Notothenia coriiceps (black rockcod): 104965083
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Entry
104965083 CDS
T04920
Name
(RefSeq) transcription factor Sox-14
KO
K09267
transcription factor SOX1/3/14/21 (SOX group B)
Organism
ncc
Notothenia coriiceps (black rockcod)
Brite
KEGG Orthology (KO) [BR:
ncc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ncc03000
]
104965083
Transcription factors [BR:
ncc03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
104965083
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
SOXp
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
104965083
NCBI-ProteinID:
XP_010792325
UniProt:
A0A6I9PX24
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All DBs
Position
Unknown
AA seq
236 aa
AA seq
DB search
MSKPADHIKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKLLSESEKRPYIDE
AKRLRAQHMKEHPDYKYRPRRKPKNLLKKDRYVFPLPYLGDTDHLKGLPMSAESLLCHSE
KARAFLPPTSPYSFLDPSQFTSSALQKMTEMPHGLSASSLPYASSLGYQNGAFGTLGCPS
QHTHTHPSPTNPGYVVPCNCTAWSTSSLQPPVAYILFPGMTKTGLDPYSSAHATAM
NT seq
711 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaagcctgctgaccacatcaagagacccatgaacgcgttcatggtttggtcccgg
ggccagaggagaaaaatggcccaggagaaccccaaaatgcacaactctgagatcagcaag
agactgggcgccgagtggaagctgctgtccgagtccgagaagagaccgtacatcgacgag
gctaagcggctgcgcgcccagcacatgaaggagcaccccgactacaagtaccggccccgg
cgcaaacccaagaacctgctgaagaaggacaggtacgttttcccgctgccttacctcggg
gacaccgatcacttgaagggactcccgatgtccgccgagtccctgctgtgccactcggag
aaagcccgagccttcctgccgccgacctccccgtactccttcctcgacccgagccagttc
acctccagcgccctccagaagatgacggagatgccccacgggctgagcgctagctctttg
ccgtacgcttcctctttgggataccagaacggcgcgttcggcacccttgggtgtcccagc
cagcacacccacacccacccatcgcccactaacccgggctacgtggtcccgtgtaactgc
acggcctggtccacgtccagtttacagcccccggtggcctacatactttttccaggtatg
accaagactgggctagacccatattcatccgcacacgccactgccatgtaa
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