Notothenia coriiceps (black rockcod): 104964511
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Entry
104964511 CDS
T04920
Symbol
prdm4
Name
(RefSeq) PR domain zinc finger protein 4
KO
K12463
PR domain zinc finger protein 4 [EC:2.1.1.-]
Organism
ncc
Notothenia coriiceps (black rockcod)
Brite
KEGG Orthology (KO) [BR:
ncc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ncc03000
]
104964511 (prdm4)
Transcription factors [BR:
ncc03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
104964511 (prdm4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRDM2_PR
Zn_ribbon_PRDM4
zf-H2C2_2
zf-C2H2
zf-C2H2_4
SET
VPS13_N
zf-C2H2_jaz
C2CH-3rd_BIRD-IDD
zf-H2C2_5
zf-C2H2_6
BSP_II
DUF7479
CCD97-like_C
FAM176
Motif
Other DBs
NCBI-GeneID:
104964511
NCBI-ProteinID:
XP_010791625
UniProt:
A0A6I9PUX6
LinkDB
All DBs
Position
Unknown
AA seq
879 aa
AA seq
DB search
MNDMNLSPVGMDQLSVPSVSASHLGLPTSPTHNPIPTPGMPVAIPSLGPSLGSLPSALSL
MLPMGPLSDRGVMCGLPERNYSLPPPPYPHLESSYFRHILPGILSYLADRPPPQYIHPSS
LNMDGTLSVSSNNPSGLDHYSGPGGPLEQGLVPMDSRQVSGQGDLHQPGPHELDSSGLAM
ESRVSSPMSPDRMGEELASMEGVGVVSVSDSQQQLGGGRQPQHEGLTGVDSSGGVMPLHG
PTVLELPVVMEPDHMGGRVGNTGGGGAGGLHTNGELNSGVVSVVLNQGQLEPVSLHGHSG
MGLEAVNVSPITAEVSLGPENNLVLVNSTLQLEDSTSNKENMVTAYTIWCTLCERSYTSD
CPEHGPVTFIPDAPIQSRARLSLPRPLCLRISVADEPLGVFARDVIPPRTCFGPMAGQHC
SNVDLSDWPEKDTPQIWKMYHNNVLEFYIVTTDENECNWMMFVRKARSREEQNLVAYSAN
GKLFFCTTTEIHPDQELLFYYSRDYCRLMGVPQVPEGQICQCGKECSSFSELKSHLGSHN
SNHSHNQPPHSHSPVQQDHSQQQQQQQLQQQQVQQQQQQQQQQQQQQQQQQQQHQEEKLA
NGTSSSSSSPWPCHAHAAGQLHSSSKGSSDRNSNNVTPRGKGQGHVREKKFKCSMCSRAF
ITSTRLNVHFMGHVGMKPHKCDYCSKAFSDPSNLRQHLKIHTGQKNYRCTVCEKLFTQKS
HVASHMLIHTVAEKFKCDLCERAFIRKHDLKQHMFSHTHERRIQCPKCNKHFLKNNHLKK
HMNSHEGRRDFVCEKCHKAFLTKYHLTRHLKICKGPKTERASRKEQELEEEEEDEEEEEE
EEEEEEDDGRGRGADSASNEDCGLDVGGYNSEKSLSPPH
NT seq
2640 nt
NT seq
+upstream
nt +downstream
nt
atgaacgacatgaacctgagtcctgtgggcatggaccagctcagtgtgccctcagtgagt
gccagccacctgggtctgcccacctcccccacacacaaccccattcctactccaggcatg
ccagtggccatccccagcctgggtccttccctgggatccctcccctcggccctctcgctg
atgctccccatgggtccgctgagtgacagaggagtgatgtgtggtctgccggagaggaac
tactctttgcccccgcctccgtacccccacctggagagcagctacttccgacacatattg
ccaggtatcctgtcctatctggcagaccgtccaccccctcagtacattcatcccagcagc
ctcaacatggatgggaccctgtctgtgtccagcaacaacccctcaggtttggatcactac
agtggccccggaggccccctggagcagggcctggtgcccatggactccagacaggtcagc
ggccagggggacctccaccagcccggccctcatgagctggactcttcaggattggccatg
gagtcgcgtgtcagcagccccatgtcccctgaccggatgggggaggagctggcctccatg
gagggagtcggggtggtgtcagtgtccgactcccagcagcagctcggaggggggaggcaa
cctcagcacgaaggactgaccggggtggactcgtccggcggggttatgcccctccatgga
cccactgttctcgaactacctgtggtgatggagccggatcacatggggggtcgagtgggg
aacaccggaggaggaggagcgggaggactccatacaaacggggaactgaactcaggcgta
gtcagtgtggtgctcaaccagggccagctggagccggtgtcgctccacggacactctggg
atggggctggaggcggtcaacgtgtcccccatcactgcagaggtgtccctggggccagaa
aacaacctggtgctggtcaactccaccctgcagctggaggactctacctccaacaaggag
aacatggtcactgcctacaccatctggtgcacgctgtgtgagcgctcgtatacctcagac
tgcccagaacacggcccggtcaccttcatcccagacgctccgatccaaagccgggcacgc
ctctctctgccgcgcccgctgtgcctgcgcatctcagtggctgacgaaccgctcggagtt
tttgcacgggacgtcattcctccaaggacctgctttggaccaatggcgggccagcactgt
agcaacgtggatctctctgattggccagaaaaggacacgccacaaatatggaagatgtac
cacaacaatgtgctggaattctacatcgtgacaacggacgagaacgagtgcaactggatg
atgtttgttcgcaaagcaaggagccgtgaggagcagaacctggtggcttactctgccaac
ggtaaactgttcttctgcacaaccacagagatccatccggaccaggagctgctcttctac
tacagcagagactactgcagactgatgggtgttcctcaagtgccagagggccagatctgc
caatgtggcaaagagtgctcctccttctccgagctcaagtctcaccttggcagccataac
agcaaccacagccataaccagcctccacacagtcacagcccagtgcagcaggaccactct
cagcagcagcagcagcagcaactgcaacagcaacaggtacagcaacagcagcagcagcag
cagcagcagcagcagcagcagcaacagcaacagcaacaacaccaggaagagaagctggcc
aatgggacctcaagctcctcctcctccccatggccctgccatgcccacgctgcaggacaa
ttacacagcagcagcaaaggcagcagtgatagaaactctaacaatgtaacacccagagga
aaaggtcagggtcatgttcgggagaagaaattcaagtgcagcatgtgttcccgggctttc
atcacatccaccaggctcaacgtgcacttcatggggcacgtgggcatgaaacctcacaag
tgtgattactgcagtaaggccttcagcgatcccagcaacctcaggcagcacctcaagatt
cacacaggtcagaagaactacagatgcactgtttgcgagaagttgttcacccagaaatcc
catgtggcgtcgcacatgcttatccataccgttgcggagaaattcaagtgtgacctctgt
gagcgagcattcatcaggaaacatgacctgaaacaacacatgttctctcatacacatgag
cgccggatacagtgcccaaagtgtaacaaacatttcctcaagaacaaccacctgaagaag
cacatgaactctcacgagggccgacgagactttgtctgtgagaaatgccacaaagctttc
ctcaccaaataccaccttacccgtcacctcaaaatatgcaaagggcccaagactgagaga
gcgtcgcggaaggagcaggaattagaggaggaagaagaagatgaggaggaggaggaggag
gaagaggaagaggaggaagatgatggtaggggaagaggagcagactcagccagcaatgag
gactgtggtttagacgttggaggatataactctgagaagtccctgtcaccccctcattga
DBGET
integrated database retrieval system
