Notothenia coriiceps (black rockcod): 104964453
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Entry
104964453 CDS
T04920
Name
(RefSeq) paired amphipathic helix protein Sin3a-like
KO
K11644
paired amphipathic helix protein Sin3a
Organism
ncc
Notothenia coriiceps (black rockcod)
Pathway
ncc04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
ncc00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
104964453
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ncc03036
]
104964453
Chromosome and associated proteins [BR:
ncc03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
Sin3A-HDAC complex
104964453
REST complex
104964453
Heterochromatin formation proteins
Other heterochromatin formation proteins
104964453
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sin3a_C
Sin3_corepress
PAH
Motif
Other DBs
NCBI-GeneID:
104964453
NCBI-ProteinID:
XP_010791541
UniProt:
A0A6I9Q1V0
LinkDB
All DBs
Position
Unknown
AA seq
674 aa
AA seq
DB search
MFFEKVKKALRSSEAYDNFLRCLHIFNQEVISRAELVQLVIPFLGKFPELFTWFKNFLGY
RESFHGESSHTESLPKERATEGIAMEIDYASCKRLGSSYRALPKSYQQPKCTGRTPLCRE
VLNDTWVSFPSWSEDSTFVSSKKTQYEEHIYRCEDERFELDVVLEANLSTIRALEAVQRK
ISRMSAEEQLRFKMDNTLGGSSEVIHRKAIQRIYGDKANDIIDGLKKNPAVSVPIVLKRL
KMKEDEWRDAQRGFNKIWRDQNEKYYLKSLDHQGINFKQNDTKVLRSKTLLNEIEMLYDD
RQERASEETATLLVTGPHLTQTYEDSQILEDAAALIIHHVKRQVGIQKEDKYKIKQIIHH
FIPDLLFARRGELSDVEEEEEEEEEEEDMEMDSEGPKKHNGLPGSSPSKSKLLFSNTAAQ
KLRGTDEAYSLLFVNNYWYIFLRLHHILCTRLLRIYGQAEKQIEEDAREREWEREVLGFK
REKNENPAIQLKMKEPLDVDVEDYYSVFLEMVRNLLDGNMEPIQYEDSLREMFTIHAYIA
FTMDKLIQSIVRQLQHLVTDDVCARVTDLYLSESANKSSGGPLSTQTSRATAEGSYQRKA
EQLMTDENCFKLMFVKSRGSVSLAVELLDTEEDNSDEPAEAERWSDYVGRYLNSDSASPE
LREHLSQTPVFLPR
NT seq
2025 nt
NT seq
+upstream
nt +downstream
nt
atgttctttgagaaggttaagaaagctctgcggagctctgaggcgtacgacaacttcctg
cggtgtcttcacattttcaatcaggaagtgatctctcgggctgagcttgtccagttggtc
atcccatttcttggaaaattcccggagctttttacatggttcaaaaacttcctgggctac
cgggagtcgtttcacggggagtccagccacacagagagtttacctaaggagcgtgccaca
gagggcatcgccatggagatcgactacgcgtcctgcaagaggctggggtccagctacaga
gccctgcccaagagctaccagcagcccaagtgcacaggaaggacgccgctgtgtagagag
gtccttaatgacacttgggtgtcgtttccatcgtggtctgaagattctacatttgtgagc
tccaagaagactcaatatgaggagcacatttacagatgtgaggatgagcgctttgagctg
gatgtggtgttggaagccaacctctccacgatacgagccctggaggcggtgcagcggaag
atttctcgcatgtccgctgaggagcaactgcgctttaagatggacaacacactgggtgga
tcctcagaggtcatccatcgcaaggctattcagaggatatatggagacaaggccaacgac
atcattgacgggctcaagaagaacccagctgtgtccgttcccatagtgctgaaaagatta
aaaatgaaggaggacgagtggagagacgcccagagaggcttcaacaaaatctggcgggat
cagaatgaaaagtattacctaaagtcactcgaccaccagggcatcaacttcaagcagaat
gacaccaaagtgttacgttcaaagaccttactgaatgaaattgaaatgctatatgatgac
cgccaggagcgagcgtcagaggaaactgccacgctgctagtaactggccctcacctgacc
cagacctatgaagacagccagatcctggaggacgctgctgccctcatcatccaccacgtc
aaaagacaggtgggcatccagaaagaagacaagtacaagatcaagcagatcatccaccac
ttcatcccggacctgctgttcgcacggagaggggagctctctgatgtcgaggaggaggaa
gaagaggaggaggaagaagaagacatggagatggattcagagggccccaagaagcacaat
ggcctgccaggcagcagcccgtcaaagtccaaactcctcttcagcaacacggcagctcag
aagctgcggggcacagacgaagcctacagcctgttgttcgtgaacaactactggtacatc
ttccttcgtcttcatcacatcctctgtacgcgtttgctacgcatctacgggcaggctgag
aaacagatagaggaggacgcccgggagcgagagtgggaaagagaagtgttaggcttcaaa
agggaaaaaaatgaaaacccagcaatccaactgaagatgaaggagccactggatgttgat
gttgaggactattactcggtgttcctggaaatggtgcgtaatcttctggatgggaacatg
gagccgattcagtacgaggactccctgagggaaatgtttactatccatgcctacattgcc
ttcaccatggacaaactcatccagagcatcgtccggcagctccagcacctcgtcactgat
gatgtatgtgcacgtgtaacggacctgtacctgagcgaaagtgccaacaaatcctcgggg
gggccactgtccacgcagacgtccagggccacagcagagggctcctaccagcgcaaagca
gagcagctaatgacggatgaaaactgcttcaagttgatgtttgtaaagagccgaggatct
gtcagtctggccgtggagctgctggacacggaagaggacaactctgatgagccagcggag
gcagagaggtggtcagactacgtgggcagatacctgaactcagactctgcgtcccctgag
ctgcgtgagcatttgtcccagacgccggtgttcctccccaggtga
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