Notothenia coriiceps (black rockcod): 104964056
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Entry
104964056 CDS
T04920
Symbol
atg4d
Name
(RefSeq) cysteine protease ATG4D
KO
K08342
cysteine protease ATG4 [EC:3.4.22.-]
Organism
ncc
Notothenia coriiceps (black rockcod)
Pathway
ncc04136
Autophagy - other
ncc04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
ncc00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
104964056 (atg4d)
04136 Autophagy - other
104964056 (atg4d)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ncc01002
]
104964056 (atg4d)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ncc04131
]
104964056 (atg4d)
03029 Mitochondrial biogenesis [BR:
ncc03029
]
104964056 (atg4d)
Peptidases and inhibitors [BR:
ncc01002
]
Cysteine peptidases
Family C54: Aut2 peptidase family
104964056 (atg4d)
Membrane trafficking [BR:
ncc04131
]
Autophagy
Autophagosome formation proteins
Atg8 conjugation proteins
104964056 (atg4d)
Mitochondrial biogenesis [BR:
ncc03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
104964056 (atg4d)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Peptidase_C54
LssY_C
Motif
Other DBs
NCBI-GeneID:
104964056
NCBI-ProteinID:
XP_010791075
UniProt:
A0A6I9PTJ6
LinkDB
All DBs
Position
Unknown
AA seq
499 aa
AA seq
DB search
MNSVSPSAVQYVGVVMQEELVESRRPQPLERQGSFGLRPAPTTEPGREANGEPDELDKLK
SKLMTAWNNVKYGWTVKSKTSFNKTSPVIVLGNSYLLNSEDEVERFRLAFVSRIWLTYRR
EFPQLDGSTLTTDCGWGCMLRSGQMLLVQGLLVHLMPRDWAWPDAQQLTEVDFEVFRPRS
PARAGGVPIPSFGSPRGSNTPEKSLASDQVPKCSQKNRPEYRRDSQAETLHHKLVSWFGD
QPPAPFGLHQLVDIGKSSGKKAGDWYGPSIVAHILRKAVAKTSVLHNLAVYVAQDCTVYK
EDVVHLCDLSLSQTPPDPSSQAWKSVLILVPVRLGGEVLNPSYIECVKNILKLECCIGII
GGKPKHSLYFVGFQDEQLLYLDPHYSQPLVDVSQVNFSLESFHCSSPKKMPFNRMDPSCT
IGFYARDKKDFESLCSAVSEALSSSKEKYPIFTFVEGKSQDFGLQGHGSNNSGPAAHILP
PGRQGMMNNRRNSDEFVFL
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
atgaactcggtttcccccagcgcagtacagtacgtgggggtggtgatgcaggaggagctg
gtggagagccggaggccgcagcccctcgagcggcagggcagcttcggtctcaggccggcc
ccgaccacagagcccggcagagaggccaacggagagccggacgagttggacaaactgaaa
tccaaactgatgacagcgtggaacaacgtcaaatatggctggactgtcaaatctaaaact
tcattcaacaaaacctcgccagtaatcgtcctgggaaactcctatctgctcaacagtgaa
gatgaggtggagcggtttcgtctggcctttgtctccaggatctggctgacctacaggagg
gagttccctcagctggacggctccaccctgaccacagactgtggctggggctgcatgctg
cgcagcggccagatgctgctggtgcaggggctgctggtccatctgatgcccagagactgg
gcttggccagacgctcagcagctcactgaagtggactttgaggtgttcagaccgcgctcc
ccagcccgggcaggaggggtccccatcccctcctttggctctccacgcggatccaacacg
cctgaaaagtccctggcgagtgatcaggtacccaagtgcagccagaagaatagacctgag
tatagaagggacagtcaggcagagaccctccaccacaagctggtctcctggttcggggat
cagccgcctgcacctttcgggcttcaccagctggtggacatcggtaaaagttcagggaag
aaggctggagactggtacggaccctctatcgtggctcacatactacggaaagcagtagcc
aaaacctctgtgctccacaacctggctgtatatgtggctcaggattgtacagtgtacaaa
gaggatgtggtgcatttgtgtgacctgtcgctgagccagaccccgcctgacccatccagc
caggcctggaagtccgtcctcattctggtgcctgtacggctcgggggggaagtcctcaac
ccgtcctacatcgaatgtgtcaagaacatcctgaagctggagtgttgtattggaatcatc
ggaggcaaaccgaagcattcactatacttcgttggcttccaagacgagcagctgctgtat
ctggaccctcactacagccagcctttggtggatgtgtcacaagtcaacttctcactggag
tcgttccactgtagctctcctaagaagatgcccttcaaccgcatggatcccagctgtacc
atcggcttttatgccagggacaagaaggactttgagtctctatgttctgctgtcagtgag
gccctgtcatcatcgaaggagaagtaccccatctttaccttcgtagagggcaagagtcag
gattttggacttcagggccacggcagcaataacagtggacctgcagcccacatcctgccc
cccggcagacagggcatgatgaacaacagaagaaacagtgatgagttcgtcttcctgtag
DBGET
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