Notothenia coriiceps (black rockcod): 104964447
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Entry
104964447 CDS
T04920
Name
(RefSeq) neuronal acetylcholine receptor subunit alpha-2-like isoform X1
KO
K04804
nicotinic acetylcholine receptor alpha-2
Organism
ncc
Notothenia coriiceps (black rockcod)
Pathway
ncc04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
ncc00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
104964447
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ncc04040
]
104964447
Ion channels [BR:
ncc04040
]
Ligand-gated channels
Acetylcholine (nicotinic)
104964447
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Ortholog
Paralog
GFIT
Motif
Pfam:
Neur_chan_memb
Neur_chan_LBD
Motif
Other DBs
NCBI-GeneID:
104964447
NCBI-ProteinID:
XP_010791534
UniProt:
A0A6I9PKC1
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All DBs
Position
Unknown
AA seq
550 aa
AA seq
DB search
MGHNHLFSVGTAFLCSLLLCESVLCFEKTHSHAEDELFKTLFAGYNKWSRPVPNISDVVI
VKFGLSIAQLIDVDEKNQMMTTNVWLKQEWNDYKLRWKPSDYDNVTSIRVPSELLWVPDI
VLYNNADGEFAVTHMTKAHLFHNGKVRWVPPAIYKSSCSIDVTFFPFDQQNCKMKFGSWT
YDKAKIDLEKTEAVDLNNYWESGEWAIINAVGTYNTKKYDCCHEIYPDITYFFIIRRLPL
FYTINLIIPCLLISCLTVLVFYLPSDCGEKITLCISVLLSLTVFLLLITEIIPSTSLVIP
LIGEYLLFTMIFVTLSIVITVFVLNVHHRSPSTHKMPRWVHSVFLDMIPRWLFMRRPAPD
VRRRRLLLLQQEAAADRRQARLAGFKHGNCLSTSANWLRDGTSSQDPKRSSYEDLELGTL
TSYFSFRPPSPRPPGSTPPTQQKNQQNSQNQQEGATGANRQRLNTIQRAIKGDNTVSDST
FLLSPSVIRALEGVHYIADHLRAEDADFSVKEDWKYVAMVIDRIFLWMFIIVCLLGTIGL
FLPPWLAGMI
NT seq
1653 nt
NT seq
+upstream
nt +downstream
nt
atgggacacaaccacctgttctctgtggggacggcttttctctgctccctactgttgtgt
gagtcagttctttgttttgagaagacccactcgcacgctgaggatgagctcttcaagacg
ctgttcgccgggtacaacaagtggtcgagacccgtgcccaacatctctgacgtggtcatc
gtcaagttcggactgtccatcgcacagctcatagatgtggatgagaagaaccaaatgatg
acaactaacgtgtggcttaaacaggagtggaatgactacaaacttcgctggaaaccgtcc
gattacgacaatgtgacgtccatcagagtgccgtcagagctcctatgggtgccagacatc
gtcctctacaacaacgctgatggcgagtttgctgtgacccacatgacaaaagctcaccta
ttccacaacggtaaagtccgctgggtgcctcctgccatctacaaaagctcctgcagcatc
gacgtcaccttcttccccttcgaccaacagaactgcaaaatgaaatttggctcgtggacg
tacgacaaggccaagattgacctggagaaaacggaagcagtggacctgaacaactactgg
gagagcggcgaatgggccatcatcaacgcagtggggacgtacaacaccaagaaatacgac
tgctgccacgagatctacccagacatcacctacttcttcatcattcggaggctgcccctg
ttttacaccatcaacctcatcatcccctgcctgctcatctcctgcctcactgttctggtg
ttctatctgccctcagactgcggggagaagatcaccctgtgcatctccgtgctgctgtcc
ctcactgttttcctcctcctcatcaccgagatcatcccctccacctccctcgtcatcccg
ctgatcggagagtacctcctcttcacaatgattttcgtcaccctctccatcgtcatcact
gtgttcgtgctcaacgtgcaccatcgctctcctagcactcacaagatgccccgctgggtc
cactccgtgttcctggacatgatcccgcgctggcttttcatgcggcggcccgcgccagat
gtccgccgtcgcaggctgttgctgctgcagcaggaggcggcggccgaccggaggcaggcc
cgattggccgggttcaaacatggcaactgcctcagcacctcggccaactggctaagagac
gggacatcctcacaggaccccaagagaagctcttatgaggacttagagctggggaccctg
acgtcatatttctcctttcgccctccttcgcccagacctccggggtccactcccccgacc
caacagaaaaaccaacagaacagccagaaccagcaggagggggcgacgggggcaaacaga
cagagactcaataccattcagagggccattaaaggagataacacagtatcagactcaact
ttcctgctctcaccaagtgttatacgtgctctggaaggggtgcactacatcgcagaccac
ctgagggccgaggatgctgacttcagcgtgaaagaggattggaagtatgtcgccatggtg
attgaccgcatcttcctgtggatgttcattattgtgtgcctgcttgggaccatcggcctc
ttcctacccccttggctagctggcatgatctag
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