Notothenia coriiceps (black rockcod): 104963922
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Entry
104963922 CDS
T04920
Name
(RefSeq) sodium- and chloride-dependent GABA transporter ine-like
KO
K05039
solute carrier family 6 (neurotransmitter transporter, taurine) member 6
Organism
ncc
Notothenia coriiceps (black rockcod)
Brite
KEGG Orthology (KO) [BR:
ncc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ncc02000
]
104963922
Transporters [BR:
ncc02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
104963922
SSDB
Ortholog
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GFIT
Motif
Pfam:
SNF
Motif
Other DBs
NCBI-GeneID:
104963922
NCBI-ProteinID:
XP_010790910
UniProt:
A0A6I9PT48
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Position
Unknown
AA seq
579 aa
AA seq
DB search
MEQQPIRPTWSRQIEFTLAGIGCAVGLGNVWRFPYLCYRSGGGAFLVPYLLMLVVLGVPL
LYMELIVGQYTRRGPVHALANVCPLLKGVGIASVAISFIMCTYYNLVITWALYYLFSSFQ
SPLPWQNCNNTWNTQNCTSHFTNSSYSSTASQEFFKYKMLQQTGGVDEAGLIRWELFLIL
LLAWIIIYFCIFKGVKSTGKVVYFTALFPYIILIALLINNVQLPGALDGITFFIVPDWNM
LLSVEVWVNAAAQIFNSIGIGFGSLLAMSSYNSFNNNVLKDTLTIAIINSLTSLLAGFVI
FSAFGYMSHLQGIPISDLAVDGPGLVFVVYPQAFSNMPVSQLWAVMFFFMLLCLGLDSEF
AMVEVMVTSLMDEFYHKLIRFFKRKELFVLAVCGAAAILGIPCVMQVGIYVFQLMDHYTA
IVSIMFLAFFEVIAICWCYGVTRLSDNLEEMTGKRANLFFRVCWLIVAPVLVGVILVFSI
IQFKPARYEDYVFPPWAQGVGWLIAMGSIIWIPLGAVHTLWVLPGSFIQKLKLSITPGTL
DGKSKMAYYERGGRDANTGLAVISSDIHLTEKPPLQTHL
NT seq
1740 nt
NT seq
+upstream
nt +downstream
nt
atggagcagcagcccatcagaccgacatggagcaggcagatagagttcaccctggccggc
atcggctgtgctgtgggtctgggcaacgtgtggaggttcccatatctctgctacaggagt
ggaggaggtgcctttctggtgccatacctgctcatgctggtggtgttgggggtccctctg
ctctacatggagctgattgtgggtcagtacacgaggagagggcctgtccatgctctggct
aatgtctgcccactgttaaaaggagtgggcatagcatcagtggccatctccttcatcatg
tgtacctactacaacctggtcatcacctgggccctgtattatctcttcagctccttccag
tcaccactgccctggcagaactgcaacaacacctggaacacacagaactgcaccagtcat
ttcaccaacagcagctactcctccacagccagccaggagttcttcaaatacaagatgctg
cagcagactggtggagtagatgaagcaggactgattcggtgggagcttttcctcattctc
cttctggcttggatcatcatatacttctgcatctttaagggggtcaaatcaacaggcaaa
gtggtgtactttacggctctgttcccgtatattatcctgattgcactgctgataaataat
gtgcagcttcctggagcattggatggaataaccttcttcattgtgccggactggaacatg
ctcctgtcagtagaagtgtgggtgaacgcagcagcacagatctttaactccatcgggatt
ggtttcggctccctcttggccatgtccagctacaactccttcaacaacaatgttctaaag
gacaccctgactatagccatcatcaactccctcaccagcctcctggcaggttttgtcatt
ttctctgcttttggatacatgtctcatcttcagggcatccctatcagcgatctggctgtg
gatggtccaggactggtttttgttgtttacccacaagccttttccaacatgccagtatct
cagctctgggctgtgatgttcttcttcatgctgctctgccttggactggacagtgagttt
gcgatggttgaagtgatggtgaccagcctcatggatgaattttatcacaaactgataagg
tttttcaagaggaaggagttgtttgttcttgctgtctgtggcgcagcagctattctgggg
attccttgtgtcatgcaggtgggcatctatgtgttccagctcatggatcattacactgcc
attgtgtccatcatgtttcttgcattctttgaggtcatagccatctgttggtgttatggg
gtgactcgactttcagacaacctggaggagatgactggaaaaagagcaaacctgttcttc
agagtgtgttggctgatagttgctcccgtgctagttggtgtgatcctggttttctccatc
atccagttcaaaccagcacgctatgaggactacgtgttccccccctgggctcagggggtc
ggctggctcatcgccatgggctccatcatctggattcctctgggtgctgtgcacacactg
tgggtgctgcctggctccttcatccagaaactgaagctgtccatcacaccaggcacgctg
gatggaaagtcaaaaatggcttactacgagaggggaggaagagatgcaaatacaggctta
gctgtcatcagctccgacatccatctaactgaaaaacctccactgcagacacacctgtga
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