Notothenia coriiceps (black rockcod): 104963652
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Entry
104963652 CDS
T04920
Name
(RefSeq) protocadherin-1-like
KO
K16498
protocadherin delta 1
Organism
ncc
Notothenia coriiceps (black rockcod)
Pathway
ncc03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
ncc00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
104963652
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ncc01009
]
104963652
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ncc04515
]
104963652
Protein phosphatases and associated proteins [BR:
ncc01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
104963652
Cell adhesion molecules [BR:
ncc04515
]
Cadherins
Protocadherins
104963652
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Protocadherin
Cadherin_2
Cadherin_CELSR2_9th
RET_CLD1
PDGLE
VWA_3_C
Syndecan
Motif
Other DBs
NCBI-GeneID:
104963652
NCBI-ProteinID:
XP_010790567
UniProt:
A0A6I9PQV9
LinkDB
All DBs
Position
Unknown
AA seq
1190 aa
AA seq
DB search
MEPNVRQVLFWVLVLHCGSAQGSILYRVQEEQPPNTLIGSLAADQGLPDSGHLYKLEVGA
PYLRVDGKTGDIFTTEIPIDRETLRDCRTLVKGKPCYLEFEVSVTDLIQNQSPRLIEGRI
EVQDINDNTPQFPSSVLTISVPENTIMGALFSIPLATDRDSDRNGVADYALTAGPDAATL
FGLQVADDRGGKLPQLIVLGNLDRELKDSYDLTIKAMDGGNPQRYSSALLRVVVTDANDN
SPKFERSTYEAEVSENSPPGHSVLQVKANDSDMGSNGEIEYTLHQAVDPVSTLLRIDRST
GIIYVKGSLDREEISSLSFYVVARDKGPQPKSSKTFVTIEVADQNDNAPVVEIRGIGLVT
HSEGVANISEDMPVGTAVALVQVSDKDEGENAMVTCVVAGDVPFQLRPASDSSIDSKRKY
FLQTTTPLDYERIRDYRVEIVAVDSGNPALSSQNSLKVQVTDVNDNSPIFSPTLFEVDFA
EENQPGEKVLDVIASDADSGTNAELLYSIVADSSIKGLFEIDPNTGTVRARSPLDREHKE
RYEFRVTAADKGSPVHKGSATVVINVLDRNDNDPKFMLSGYSFSVLENMPPLSPVGMVTV
LDVDKGENALIELSVEPDGGKFVVQNGTGTILSSISFDREKESSYTFRLKAVDGGEPPRS
SYVAVTINVLDENDNNPVVTKPSNSSFRRLSPLASPDSHVEIVEAEDLDSGPNAELMFSI
SGGNPYQLFRISPSSGEITLAKEMTRKHGGLHRLVVRVSDRGKPARHATALVHIYVNDTI
SNVSLVEALVGHSLYTPLERDIAGDPDYGFAAQRSNILFGSLAGVAGVVMLILVVVFIRH
RIQRETKSGYQAGKKETKDLYAPKQAPKNAKGKRGRKGKPQKSPKPLGEDEEVSLQKSLK
FNLDGVNDSPRIHLPLTYSPGSPDIGRHYRSNSPLPSIQLQAQSPSASQKHQAVQDLPAA
NTFVGTGGDDNSTGSDQYSDYSYKTSQMKYSNKQHTHRRVTFSTTNPVQDLQDASQHSYY
DSGLEESETPSSKSSSGPRIGPLTLPEDHYERTTPDGSIGETEHPENDIRSLPDVAMTGN
CTNECSELGHSDACWMPGHPSPVRKARNPPKLSTFVPYQERGSLGRLANGSARLGGEEPR
SRLPPSRSAYSNSGNDASQDCPLEEMPLSVASEFPPTPPSAHTPKREIYL
NT seq
3573 nt
NT seq
+upstream
nt +downstream
nt
atggaaccaaatgtacgacaagtgctgttctgggtcctggtgctgcactgtggttctgct
cagggcagcatcctgtacagggtccaggaggagcagccccccaacactctgattggtagc
ctggcagcagaccagggcctaccagactcaggccatctctacaagctggaggtcggggca
ccctacctacgtgttgatgggaagacgggggacattttcaccaccgagatacccatagac
agagagaccctgagggactgtcgaaccctggttaagggtaagccttgctaccttgaattt
gaagtatcagtgacggacctgatacaaaaccagagcccacgactgattgaaggacgcatt
gaggtacaggacataaatgacaacactccacaatttccctcttctgtcctcaccatctca
gtccctgaaaacacaatcatgggggcgctattctccatacctctggctactgacagggac
tcagacaggaatggggtggcggattatgctctgactgcagggccagatgcagcaacccta
tttggcttacaggtggctgacgacaggggagggaagctcccgcagcttattgtcctgggc
aacctagatcgcgagttaaaggattcctatgacctcaccatcaaggcaatggatggagga
aatccacagcgctacagcagtgctctgctgagagtggtagtcactgatgccaacgacaac
tctcccaagtttgaaaggtccacgtatgaggcggaagtgtccgaaaacagtccaccgggg
cactctgtgttgcaggtcaaagcaaatgactctgacatgggctctaatggagaaattgag
tatacccttcaccaagcagtagacccagtgtcgacactcttacgaattgaccgctccacc
ggcattatctacgttaaaggatcccttgacagggaagaaatcagcagcttgtctttctat
gtggtggcgagggataagggtccacaacctaaaagctcaaagacatttgttacaattgag
gtggctgaccaaaatgacaacgccccagttgtggagattcgtggaattggtcttgtgaca
cacagcgaaggagtggccaacatttcagaggacatgccagttggaaccgctgttgcttta
gtgcaagtgtctgacaaggatgagggagaaaacgctatggtcacttgtgtagtcgcagga
gatgtgccgttccagcttcgccctgccagcgactcatccattgacagtaagaggaagtat
ttcctacagacaaccactcccctcgactacgagaggattagggattaccgagtcgagatt
gtcgctgttgattctggaaatccggccctctccagccaaaattctctgaaggtgcaggtg
actgatgtgaacgacaactctcccatattctccccaacattgtttgaggtagattttgcc
gaagaaaaccaaccaggggagaaggttttggatgttatagcttcagatgctgacagtggc
actaacgctgaactcctttatagtattgtggcagactcatccatcaaaggtctgtttgag
attgatccaaatacgggcacagtaagagcccgaagcccccttgatcgtgagcataaagaa
cgctacgagttccgggtcacggcagcagataaaggctcacctgttcataaagggtcagca
actgttgtaataaacgtccttgaccgcaacgacaatgaccccaagttcatgctgagtggc
tacagcttttcagttttggagaacatgcctcctctcagtccagttggcatggtgacagtc
ctggatgtggacaaaggggagaacgccctaattgaactgtctgtagagcctgatggagga
aagtttgtcgttcaaaatggaacaggcaccattctttcaagcatctcgtttgatagggag
aaagaaagcagctatactttccgtcttaaagcagtggatggaggagagccccctcggtct
tcatatgtggccgtcacgatcaatgtactggatgaaaatgacaacaaccctgtggttacc
aaaccctccaattcctccttcaggcgtttgtcacctctagcttccccagatagccacgtt
gagatagtggaagccgaagacctggatagtgggcccaatgccgagctgatgttcagtatt
tctggcggaaacccttaccagttattccgcatttcaccgtccagtggggagatcactcta
gcaaaagagatgacccgaaaacatggcggcctacatcggctagtagtgcgagtgagtgac
agggggaagcctgcacgtcatgccactgccctggtccacatttatgtcaatgacaccatc
tcaaatgtcagcttagtggaggctctagtaggacacagtctttacactccactggaaagg
gacattgctggtgatcctgactatggtttcgctgcacagcgtagtaacattttgtttgga
agccttgccggagtggcaggtgttgtcatgttgatccttgtggtggtatttatccgacac
cggatccagagagaaactaagagtgggtatcaggctggcaagaaggaaacaaaagactta
tatgcgcccaaacaagcaccaaaaaatgcgaaaggcaaacgaggaaggaaaggaaagccc
caaaagtccccaaaaccactcggggaagatgaagaagtcagccttcaaaagagtctcaag
ttcaacctcgatggagtgaatgatagccccaggatacacctgcccttaacatattctcca
ggaagccctgatataggcaggcactaccgctccaactcccccttaccctccatccagctg
caggcccaatccccttcggcctcacagaagcaccaggctgtccaggaccttcctgccgcc
aacacctttgtagggaccggaggagacgacaactctaccggctcagaccagtactcagac
tacagctacaagaccagccagatgaagtacagcaacaaacagcatacccatcgacgagtg
accttctccaccaccaaccccgtgcaggacctgcaggacgcctctcagcacagctactat
gacagcggcttggaggaatcggagactcccagcagcaagtcgtcgtctggtccccgcatc
ggacccctgaccctgcccgaggatcactatgagagaaccactccagatggcagcatcgga
gagaccgagcaccctgaaaacgatatccgctcgctccctgatgtggcgatgaccggaaac
tgtacaaacgagtgcagcgagctgggccactcagacgcctgctggatgcctgggcatccc
tcccctgttcgcaaggccaggaaccccccgaaactctccaccttcgtgccttaccaggag
agggggagcctgggacgcctagccaacgggagcgcaaggctggggggggaggagccccgg
tcgcgcctcccgccctcccgcagtgcctactccaacagcggtaacgatgccagtcaggac
tgccccttagaggagatgcccctgagcgtggcctctgagttcccgcccacccccccctcg
gcccacactccaaaaagggaaatttacctgtga
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integrated database retrieval system
