Notothenia coriiceps (black rockcod): 104963858
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Entry
104963858 CDS
T04920
Symbol
gen1
Name
(RefSeq) flap endonuclease GEN homolog 1
KO
K15338
holliday junction resolvase GEN1/YEN1 [EC:3.1.-.-]
Organism
ncc
Notothenia coriiceps (black rockcod)
Brite
KEGG Orthology (KO) [BR:
ncc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ncc03400
]
104963858 (gen1)
DNA repair and recombination proteins [BR:
ncc03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
104963858 (gen1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
XPG_I
Chromo_2
XPG_N
Ada3
SPMIP11
Motif
Other DBs
NCBI-GeneID:
104963858
NCBI-ProteinID:
XP_010790819
UniProt:
A0A6I9PIM7
LinkDB
All DBs
Position
Unknown
AA seq
921 aa
AA seq
DB search
MGVHELWSIVEPVRESVPLYSLSGKTLAVDLSLWVCEAQHVQAMMGRVTKPHLRNLFFRV
SSLTLMGVKLVFVMEGEAPKIKAETMSKRTEQRFGGLKKASAPKTTSNTSRGRFNAVLRE
CAAMLDYLGVPWVTAAGEAEAMCAYLDSEGLVDGCITNDGDAFLYGARTVYRNFNLNSKD
PQVDCYKTSRVHTDLNISRENLVGLAVFLGCDYIPKGIPGVGREQSLKLIQMLKGQTILQ
RFTQWKEDNAGVSEGVLKKVPHCHLCRHPGSAKAHERKGCVLCDSKHFCQPQDFDYQCPC
DWHRFEETRQAVSLEANIRKKTLASQLFPFTEIIKEFLISKDKPVSQFKRRQPNLMLIQK
FAYDKMEWPKHYTSEKALVLMTYSELMNRKYGREMSSQIKPLRILKPRVRNAVACFEIIW
RTPEHYVFPEDRPAEDQHEVRTVEEESLFRVAFPEVVESYLRDKALAEENKTKKKKTKSK
KEKPSDVSDGISDLLAQMTIQTSSNTEPQKLPASNPDDLEVVVLDTPVKHIQRQKSKEEH
SRLGHCPKTPLSHAGSEAAASPSVSDAIDALHLSDIDWEALSFTSSPTPQSTINHTTEPK
LGETTESDVIDEKIELKISNDVVRADSRSEVCFTECPLRDRLLMKNTVRAMDLKEKHSDE
ISKQLNYELASLKKMSSHNSHSKQNAQIPDKGSSGIALLGKESAVNKKEPLTEQKQSATN
KAETHSSKPRLTPIVQSKTKDNGPQKPPQKYKFVRKAISSSTLAPQRCNSDPVQSDRNAL
HSTKKSVCMSVCSSSEESDAENKQTGPQRKAYSKHTNKMKGNFLSAIPLKPKTTKPTAKA
APTIVQSLQPKAQSCNADIDFKSRPVATQSKSQDVPPAHVDGGVFPQTPGSPAVVLDSDD
SIICVESPLPLAERLRLKFMK
NT seq
2766 nt
NT seq
+upstream
nt +downstream
nt
atgggtgttcacgaattatggtccatcgtcgagccggtccgtgagtctgtgcctctgtac
agcttgagcggaaaaacgctggctgttgacctgagtttatgggtgtgcgaggcccagcat
gtccaagcgatgatggggagagttaccaaaccccacctgaggaatttatttttcagggtg
tcatctctcacgcttatgggggtaaagcttgtctttgtgatggaaggagaagcccctaaa
atcaaagcagaaacgatgagcaagaggacagaacagagatttggaggattgaaaaaggct
tctgcccctaagactacatctaacaccagcagagggcgctttaatgctgtactcagagag
tgtgcagccatgttggactatttgggtgtgccctgggtgacggctgcaggcgaggctgag
gccatgtgtgcctacctggactcagagggcctggtggacggctgcatcactaatgatgga
gacgccttcttgtatggagcccggactgtctacaggaactttaatttgaacagtaaagac
cctcaggtggactgttacaagacctccagagtacacacagacttaaatatctccagagag
aatctagttggtctggccgtctttcttggatgtgattatattcctaagggcataccaggt
gttggaagagagcaatcactgaagcttatccagatgctgaaaggacaaactattctgcag
aggttcacccagtggaaggaggacaatgcgggtgtgtctgagggagttttaaagaaggtt
ccccactgccacctctgtcgacatcctggctcagcgaaggcacatgaacgtaaaggctgt
gtgctctgtgatagtaaacatttctgtcagcctcaggactttgactaccagtgtccctgt
gactggcaccgcttcgaagagacccggcaggccgtgtctcttgaggcaaacatcaggaag
aaaacactggcaagccaactgttcccttttacagagatcattaaagagttcctgatttcc
aaggacaagcctgtgtcccagttcaagaggagacagccaaacctgatgctgatacagaaa
tttgcctatgacaagatggagtggccaaagcactacaccagtgaaaaggcgttagtcttg
atgacctactcagagttgatgaacagaaagtatggaagagaaatgtcttcccaaatcaag
cccctaagaattttgaaaccaagggtgaggaatgccgtcgcttgctttgagatcatctgg
agaacaccagaacattacgtgtttcctgaggatcgtcctgcggaggatcagcacgaggtg
aggacggtggaggaagagtctctcttccgtgtggccttcccagaggtggtggagagctac
ctacgagacaaagctctggctgaagaaaacaagaccaagaagaaaaaaacaaagagtaaa
aaggagaagccatctgatgtttctgatggtatttctgacctcttggctcagatgaccatc
cagacttcctccaacaccgaaccacaaaagctgcccgcttcaaacccagatgacctagaa
gtggtggttttggacactccagtgaagcatatacagcgtcagaagtcaaaagaggagcac
agcaggttgggccattgccccaaaactcctctgtctcatgcaggaagtgaagctgctgct
tctccatccgtctctgatgctatcgacgcgctgcacctgagtgatatagactgggaggct
ttgtctttcacgtcttctccaactccacaatctactattaaccacaccactgagcccaaa
ctgggggaaaccacagagagtgatgttattgatgaaaaaattgagctgaaaatctcaaat
gacgtcgtaagagcagactccagatctgaggtgtgcttcacagagtgtcctttgagggac
aggctgctcatgaagaacacagtaagagctatggacctgaaggagaaacacagtgatgag
atctcaaaacagcttaactatgagttggcctctctcaaaaaaatgtcttctcataactca
cactcaaaacaaaatgcacagatccccgataaaggtagcagtggcattgcattgttaggg
aaagaatctgctgtaaacaaaaaggaaccactcactgaacaaaagcagagtgcaacaaat
aaggcagaaactcacagttcaaaaccgcggttgacgcctatagtacaaagtaagacaaag
gacaacggcccccaaaagcctcctcagaaatataaatttgtccggaaagccatttcatca
tccacactcgccccacagaggtgcaactctgaccccgttcagagtgacaggaacgcattg
cacagcactaagaagagtgtgtgcatgagtgtgtgttcatccagcgaggaaagtgatgca
gagaacaagcagacaggaccacaaagaaaagcttacagcaagcacacgaacaagatgaag
ggcaacttcctgtctgccatcccactgaaacctaaaacaaccaaaccgacagctaaagca
gctcctaccattgttcagtctttacagccaaaagctcagagctgcaatgcagacattgat
ttcaaaagcagacctgtagctactcaaagcaaatctcaagatgtcccaccagctcacgtt
gatggtggtgtgtttcctcagaccccgggatcaccggccgtcgtgttggacagtgatgac
tccattatttgtgttgagagtccactgccactggcagagagactgagactgaaattcatg
aagtga
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