Notothenia coriiceps (black rockcod): 104963960
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Entry
104963960 CDS
T04920
Name
(RefSeq) pumilio domain-containing protein KIAA0020 homolog
KO
K14844
pumilio homology domain family member 6
Organism
ncc
Notothenia coriiceps (black rockcod)
Brite
KEGG Orthology (KO) [BR:
ncc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ncc03019
]
104963960
03009 Ribosome biogenesis [BR:
ncc03009
]
104963960
Messenger RNA biogenesis [BR:
ncc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
104963960
Ribosome biogenesis [BR:
ncc03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
104963960
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CPL
Asp
TAXi_N
A1_Propeptide
PUF_NOP9
RXT2_N
Motif
Other DBs
NCBI-GeneID:
104963960
NCBI-ProteinID:
XP_010790960
UniProt:
A0A6I9PT91
LinkDB
All DBs
Position
Unknown
AA seq
765 aa
AA seq
DB search
MEAKSKKPFSPKGGKKFTQKGKDSMGTKLGGKPAGKKPFKAYDNTGGKPWKGGNGGNKDY
KPAFSKAGPGPQKRKMPFKAKDEGEGPEAKKLKDGEVKPNTEGLTEEEIKKNRQQAKRDL
KDSRQHAERKDMFDIIRQCKRLWGDLRRKNCDKELKTKLMGELHDLVRGKIKQGIVRIPL
NKHKSMREALREKGIELPYHDPALKYQPDEFSTSANMYINNYADTTYYGAISIGTPPQSF
QVLFDTGSANLWVDSIYCSTQACSEYEPTGGTMSRPQTEQENDKLQSRMEQLGQHAACTV
DLQKVLETLEDQELKENVEVMRNLQDIILELKSESEGITASIDAMAAGDGAELSGNGSSN
DDPQSVGVXSSIIEYAYNDKAVLAQRLMLTEELYGNTYTVCRSGVCNTIEKVAEANPDKL
ANIIEEMKQTLTPMAQKEQVIKHSLVHKVFLDYFLFAPEKQRTEMIESIRESVVYMAHTH
DGARVAMNCLWFGTAKDRKVIIKTMKTYMVKFATGEFGHLVLLAMFDCVDDTKLVKQAVL
SEVLLSLDEVIGNKYGKKVLLYLLTPRDPAHLLPEIIKVLARGDGNTHSKKDMAVRRKEL
LEVVSPPLLEHLRTNADTMVIDKASSVTISDILASACGDLRPAMTAVAQLANQELVPGGI
DGQLHMAEHPAGHLVLKWLLEQDMTLAEAGKEERFSRILVDAVGTDKLKSWVKVNRGAMV
LCSLLNSYEKSVAAEVKEALQSIKGELSSLANNKGAEILLENLNK
NT seq
2298 nt
NT seq
+upstream
nt +downstream
nt
atggaggctaaatcgaagaaacccttttctcctaaaggtggaaagaagtttacacagaaa
ggaaaagattcaatggggaccaaacttggaggaaaaccggctggtaagaagcccttcaaa
gcgtatgacaacacagggggcaaaccgtggaagggtggaaatggcggaaacaaagactac
aaacctgctttctccaaagctgggcctggtccgcagaagagaaaaatgccatttaaggcg
aaagacgaaggcgaaggcccagaggccaagaagttgaaggatggcgaagttaagccaaac
acagaagggctgacggaggaggagatcaagaagaacaggcagcaggcgaagagggatctg
aaggacagcaggcagcacgcggagaggaaggacatgttcgatatcatccgtcagtgcaaa
cgcctgtggggcgacctcaggaggaagaattgtgacaaagagctgaagaccaaactgatg
ggggagcttcacgatctggtccgcgggaagatcaagcagggaatcgtcaggatccctctg
aataagcacaagtctatgcgtgaggccctgagagagaaggggattgagctgccttaccat
gatccggctctcaagtaccagcctgatgagttttccacctctgccaacatgtacatcaat
aactacgcagacaccacctactatggcgccatcagtattggaacacccccccagtccttc
caagtgctctttgacaccggctctgccaacctgtgggtggactccatctactgtagcact
caggcctgcagtgagtatgaaccaacaggcgggactatgtctcgaccacagacggaacag
gaaaatgacaaactgcaaagcagaatggagcaactggggcaacatgcagcatgtacagtg
gatcttcagaaagttctggagacattggaggaccaggagttgaaggagaacgttgaagta
atgagaaacctgcaggacattatcttggagctcaagagtgagagtgaaggcatcactgcc
tccattgatgctatggctgcaggagacggagctgagctgtctgggaatggcagtagcaat
gacgatccacaaagtgtgggggtcgnctcgtccatcatcgagtacgcctacaacgacaaa
gccgtgttagcgcagagactgatgctcactgaggagctgtacgggaacacctacaccgtc
tgcaggtctggagtatgtaacaccatcgagaaagtggccgaggcgaacccggacaagctg
gccaacatcatcgaggagatgaagcagaccctcactcccatggcccagaaagaacaagtc
atcaaacactctctggtccacaaagtcttcctggactacttcctgtttgcacccgagaaa
cagagaacggagatgatcgagtccatcagagagtcagtcgtctacatggctcacacacac
gacggagcccgagtggccatgaactgtctgtggttcgggacggccaaggacagaaaagtc
atcatcaaaactatgaagacctacatggtgaagtttgccacgggagagttcggtcacctg
gttcttctggccatgttcgactgtgtggacgacaccaagctggtcaaacaggccgtgctc
tctgaagtcttgttgtctctggatgaggtcatcggtaataaatacggtaagaaggttctg
ttgtacctgctgacccccagagaccccgctcacctgctgccggagatcatcaaggtgctg
gcgcgaggagacgggaacacacacagtaaaaaggacatggcggtccggcgaaaggagctg
ctggaggtcgtctcccccccgctgctggagcatctccgtaccaacgccgacaccatggtg
atagacaaggcgtccagcgtcaccatcagtgacatcctggcgtcggcctgcggggatctg
cggcccgccatgacagccgtggctcagctggccaatcaggagctggttccaggggggata
gacggacagcttcacatggccgagcacccagcaggacacctggtgctgaagtggctcctg
gagcaggacatgacgctggcagaggccggcaaggaagagcgcttcagcaggattctggtg
gacgcagtgggaacagacaaactgaagagctgggtcaaagtcaacagaggagccatggtg
ctctgcagcctcctgaacagctatgagaagtctgtggctgcggaggtgaaggaggcgctg
cagtccatcaaaggagagctcagcagccttgccaacaacaaaggagctgagatcctgctg
gagaacctcaacaagtag
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