Notothenia coriiceps (black rockcod): 104964893
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Entry
104964893 CDS
T04920
Name
(RefSeq) gamma-aminobutyric acid receptor subunit alpha-4-like
KO
K05175
gamma-aminobutyric acid receptor subunit alpha
Organism
ncc
Notothenia coriiceps (black rockcod)
Pathway
ncc04080
Neuroactive ligand-receptor interaction
ncc04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
ncc00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
104964893
04082 Neuroactive ligand signaling
104964893
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ncc04040
]
104964893
Ion channels [BR:
ncc04040
]
Ligand-gated channels
GABA-A
104964893
BRITE hierarchy
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Ortholog
Paralog
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Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Motif
Other DBs
NCBI-GeneID:
104964893
NCBI-ProteinID:
XP_010792095
UniProt:
A0A6I9PWH5
LinkDB
All DBs
Position
Unknown
AA seq
555 aa
AA seq
DB search
MLSAKKKETVAAMRPAFVRTLFYFLCLVTCVRKISGQTKKDERIYPENFTRILDRLLDGY
DNRLRPGFGGPVTEVKTDIYVTSFGPVSDVEMEYTMDVFFRQTWVDRRLKYEGPIEILRL
NNLMVTKVWTPDTFFRNGKRSVAHNMTAPNKLFRIMKNGTILYTMRLTIIAECPMKLVNF
PMDGHACPLKFGSYAYPKTEMVYRWTKGPEHSVEVPPESSSLVQYDLTGQTVSSETIKSI
TGEYVVMTVYFHLKRKMGYFMIQTYIPCIMTVILSQVSFWINKESVPARTVFGITTVLTM
TTLSISARHSLPKVSYATAMDWFIAVCFAFVFSALIEFAAVNYFTNAQLERAKKKPAKCP
PGPQTTPVKVKDTEEVLQNPDSNGNLRKRMNYMSYQEASSHQRAQSTINVSGVGRARPLR
HLASGANGSSSAFSRTSPKSESLLSVASSSAQLVKSTPQAAASTPDVMAGTPCKQKANSS
SLQQLLGPKLEHFQMMGNKPEIKQTPCSQPTTAGMGGTSKIDKYARILFPVSFGAFNMVY
WVVYLSKDTAVAKGG
NT seq
1668 nt
NT seq
+upstream
nt +downstream
nt
atgctttctgccaagaagaaggagacggtggcagcgatgcgcccggcttttgttcggacc
ctattctactttttgtgtttggtgacttgtgtaaggaaaatctctggacagacaaagaag
gatgaaaggatctacccggagaattttacgcgtattttagaccgacttctggacggttat
gacaacaggctgcgacctggattcggaggtcctgtgactgaagtcaagactgacatttat
gtgacaagttttggacctgtctcggatgttgaaatggaatacaccatggacgttttcttt
cggcagacgtgggtggaccggaggttgaagtacgagggcccgatagagatattgaggctg
aataaccttatggtgactaaagtgtggacaccggacactttctttaggaatgggaagagg
tctgtcgctcacaacatgacggcccccaacaaacttttccgcatcatgaaaaatggcacc
atcctatacaccatgaggttgaccattattgccgagtgtcccatgaagcttgtgaatttc
cccatggatggacatgcatgccccctcaaatttggaagttatgcctatcctaaaacagag
atggtctatagatggaccaaggggcccgagcattcagtggaggtccctcctgagtcctcc
agcctcgtccagtatgatctcaccggccagacggtctccagtgaaaccattaaatccatt
acaggtgaatatgtggtgatgacggtctacttccacttgaaacgtaaaatgggctacttc
atgattcagacgtatatcccctgcataatgacagtaatcctctcccaagtgtccttctgg
ataaataaagaatcggtcccggcacgcacagtcttcggcatcaccactgtcctgaccatg
acaacactcagcatcagcgctcgccactcccttcccaaggtctcatacgccaccgccatg
gactggtttatcgcagtctgcttcgcctttgtcttctccgcgctcattgagtttgccgcc
gtcaactacttcaccaacgcccagctcgagcgggccaaaaagaagccggccaaatgtcct
ccaggcccccaaaccacgcctgtgaaggtcaaggacacagaggaagtgctgcagaatcct
gatagcaacggtaacctaagaaagcggatgaactatatgtcctaccaagaggccagcagt
caccagagagcccagtccaccatcaacgtttctggagtggggagagctaggccgctacga
catttagccagcggggctaacggcagctcctccgcgttctctcgcaccagtcccaaatct
gagagcctgctcagtgtggcctcctcctccgcccagctggtaaagagcacgccacaggct
gcagcctcaacaccagacgtgatggcgggaacgccgtgcaaacagaaagccaactcatcg
tctctgcagcagctgctggggcccaaactggagcacttccagatgatggggaacaaaccg
gagataaagcagacgccgtgctcccagcccaccactgctggtatgggaggaaccagcaaa
attgacaagtatgcacggatcttgttcccagtgtccttcggggcttttaacatggtttac
tgggtggtttacttatcaaaggacacagcggtggcgaaaggtggctag
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