Notothenia coriiceps (black rockcod): 104963675
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Entry
104963675 CDS
T04920
Name
(RefSeq) histone-binding protein RBBP4 isoform X1
KO
K10752
histone-binding protein RBBP4
Organism
ncc
Notothenia coriiceps (black rockcod)
Pathway
ncc03082
ATP-dependent chromatin remodeling
ncc03083
Polycomb repressive complex
ncc04218
Cellular senescence
Brite
KEGG Orthology (KO) [BR:
ncc00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
104963675
03083 Polycomb repressive complex
104963675
09140 Cellular Processes
09143 Cell growth and death
04218 Cellular senescence
104963675
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ncc03036
]
104963675
Chromosome and associated proteins [BR:
ncc03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
104963675
Histone modification proteins
HAT complexes
HATB complex
104963675
HDAC complexes
Sin3A-HDAC complex
104963675
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
104963675
PRC2.2
104963675
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
104963675
Heterochromatin formation proteins
Other heterochromatin formation proteins
104963675
Chromatin remodeling factors
NuRD complex
104963675
NuRF complex
104963675
NuRF complex (fruit fly)
104963675
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
CAF1C_H4-bd
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_CAF1B_HIR1
Beta-prop_RIG_2nd
Beta-prop_EIPR1
Beta-prop_TEP1_2nd
WD40_WDHD1_1st
WDR55
Beta-prop_EML_2
Beta-prop_WDR75_1st
Beta-prop_EML
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
WD_LRWD1
WD40_RFWD3
Beta-prop_DCAF12
ANAPC4_WD40
Beta-prop_WDR19_1st
WD40_MABP1-WDR62_1st
Beta-prop_RIG_1st
eIF2A
MIOS_WD40
Beta-prop_SPT8
Beta-prop_SCAP
Beta-prop_IFT122_1st
Beta-prop_HPS5
Beta-prop_DCAF4
Motif
Other DBs
NCBI-GeneID:
104963675
NCBI-ProteinID:
XP_010790592
UniProt:
A0A6I9PQY3
LinkDB
All DBs
Position
Unknown
AA seq
456 aa
AA seq
DB search
MADKEDIAFAGAFDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTR
PEGKDYSVHRLVLGTHTSDEQNHLVIASVQLPNDDAQFDASHYDSEKGEFGGFGSVSGKI
EIEIKINHEGEVNRARYMPQNPCIIATKTPTSDVLVFDYTKHPSKPDPSGECTPDLRLRG
HQKEGYGLSWNPNLSGCLLSASDDHTICLWDISTVPKEGKVVDAKTIFTGHTAVVEDVSW
HLLHESLFGSVADDMKLMIWDTRSNNTSKPSHAVDAHTAEVNCLSFNPYSEFILASGSAD
KTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQS
PEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMAENIYDDEDPE
VHSLHTSSFHLLCASIFRCWVHMHFSQNPFSWELCF
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
atggctgataaagaggatattgcatttgcaggtgcatttgatgatgccgtggaggagagg
gtgatcaatgaggagtacaagatatggaagaagaacacgcctttcctctacgacctggtc
atgacacacgccctggagtggcccagcctcaccgcccagtggctgcctgatgtcaccagg
ccagaggggaaagactacagcgtacacaggctggttttgggaacacacacgtctgatgag
cagaatcaccttgtcattgctagtgttcagcttcctaatgatgacgcgcagtttgatgcc
tcacactatgacagcgagaaaggagagtttggaggttttggatctgtcagtgggaagata
gagattgagatcaagataaaccatgagggggaggtgaacagagcccgctacatgcctcag
aacccttgcatcatcgccactaagacccccaccagcgacgtgctggtctttgactataca
aagcacccctctaaacctgacccttctggagagtgcaccccagatctgcggttgcgaggc
caccagaaggagggctatggtctctcctggaacccaaaccttagcggctgcctcctcagt
gcctctgatgatcatacaatctgcctttgggacatcagcacagtgcccaaagagggaaag
gtagtggatgccaagaccatcttcacaggccacacggccgtggtggaggatgtttcctgg
cacctgctgcacgagtctctctttggatctgtggccgatgacatgaaactcatgatctgg
gacacacggtccaacaacacctccaagcccagccatgcagtagatgcccacactgctgag
gtcaactgcttatccttcaacccgtacagcgagttcatcctggcctctggctctgcagat
aagaccgtggcgctgtgggacctgaggaacttgaagctgaagctgcactcgtttgagtct
cacaaggacgagatcttccaggttcagtggtctcctcataacgaaaccatcctggcctcc
agcggcaccgacaggaggctcaatgtgtgggacctcagtaagatcggagaggagcagtca
ccagaggacgctgaggacggcccccctgaactgctgttcatccacggcggacacacggcg
aagatctcagacttctcttggaaccccaacgagccgtgggtcatctgctctgtatcagag
gacaacatcatgcaagtctggcaaatggctgaaaatatctacgacgatgaggacccagaa
gtccattctctccacacctcttcatttcacctgctttgtgcatctattttccggtgctgg
gtgcatatgcatttttctcaaaatcctttttcttgggagctgtgtttttga
DBGET
integrated database retrieval system
