Notothenia coriiceps (black rockcod): 104963629
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Entry
104963629 CDS
T04920
Name
(RefSeq) parapinopsin-like
KO
K04251
long/medium wavelength-sensitive opsin
Organism
ncc
Notothenia coriiceps (black rockcod)
Brite
KEGG Orthology (KO) [BR:
ncc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
ncc04030
]
104963629
G protein-coupled receptors [BR:
ncc04030
]
Rhodopsin family
Vision
Opsin
104963629
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
7tm_1
7TM_GPCR_Srv
7TM_GPCR_Srsx
TAS2R
Motif
Other DBs
NCBI-GeneID:
104963629
NCBI-ProteinID:
XP_010790542
UniProt:
A0A6I9PQT0
LinkDB
All DBs
Position
Unknown
AA seq
348 aa
AA seq
DB search
MVHLSLHDGNSSSSHSSVNEELLSRTGYTILAVIMGVFSVCGIFLNVLVIVVTVRHRQLR
QPLSYALVNLAICDLGCAVFGGLPNTVTSAMGYFSLGRAGCVLEGFAVSIFGISSLCTIA
IISVERYIVVCYPQGAILFQTRHAVSGVVLSWLWSFFWNTPPLFGWGSFELEGIKTSCAP
NWYSRDIGNMSYIILYFMLCFAVPFTVIVVSYSKLLWTLRQVTKLQTCEAGSTNRVEMQV
ARMIVVMVLAFLVTWLPYAGMALAVIIDSSLYINPIIATIPVYLAKSSTVYNPMIYIFMN
RQFRGYAVPTILCGRNPWAIESQVTEDETTVSALNKLPRVSPKQSLNE
NT seq
1047 nt
NT seq
+upstream
nt +downstream
nt
atggtgcacctttccttacatgatggaaactcctcatcctctcacagttcagtcaacgag
gagctcctgtctcggactggctacacaatactggccgttatcatgggtgtgttttccgtg
tgtgggatcttcctcaacgtcctggtgattgtggtgactgtgagacacagacagctgagg
cagccactcagctacgccttagtaaatctggccatatgtgacctgggctgtgctgtattt
ggaggtctgcccaacacagtaaccagtgccatgggatacttcagcctgggacgcgcaggc
tgtgttttagagggctttgctgtctccatttttggtatatcaagtctttgtaccatcgcg
ataatctctgtagaacgctacatagtggtgtgctatccccagggggctatcctgttccag
acaagacatgctgtttccggagtggtgctgtcctggctgtggtcgtttttttggaacact
ccacctctgtttggttggggtagttttgagctggagggcatcaaaacctcctgtgcgcct
aactggtacagccgggacatcgggaacatgtcctacatcattttatactttatgctgtgc
tttgctgtgcccttcacggtaatcgtagtatcttactcaaaacttttatggaccctccgg
caggtgaccaagctgcagacatgcgaggctggcagcacaaatcgtgtggagatgcaggtg
gcacgtatgatagtggtgatggtgttggccttcctagtgacctggctgccatatgctggc
atggccctcgctgtcatcattgactccagtttatatattaaccccatcatcgctaccata
ccagtgtacttggctaagagcagcactgtctacaaccctatgatatacattttcatgaac
agacagtttcggggatacgctgttcccactatcctgtgtggaaggaacccgtgggcaatc
gaatcacaagttactgaggatgagaccacagtttctgctctcaacaagctcccaagagtc
tcacccaaacaatctttgaatgaataa
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