Notothenia coriiceps (black rockcod): 104964696
Help
Entry
104964696 CDS
T04920
Name
(RefSeq) chondroitin sulfate proteoglycan 5-like isoform X1
KO
K08116
chondroitin sulfate proteoglycan 5
Organism
ncc
Notothenia coriiceps (black rockcod)
Brite
KEGG Orthology (KO) [BR:
ncc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
ncc00535
]
104964696
Proteoglycans [BR:
ncc00535
]
Cell surface proteoglycans
Others
104964696
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Neural_ProG_Cyt
Cadherin_C_2
PIRT
PFF1_TM
DUF6377
Motif
Other DBs
NCBI-GeneID:
104964696
NCBI-ProteinID:
XP_010791846
UniProt:
A0A6I9Q2L1
LinkDB
All DBs
Position
Unknown
AA seq
634 aa
AA seq
DB search
MARSDSRLDTWQVLLTISMVIIPLSAHGRHSLSRHHHHHNQSSVNKEALNARMVLSDDSA
ERDHLIGLGAKLPVSSTKHHHSHKHAHLDVVDEDPPVGEELTAGGAGPDQPGNPMSDEVI
TVEFHSPAPDGVPADGDLDWAKAPQPQKQKGGDPTAWTLSDFYDYLSPDNDPSALDATPE
PEPTPSPPPDMEDENPLLAGSPAVPDNVRSDVEPSIPAPSMPAPDTGDGLGLGGAMGADG
CRLGYVRSGPGVCVSQCDIEPNFCLNGGVCTVVAGMGAFCRCNVQEYIWNKGTRCDWAIT
EFQVMCVLVGVASVVLIFLFMIIVCFAKKLHRLKNENKRLRKRRCVTGSKYRPQSSEPQT
DGLSVSTMADGSQPNDDPQKQEDPAKSAQAKEEGSMNILNSHSPKHENNRPTSVAHDPGH
TPNNTEENAEDGVTIGLEVLLPKEAKLHSETGSPLQYDVFLYKVPNSEDSTSPIHAPPTQ
SGNSYSSSHPMPKSPKTPKTPKVHKSPKHSREHSHSSREALSGRHSSPGRHPSPGRHPSP
SRHSATSSCHPPSHHSPSRYTSFPPSSSSSTPPELRRPRGRSQALGSERSGTGREHHGGH
LHPSPSSPHLTQPSPSPSRVKCSPVSTRSLPVLS
NT seq
1905 nt
NT seq
+upstream
nt +downstream
nt
atggcgcgcagtgacagtcgtttggacacctggcaggtgcttctgaccatctccatggtc
atcatcccgctgtctgctcacgggaggcattctctgtcaaggcaccatcatcaccacaac
caatcatctgtcaacaaggaggccttgaacgcccggatggtgctcagtgatgactcagca
gagagggaccacctgatcggcctcggggctaaactcccagtcagctccaccaaacatcac
cattctcataaacatgcccacctagacgttgttgatgaagacccgcctgtgggggaggag
ctgactgccggaggcgcggggccggaccagcccggaaaccccatgtctgatgaagtcatc
accgtggagtttcacagccctgcccctgacggtgtgcccgctgacggtgatctggactgg
gccaaagcccctcaaccccagaagcaaaaaggaggagacccaactgcctggacgctttct
gacttttacgactacctttcccctgacaacgacccctcagccctggatgccaccccagaa
cctgagcccaccccttcacccccgcctgacatggaagatgaaaatccgctcctggctggt
tctcctgctgttcctgacaacgtgaggtctgacgtggagccctccataccagctccctcc
atgccagcgccagacacaggtgatgggttagggttagggggcgccatgggggccgacggc
tgcaggctgggctatgtgcgctctggacctggagtctgtgtgtctcagtgtgacattgaa
cccaatttctgcctcaatggaggagtttgcaccgtggtggcaggaatgggagctttctgc
aggtgcaatgtgcaggagtacatctggaacaaaggcacacgctgtgattgggcgatcaca
gagttccaggtgatgtgcgtgctggtgggcgtggcttcagtggtactcatcttcctcttc
atgatcattgtgtgctttgccaagaagctgcaccgtctcaagaacgagaacaaacgcctt
cgcaaacgcaggtgtgtgactgggagtaaataccgcccacagagcagcgagccacagaca
gacggcctctccgtgtccaccatggccgacggctcgcagccaaacgatgaccctcagaag
caggaagacccagcgaagtccgcccaagccaaggaagagggttcaatgaacatcctcaac
tctcactcccccaaacacgagaacaaccgtccgacctctgttgcccacgacccgggccac
acccctaacaacacagaggaaaacgcagaggatggagtcacaattggcctggaggtgctc
ctccccaaagaggccaagctccactcagagaccggctcgccccttcaatatgacgtcttc
ctctacaaggttcccaacagtgaagactccacctctcccatccacgcccctcccacacag
agcggcaactcatactcctcctctcaccccatgcccaaatcgcccaaaacacccaagacg
cccaaggtgcataaatcacccaaacacagcagggagcactcacacagcagccgcgaagcc
ttgtctgggaggcactcctcacccggacgtcacccctcacccggacgtcacccctcaccc
agccgtcattctgctacaagttcctgccatccaccctcccatcactccccctcccggtac
actagcttccccccctcctcctcctcctccaccccacctgagttacgcaggcccagaggt
cggtctcaggccctgggctctgagcgctctgggacagggagagagcaccacggtggacac
ctccatccttccccctcctctccccacctcacccagccttctccatccccatccagggtg
aagtgcagcccggtcagcaccagatctctgcctgttctgtcctga
DBGET
integrated database retrieval system
