Notothenia coriiceps (black rockcod): 104963931
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Entry
104963931 CDS
T04920
Name
(RefSeq) transient receptor potential cation channel subfamily V member 1-like
KO
K05222
transient receptor potential cation channel subfamily V member 1
Organism
ncc
Notothenia coriiceps (black rockcod)
Pathway
ncc04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
ncc00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
104963931
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ncc04040
]
104963931
Ion channels [BR:
ncc04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
104963931
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ank_2
Ank
Ank_5
Ank_3
Ion_trans
Ank_4
Motif
Other DBs
NCBI-GeneID:
104963931
NCBI-ProteinID:
XP_010790922
UniProt:
A0A6I9PIW3
LinkDB
All DBs
Position
Unknown
AA seq
774 aa
AA seq
DB search
MEKSEMFGISLETDNRTMEEKARHRAAHKGGSGNEPPKAPMDTDYQEEMEIPKPKIRMNA
NFDKEIQGLDPSGSTDNRFGIDRLFEAVASRDVQKLDGLHQYLHRNRMKLSNSLYQSYGK
TALMKALLHLMDGKNETVELLIDISEKMKDINEFVNAAYTNVYYKGQTALHIAIERRSLS
YVELLLSKGADVHAKACGTFFQPHDGPNFYFGELPLSLAACTNQPDVVDFLMKSEYQRAS
AELTDSHGNTVLHALVVVADNSADNTEFVTKMYDRILKTNAELHPKSKLEDIENNNGLTP
LKMAAKTGKIGIFSHILKREFQENKAKHLSRKFTEWVYGPVQSSLYDLASVDSYQENSVL
DILVYGSDIPNRHEMLQMEPLSHLLDEKWKKFAGRMFFLNLLVYILYLINFTLVAYNKKF
GLPPFTLEHTTLGYLYVSGQLVTALANCYFFVIGVMDMYRKRPKLQTLLIDGYYEILFFF
QGFLFLFTAGLYWSGMEQYLSVMVVCLALSWVNILYFSRGDRHMGIYSIMIQKMILCDIM
RFLLVYIVFLFGFSAAVVSLLIEPAGNTTVVETPGKGRLYITVAPEDCVKPSYRSITFTI
LQLFKFTIGMGDMEFIQDHKSSEVFYVLLIGYIILTYILLLNMLIALMNCTVEKTTKEST
SIWKLQRAITILDMEKRLSSCLRKRFRCGVEKNLRTTLGDDRRRCFRVEEVNWNKWNSNL
GKINEDPGCWDRAQQPAAHTPPNRGRSWRGFFTEGSRQQAYQSSEMNLLNPPSV
NT seq
2325 nt
NT seq
+upstream
nt +downstream
nt
atggagaagtcagagatgtttggcatctctttggagacagacaacaggacgatggaggag
aaagcgcggcacagagctgcgcataagggcggttcaggcaatgagccgcccaaggctcca
atggacactgattaccaggaagagatggagatccccaagcctaaaatcagaatgaatgcc
aactttgacaaagagattcaaggattggatcccagtggaagcacagacaacaggtttggt
atcgacaggctgtttgaagcggttgccagcagggacgtccaaaagctggacggcctgcat
cagtacctgcatcggaacaggatgaaactgtccaactctctgtatcagtcttacggtaaa
acggccctcatgaaggctctgctgcacctcatggatggcaaaaacgagacggtggagctt
ttgatcgacatttcagagaagatgaaagacattaatgagtttgtaaatgcggcctacact
aacgtctactacaaaggtcagacagctcttcatatagccattgagaggaggagtctctcc
tatgtggagctgctgctcagtaaaggagcagacgtccacgccaaagcctgcggaactttc
ttccagccacacgatggccccaacttctactttggtgagctgcctctgtctctggcagcc
tgcaccaaccagcccgacgtagtggacttcctcatgaagagcgagtaccaacgcgcaagt
gctgagctaactgactctcatggaaacactgtgctgcacgccctggtggtggtggctgat
aactctgccgataacacagagtttgttaccaaaatgtatgaccgcatcctcaagaccaat
gccgaacttcaccccaagtcgaagctggaggacatcgagaacaacaatgggctgacgcct
ctcaaaatggctgccaagactggcaagattgggattttttcacacatcctaaaacgtgaa
ttccaagagaacaaagccaaacatctgtcccgtaagttcacagagtgggtttacgggccc
gtccagagctccttgtacgacctggcctcggtggactcgtaccaggagaactcagtcttg
gatattcttgtgtacggcagtgacattcctaaccgccacgagatgctccagatggagcct
ctgagccatctgctggacgagaagtggaagaagtttgctggtcgaatgtttttcctcaac
ctcctggtctacatcctgtacctgatcaatttcacccttgtggcctacaacaagaaattt
gggctgccgccgtttaccctcgaacacaccactctgggttacctgtacgtttcaggccag
ctagtgacagcgctggcaaactgctatttctttgtcataggggtcatggacatgtatagg
aaacggccgaagctgcagacgttgctgattgacggatattatgagattcttttttttttt
cagggcttcctgttcctgttcacagccgggctgtattggtcggggatggagcagtacctc
agcgtaatggtggtgtgtctcgctctcagctgggtcaacatcctctatttctccaggggc
gacagacacatgggcatctacagcatcatgatacagaagatgatcctctgtgatatcatg
cgcttcctccttgtctacattgtcttcctctttggattttcagcagcggtggtcagtctg
ctcatagagcctgcgggaaacaccactgtggttgagacgccgggaaaggggcgtttgtat
attacagttgctcctgaggattgtgtaaagccctcctacaggagcatcaccttcaccatc
ctgcagctcttcaagttcacaatcggcatgggggacatggaattcatccaggaccacaag
agcagtgaggtcttctatgtgctccttatcgggtacatcatactcacctacatcctgttg
ctcaacatgctcatcgccctcatgaactgcaccgtggagaagaccaccaaggagagcacc
agcatctggaagctacagagggccatcaccatcctggacatggagaaaaggctgtctagc
tgtctgaggaagaggtttcgctgtggggtggagaagaacctcaggactactcttggagac
gaccgtcgccggtgtttcagagtggaggaagtcaactggaacaaatggaacagcaacctg
ggcaaaatcaatgaggatccggggtgctgggatcgcgcccagcagcctgcagcgcacacc
ccgcccaacagagggaggagctggagaggctttttcacagagggcagtcggcagcaggca
tatcagtcctcagagatgaatcttctgaaccccccatcggtctaa
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