Notothenia coriiceps (black rockcod): 104964552
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Entry
104964552 CDS
T04920
Symbol
exosc8
Name
(RefSeq) exosome complex component RRP43
KO
K12586
exosome complex component RRP43
Organism
ncc
Notothenia coriiceps (black rockcod)
Pathway
ncc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ncc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
104964552 (exosc8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ncc03019
]
104964552 (exosc8)
Messenger RNA biogenesis [BR:
ncc03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
104964552 (exosc8)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
104964552
NCBI-ProteinID:
XP_010791674
UniProt:
A0A6I9PKP1
LinkDB
All DBs
Position
Unknown
AA seq
277 aa
AA seq
DB search
MAAGFKIAEPLEYHRSFLKENCRPDGRELSEFRTTTLNIGSISTADGSALVKVGNTTVMC
GIKVELTNPLVEAPGKGFIVPNVDLPPLCSSRFRPGPPGEQAQAASQFIADVIESSELIQ
TEDLCIERGKLCWVLYCDMMCVDYDGNVLDACIIALLAALKNTKLPGVTINKDTGAPEVN
LEKRKGLNIHKHPVGASFCVFDDSILIVDPSAEEEGLSTSHLTVVTDEKERLCVVHKPGG
TPLSAEKLQECIGRATARQREIQKLVDKVIQSVKTAQ
NT seq
834 nt
NT seq
+upstream
nt +downstream
nt
atggcggctggtttcaagattgccgagcctttggagtaccacaggagctttctgaaagaa
aactgtcgacctgatggacgggagctgtctgaattcagaacaacaacactaaacataggg
tccatatccacagcagatggctccgctctggtgaaagttggaaacacaacagtgatgtgt
gggatcaaagtggagctgaccaaccctttagtggaggcacctggtaaaggtttcatcgtg
cccaacgtggacctgccaccgctgtgttcgtccaggtttcgtccgggtccaccaggagaa
caagcgcaggctgccagccagttcattgctgatgtaattgaaagttctgagttgatacaa
acagaagacctgtgtattgaaagaggaaagctctgctgggtgctctactgtgacatgatg
tgtgtggactacgatgggaacgtgttggacgcttgtatcatcgccctgctggctgccctc
aagaacacaaaactcccaggggtcaccatcaacaaagacactggagcaccagaagtgaat
ttagaaaagagaaagggcctgaatattcacaaacatcccgtcggagcctctttttgtgtc
ttcgatgactccatactgatcgtagacccctcagctgaggaggagggtttgtcgacctct
cacctcaccgtggtgaccgatgagaaagagcggctctgcgtcgtacacaaaccaggtggg
acgccgctgtcggccgagaagctgcaggagtgcatcggcagagcaacagcgcgacagaga
gagatccagaaactcgtcgataaagtcatacagagtgtaaagacagcacaataa
DBGET
integrated database retrieval system
