Notothenia coriiceps (black rockcod): 104965050
Help
Entry
104965050 CDS
T04920
Symbol
abca12
Name
(RefSeq) ATP-binding cassette sub-family A member 12
KO
K05646
ATP-binding cassette, subfamily A (ABC1), member 12
Organism
ncc
Notothenia coriiceps (black rockcod)
Pathway
ncc02010
ABC transporters
ncc04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
ncc00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
104965050 (abca12)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
104965050 (abca12)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ncc02000
]
104965050 (abca12)
Transporters [BR:
ncc02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
104965050 (abca12)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
AAA_23
DUF4162
MukB
AAA_30
AAA_15
Mg_chelatase
Motif
Other DBs
NCBI-GeneID:
104965050
NCBI-ProteinID:
XP_010792292
UniProt:
A0A6I9PVX6
LinkDB
All DBs
Position
Unknown
AA seq
2200 aa
AA seq
DB search
MLPDGFPFSAMLKDITRVLAGESQENLMLMQETIQTTIELFQISLTDPRFTEQLSHLGSK
VCAVEQTESVRLLMLSLSIEPGQLCNTILPSLQMLVESLMMNTSYLSDAIFQTAIGEPKA
YILNSNWSSLLSQGLGFNTSNLSSLDINITSPGVVTVGELLRNETAFLVDVQKHMDFDPD
ALHLLMETILPNNNLEILSWLVNLRHCGSTEALEMKVTDLEMLKTFCSLSVEQWYSFSLL
MARHLNMEKLIYRMVLSEEMQGLVGVMLQMAEVITGMMKTFIPTIGQLQTFMASVQDLNL
GANQEFDQMARGHRSSISSKATFVTLSRALCSKGILALFGVSKLTAIMESNSSQPDQVRR
GEMIQRFKIPQDASPFCMNMYLDMVNTTGGAIAWAFLKPMLMGHILYTPDTPATRAIMEK
ANSTLNEFANLRKYSEDWIESSNYLVKSAVLLSQTLPMLQNSLGNSFVQRFIEMQTDINV
DTMKETLSNFSNMTAMLEKNKHIMDQVTTLSTLMVNLSSCITFDRYRGYDTADELNAAAQ
HLAKNRDLYASVIFKLPKDTDASRKRNARASSSTSTLPPKVSYTIRMHMDNLMRTDRVRD
PYFMKDHHISAQRTLRYNRGFVYLQENIDRAIIETQTGNRIEETAVQLQPFPYPCHYRDE
YLEAVAFVFPLMLMIAWVLFVADFVKKLVHERELRLHEYMKMMGVNPLSHFFAWFLECAS
YLVLTVSILTLVLKYGNILPHSNGFILFLYLCNYSLSILSFSYLVSSFFDKTYIAGLSGS
LLYILCFFPFIVVLAVETDLTFSQKSALSLFSPTCFSYASQYISRFESQGEGLQWSNSYT
SPIPGDTASFGWLCWLMLIDSILYFIIGCYIRMVFPGNYGIASPWYFPFKASFWADLCCC
CRSNSKVGRGLLFTNIMQKNQPVFSDDKGKGQSSLSSQTGEDFSELPVGVALHGLSKMYG
DRVAIQNLNVSFYEGHVTSLLGHNGAGKTTTMSLLTGLFAPTSGTIEVYGRDMQTNIDEI
RRELGVCMQYDVLFDHMTTKEHLLLYGQIKAPHWSQEELREQVRSTLEETGMYAHRHKLV
STLSGGMKRKLSISIAFIGGSRLVVLDEPTAGVDPCSRRNIWDIVIQHKKHRTVIMSTHH
LDEAEVLSDRIAFLERGGLKCCGSPFHLKDKLGQGYKLTLTKKVQNPDSEPIDNADLKAF
IQAHVPEARLKEAQGGDLVYSLPPFNSSNASSYRSLLTALDANLDALQLGGYGISDTTLE
EVFLQLTHGNSEDGSEEGPLSISETVSDTDSIDSFPSDSSGNIDNFGDKIKLTGSSTMSG
MALAWQQMTAILVKRFHHSRRDWKGLIAQILLPVLFMVFAMGLGSIKSDLQHYPELELSP
ALYNLGPSYSFFSNQNPSTSQLTDTMLSYPGIDNACLDKSNNPVCTRSASSWNSRGNGSK
AFSVCKCSRQEQVCDLDNFRPPHKEIPSSQIVYNLSGINVEKYLVATANDFIRNRYGGFS
FGESLPHDLKMDLTTVPKNRTLSKVWYNPEGHHTMPAYLNSLNNIILRSNLPADKDQREY
AISVSSHPYFGRADDEDSIIQGMLQIMVAMCVLTGYSITTASFAIYEVSEHHSGSKRLQH
ISGISEPMYWTVNFFYDMVMYLIPVTLTVAVIAAFQIPAFTEQHNLGAVTLLLVLFGFAT
FPWMYLLSGIFKDAEMAFIVYVCINLFISINTIMSTSILYFLSQISSRNSEVIQEVFRRL
SEAFLIFPQFNFGNGLMKLARMNIEVQLLSGYGIDAYKNPLSMDGLGWMFFSSFIEGVVF
FALRLLLNRLLIRKVRNLIFGRKTVHQVPQVPCETEDEDVVAEHQRVSSGAASTDVLQVN
QLTKVYQQFNKKLPAVNKISVGIPAGECFGLLGANGAGKTTTFKMLTGDVSPTDGTAQIR
DRDGRLVDIMECRNEGINIGYCPQVDALDDLLTGKEHLYFYARIRGISKKEIDGVVNYLL
KRLELSYHKDIITDSYSCGTRRKLSTALALIGHPKILLLDEPSSGMDPRTKRHLWKIISE
EVKGKCAVVLTSHSMEECEALCSRLAIMVKGQFCCLGSLQHIKNRFGSGFTVKMYLAEAS
CDAEAITVFMRSRFPSTYLKDQHSTMVEYHVPTAPGGVADIFDQLESNKNALQIKHFSVS
QTTLDEVFINFALGNIAMESISLNSEDGSDDLDSIKAVNI
NT seq
6603 nt
NT seq
+upstream
nt +downstream
nt
atgcttcctgatggctttccattctccgcgatgcttaaagatatcaccagagtgcttgct
ggtgaatctcaagagaacctgatgctcatgcaagagaccatccaaacaaccatcgaactc
ttccagatcagcctgacggacccacgattcaccgagcaactcagccacctgggatccaag
gtgtgtgcggtggagcaaacagagtctgtgcgtctgctgatgctgtccctctccattgag
cctggccagctgtgtaacactattctaccgagcctgcagatgttggttgagagtctgatg
atgaacacatcctatctgagcgatgcaatcttccagaccgccatcggagaaccaaaagcc
tacatcctcaattcaaactggtcctctctgttgagtcaaggcttaggctttaacaccagc
aacctgagctctttagacattaacatcacttcgccaggagtggtgacagtcggtgagttg
ctgaggaatgaaacagccttcctcgttgatgttcagaaacacatggatttcgatccagac
gctctccacctgttgatggaaacaatattaccaaacaacaatttagagatcctgtcctgg
ttggtcaacctgcgtcactgcggctccacagaagcattggaaatgaaagtgacagatttg
gagatgttgaagaccttctgctccttgtctgttgagcagtggtacagcttctcactgctg
atggctcgccacctcaacatggagaaactcatctacagaatggtgttgtctgaagaaatg
caaggcctggtgggagttatgctccagatggctgaggttataaccggcatgatgaaaaca
tttattcctaccatcggtcagcttcaaaccttcatggcctccgtccaagacctcaacctg
ggagccaaccaggaatttgaccaaatggctagaggacacaggtcaagcatttccagcaaa
gctacgtttgtcaccctctctcgagcgttgtgcagtaaaggtatcctggctctattcgga
gtctctaaactcaccgccatcatggaatcaaactcctcccaacccgaccaggtcaggagg
ggggagatgatccagaggttcaagatcccacaggatgcctctcccttctgtatgaacatg
tacctggatatggtcaacaccacgggcggagccatcgcctgggccttcctcaaaccaatg
ctgatgggtcacattttgtatacccctgacacacctgccaccagggccataatggagaag
gccaattccaccttgaatgagtttgcaaatctaaggaagtactccgaggactggatcgaa
tcctccaactacctcgtgaagtctgccgtgttactcagccaaactttgccaatgctgcag
aattccctcggcaattcctttgttcagagattcattgagatgcagacagacatcaatgtc
gacacaatgaaggagacgctcagcaacttctctaacatgaccgccatgctggagaaaaac
aaacacataatggatcaggtcaccaccttgtccaccctgatggtgaacctctcctcctgc
atcacatttgaccgttaccgtggctacgacactgctgatgagctcaacgctgcagctcag
cacctcgccaaaaaccgtgatctctacgcgagtgtcatcttcaagcttcccaaagacacg
gacgcatccaggaagcgtaatgccagggcttcctcttccacatccaccctgcctcctaaa
gtcagctacaccatccgaatgcacatggacaacttgatgcgcacagacagagtccgtgac
ccctattttatgaaggaccaccacatctcggcccagaggacgctgcgctacaaccggggc
tttgtgtacctgcaggagaacatcgatcgggcgatcatagagacccaaactggaaataga
attgaggagacagccgtccaactgcagcccttcccctacccctgccactacagggatgag
tacctggaggccgtcgcttttgtcttccctctcatgttgatgatagcctgggtgctgttt
gtggctgattttgtgaagaaactggtgcatgagagagagctgagactacatgagtacatg
aaaatgatgggagtcaatccgctcagccatttcttcgcatggttcctggagtgcgcctcc
tacttggtgctgaccgtctccatcctcaccctggtgctgaagtacggcaacattctgccc
cacagcaacggcttcatcctcttcttgtacctctgcaactacagtttgagcatcctgtcc
ttcagttacctggtcagctccttcttcgacaagacttacatcgctggcctcagcggcagc
cttctgtacatcctctgcttcttccccttcattgtggtcttggccgtggagacagatctc
accttttcccagaagagcgccctgagtttgttctccccaacctgctttagttatgccagt
caatatatctctcgattcgagtcccaaggagaaggcctccaatggagtaactcatacacc
tcgcccatacctggagacacggcttcgttcggttggctgtgctggctgatgctcatcgac
tccatcctctacttcatcatcgggtgctacatccgaatggtcttcccaggcaactacggc
atcgcttccccatggtacttcccattcaaagcatccttctgggccgacctgtgctgttgc
tgtaggtcaaacagtaaggtgggccgaggactcctcttcaccaacatcatgcagaaaaac
cagcctgtcttctccgatgacaagggaaaaggccagagcagtctttcctctcagactggg
gaggatttctcagagctcccagtaggcgttgccctccatggtctcagcaagatgtatggc
gaccgagtagctatccaaaaccttaacgtgtccttctacgagggccatgtcacctcacta
cttggtcacaatggagccggcaagactaccaccatgtctctcctgactggccttttcgcc
ccaacatctggcaccatcgaggtgtatggcagagacatgcagaccaacatcgatgaaatt
cgcagagagctaggagtgtgcatgcaatatgacgtcctgtttgaccacatgaccaccaag
gagcacctgctgctgtacggccagatcaaggcgccacactggtcacaagaggaactgcgt
gaacaagtccgctcgaccctagaggagacaggcatgtacgctcacagacacaagctggtg
agcacattgtcaggaggcatgaagcgcaagctgtcaatctccatcgccttcatagggggc
tctcgcttggtggttctggatgaacccaccgcaggagttgatccctgctccaggcgcaac
atctgggacattgttatccagcacaagaaacatcgcactgtcatcatgtccactcaccac
ctggatgaggctgaagtactcagcgaccgcatcgccttcctggagagaggcggattaaaa
tgctgcggatcccccttccacctgaaagacaaactgggtcagggctacaaactcaccctc
accaagaaggtccagaacccagattctgagccgattgacaatgctgacctgaaggccttc
atccaagctcatgtaccagaagccagactgaaggaggcccagggaggcgacctggtctac
tcactgcccccctttaactcatccaacgcttcctcctaccgctcccttctgactgcgctg
gacgccaacctggatgccctgcagctgggaggctatggcatctctgacaccaccttagag
gaggtgttcctccagttgactcacggaaactcagaagatggttctgaggaaggcccgctg
tctatctcagagacggtttctgacactgattccatcgacagcttcccctcggactcgagt
ggaaacatcgacaactttggtgacaagatcaagcttaccggatcatccacgatgagcggc
atggccctggcctggcagcagatgacagccatactggtgaagaggttccaccacagccgt
agggactggaagggcctgatcgcccagatcctgctccctgtgctcttcatggtgtttgct
atgggcctgggctccatcaagagcgacctgcagcactatcctgagctggaactcagccct
gcgctttacaacttaggaccgagctactctttcttcagtaaccagaaccccagcacctct
cagctgacggacaccatgttgtcataccccgggatcgataacgcctgcctcgacaagtct
aataacccggtctgcacaagaagcgcaagcagctggaattccagagggaacggctccaaa
gcatttagtgtctgtaaatgcagccgtcaggaacaggtttgcgaccttgacaacttccgg
cccccccataaagagatcccctcgtctcagattgtgtataacctcagtggtatcaacgtg
gagaaatacctggtggcaacagcaaatgatttcatcagaaacaggtatggtggcttttct
tttggcgagtcactccctcacgacttaaaaatggatttaacaacagtgcccaaaaaccgt
acactgtctaaggtctggtacaacccagagggccaccacacaatgccggcatacttaaac
agcctcaacaacatcatcttacgctccaatcttccagcagacaaggatcaacgagaatat
gccatttcagtttccagtcacccctatttcggccgagcggatgatgaagattcaattatc
cagggaatgctccagatcatggtggctatgtgtgtgctgacgggctattcaatcaccaca
gccagctttgccatctacgaggtcagcgagcaccacagcggctccaagaggctccagcac
atctctggcatcagtgagcccatgtactggactgtgaacttcttttatgacatggtcatg
tatttgatccctgtgaccttgactgttgctgtcatcgcagccttccagattccagcgttc
acagagcagcacaatctgggtgctgtcaccctgcttctggttctctttgggtttgccacc
ttcccctggatgtatctgttgtcaggcatcttcaaggatgcagagatggccttcatcgtc
tatgtgtgcatcaacctcttcatcagtatcaacaccatcatgtccacctccatcctgtac
ttcctgagtcaaatttcatccagaaactctgaggtcatccaggaggtcttcaggaggctg
agtgaggccttcctgatcttcccccagttcaactttgggaacgggctgatgaagctggcc
aggatgaacatcgaggtccagctgctcagtggctacggcatcgacgcctataagaacccg
ctctccatggacggcctgggctggatgttcttctcctccttcatcgagggggtggtcttc
ttcgccctgcgcctcctgctcaacaggctccttatacgcaaagtcaggaatctgattttc
ggcagaaagacggtgcatcaggtgcctcaggtgccttgcgagaccgaggatgaggatgtg
gtggcggagcaccaacgggtgtccagtggagcagccagcaccgacgtgctgcaggtcaac
cagctgactaaggtctaccaacagttcaataagaagctccctgctgtcaacaagatctct
gtgggcatccctgcaggagagtgttttggccttctgggagcaaacggagctggaaaaacg
accaccttcaagatgctgacaggagatgtgagcccgacggacggcaccgcacagatcagg
gaccgggatgggcgcttggtagacatcatggagtgccgaaacgagggaattaacatcggc
tactgtccccaggtggatgcattggacgatctgctcacaggaaaagagcacttatatttc
tatgctcgcattcgaggcatctcaaagaaggagatagacggggtggtgaactacctgctg
aagaggctggagctgagctaccataaagacatcattactgacagttacagttgcggcacc
cgcagaaagctctccactgcgctggctctcatcggacatcctaaaatccttctgctggat
gaaccgagctccggcatggaccctcgcacaaagcgtcacctgtggaaaatcatctctgaa
gaagtgaaaggaaaatgtgccgtggtcctcacctctcacagcatggaggagtgtgaggct
ctgtgcagccgtcttgccatcatggtgaaaggtcagttctgctgcctgggctccctgcag
cacattaagaacaggttcggcagcgggttcactgtgaagatgtacttggcagaggcctcc
tgtgacgctgaggcaatcactgtcttcatgcgaagtcgattccccagcacttatctcaag
gaccagcactccactatggtagagtaccacgtaccaactgctccaggaggggtggctgac
atctttgaccagctggagtccaacaagaatgctctgcagatcaaacacttctctgtgagc
cagaccacactggatgaggtcttcatcaacttcgccctgggaaacatcgccatggaatcc
atttcactgaacagtgaagacggatctgatgacctggactccattaaggcagtaaacatt
tag
DBGET
integrated database retrieval system
