc
gctggggaaaacagagatgctcaaatgatcatggaggacatcaagagggccatcagcgag
ctggaacaagagtcctctgtccccgctgtgggagtggagctcgttgacaatgagttggcc
acgctgtacatgaacagcaagaagtctgaggttgactttagggattacccccccttgctg
cgacaggctgtgtcaatagccaggaagatccaggaccccctgatagagtacgctcaggtt
tgcagcactgatgatgatattctctgcctcaaactccacccgctgcaggaacaagtggtg
aaggaagatctgctctgtgctctttactttgaattcattaaccgtgtgaatgaggtcgga
gtggatgtgaacaagtgcatcgcccaccctcacacccagagcctggtgcagtttgtctgt
ggtctggggccgaggaagggctcccagctgctgaagattctgaagcagaacaacactcgt
ctggaaaaccgaacccagctggtcacgatgagtcacatgggacccaaggtgttcatcaac
tgtgctggtttcatcaagatcgacacggcgtcgctcggagacagtacggactcctacatc
gaggtcctggatgggtctcgtgttcaccctgagacgtacgagtgggctcgtaagatggcc
gtggacgctctcgagtacgatgaatcggcagaagatgccaacccagccggagctctggag
gagatcttggaaaacccagaacgtctgaaagatctggacctggacgccttcgccgaagag
cttgagagacagggttatggcaacaagggcattactctgtatgatatccgtgcagagctg
agctgcaggtacaaggatctgagagtcgcctacagggtccccaacaccgaggaggtcttc
aacctgctcaccaaggacaccccagagaccttttatattggtaagctgatcaccagtata
gtaactggtatcgctcaccggcggcctcagggagagagctacgaccaggccatcagaaac
gactccaccgggctgtggcagtgtcctttctgccagcaggacaacttccccgaactcagc
gaggtttggaatcactttgacagcggttcgtgtccaggtcaggccatcggggtgcggtcc
agattagataacggcgtccaggggttcattcccacaaagttcctcagtgacaaaacggtc
aaacaccccgaggagagggtcaaggtgggtatgacggttcactgccgcatcatgaaaatc
gacattgagaaattcagcgtggacctcacatgccgcacctccgatctgatggacaaggcc
aatgagtggaagcttcccaaggacagctactatgactttgacaaagagactgaagaccaa
aagcaggaagaggacctcaaaaagaaacagcagcgaacaccatatataaagcgtgtgatc
gcccatcccaacttccacaatatcagtttcaaccaggcggagaaaatgatggagaccctg
gaccaaggagacctgatcatcagacccagcagcaagggagagaaccacctcacggttacc
tggaaggtggctgatggcatctaccagcatgtggatgtgagggaagaaggcaaagagaac
gcattcagcttaggacacactctctggatcaactctgaggagtttgaagatctggatgaa
atcagtgctcggtacattcaaccaatggcgtcatttgcccgagatctcctggggcataag
tactttcaggaattggggagcaaggataaaatggaggagttgttggtcaagacgaagagg
gagaagcctacttttattccatactttctatcggtatgtaaagagctcccggggaaattc
atcctgggctaccagcctcgaggaaaaccaagggttgagtatgtgaccatcaccccggat
ggcttccggtaccgctcacaggttttccccacagtgaacgggttattccgctggtttaag
gaccattaccaagagcctgtgccaggcgtcactcccagcaacagcagcagaacaaggact
cctgcgtccctgaacgccaccccagcaaatatcaacatcgcagacttgacgcgagctgtc
aactccctcccacgcaacatgacctctcagatgttcaatgccatcgccgcggttacaggc
cagaaccagaaccccaacaccacccccgctcagtggggctccagccagtacggatacggt
ggcagcacagggggaggaggggggagctcctctgcgtaccatgtgagtgcagctgctcat
attcaactactgtggaagcagacaagctgtttcagggattgtattcaggctcacacgata
atacaaagttcttctcttgttcaatcctttataaaccctaggtgcctacatgatacaaaa
tatggatacataaggacttgctgttatggttaa
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