Notothenia coriiceps (black rockcod): 104965233
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Entry
104965233 CDS
T04920
Symbol
supt20h
Name
(RefSeq) LOW QUALITY PROTEIN: transcription factor SPT20 homolog
KO
K21245
transcription factor SPT20 homolog
Organism
ncc
Notothenia coriiceps (black rockcod)
Pathway
ncc04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
ncc00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
104965233 (supt20h)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ncc03036
]
104965233 (supt20h)
Chromosome and associated proteins [BR:
ncc03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
SAGA complex
104965233 (supt20h)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spt20_SEP
Motif
Other DBs
NCBI-GeneID:
104965233
NCBI-ProteinID:
XP_010792495
UniProt:
A0A6I9PXC3
LinkDB
All DBs
Position
Unknown
AA seq
831 aa
AA seq
DB search
MQQVLEYALDRAEYIVESARQRPARRRNSSGGRKSLYQKLYELYIEECEKEPELKNLRRN
VNLLEKLVSQESVSCLVVNLYPGNEGYSLMLRGKNGSDSETIRLPYEEGELLEYLDAEEL
PPILVDLLEKSQVNIFHCGCVIVEVRDYRQSGNTKMPTYQSRHILLRPTMQTLICDVHAM
TSDHHKWTQDDKLQLESQLILATAEPLCLDPSISVTCTANRLLHHKQKMNTRSMKRCFKR
HSRAALNRQQELSHLPMPPQLRLFDYLQRRKERKPAPVIDLKISKIGNCVDMWKQSNCQL
TVPKEIDVEKYAVVERSLQLEDSQPNTVIWPAEEVIDDYTFECEVGGQAQRTKVSIYQSM
GDPLVYGKIYCAKEPKAEEDSTDLKLIHPPFLIGSKIDADRFLNQYKGVYEKDLKCQVKM
SHNSGTVAQGPPSPNKDEGDGISSLIQASVLGKGVKHRPPPIKLPSGSGNSSSGNPYSSQ
TTSGLLKCPTPPPAKSQSLNRKHSMELGQVGLLSPAALSPMGSTQRSGTPKPSTPTPTNT
PCSTPHPADSLCAPLSLTPTPSDPPMLQSLSQPTLLTPFAQQQLALSQQLPVMTIPLPAM
GTSITTGSTSPAGLNFINVVSSVCSPQTLMSGSSPMLGAGLNLSGILPPAGLMPTMQSAA
QTGSPFGLNSSAGLRPLNLLQIPTGPLIFNSLQQQQQQLSQFSPQQSQSATSSPQQQXTS
HCVHRLLLFDSTVLFLQGDQLDLTLGNQQTAVINLGVGGFMSPQAAVLSQLGCGLDGSGP
PLPSPRLQHQHQPQIQLQFLQHHAAAAANGYGSSGPSGGSTTATYRQPTKK
NT seq
2496 nt
NT seq
+upstream
nt +downstream
nt
atgcaacaagttttggaatatgcattggatcgagctgagtacatcgttgaaagtgctcga
caacgaccagccagaagaagaaattcatccggcgggaggaagagtttgtatcagaagctc
tatgagctgtacatagaggaatgtgagaaagagccagagttaaagaatttaagaagaaat
gtgaatctactggagaagctggtgtctcaggagtccgtatcatgtctggtggtcaacctc
taccctgggaatgaaggctattctttaatgctcaggggcaaaaatggctctgattctgaa
accatccgactgccatatgaagaaggagaactcctagagtacctagatgcggaggagttg
cctcccattctggtggatctgttggagaaatcacaggtgaacatcttccactgtggctgt
gtgatagtcgaggtgagagactacaggcagtctggtaataccaagatgcccacctatcag
agcagacacatccttctgcggccaaccatgcagactcttatctgtgatgtccacgccatg
accagtgaccaccacaaatggacacaggatgacaaactacagctggagagtcagttgatt
ttggccacagctgagcctctgtgcctggacccctctatttctgtcacctgcacagccaac
cgcctgctccaccacaagcagaaaatgaacactcgctctatgaaacggtgtttcaagagg
cactctcgagctgcactgaacaggcagcaggagctctcccatctgcccatgccaccacag
ctacgactcttcgactacctgcagaggaggaaggagaggaaacctgctcctgtaatagac
ctgaagatctcaaagatcggaaattgcgttgacatgtggaagcagagtaactgccaacta
actgtgccgaaggaaattgatgtggaaaagtacgctgtggtggagagatctctgcagttg
gaggactctcagcccaatactgtgatctggcctgctgaggaagttattgatgactacacg
tttgagtgtgaggtgggagggcaagcccagaggaccaaggtgtctatctaccagtcgatg
ggagacccactggtgtatgggaagatctactgtgctaaagaaccaaaagcagaggaggac
agcacagacctaaagctcatacatcccccgttcttgataggctccaagatagatgcagac
cggtttctcaatcagtacaaaggagtgtatgagaaagatttaaagtgtcaggtcaagatg
tcccataactcaggcacggtggcacaggggccgccctcccccaacaaggatgagggtgac
ggtatttcttcactgatccaggcgtctgttttggggaagggggtgaagcaccgaccccct
cccatcaaactgccttcaggatcaggcaacagctcctcaggtaatccatatagttcacaa
accaccagtggtctactcaagtgtcctacgccccctccagccaaaagccagtctctgaac
aggaagcactccatggagctgggccaggtgggcctgctgtcgccggccgccctctccccc
atgggctccacacagagatcagggacccccaagccatccacccccactcctacaaacacg
ccgtgctccacaccgcaccccgccgactccctctgcgctcctctctcgttgacccctacc
ccttcggacccccccatgcttcagagcttgtcgcagcccacgctcctcacgcccttcgcc
cagcagcaactggctctaagccagcagctgcccgtcatgaccatccccctgcccgccatg
ggaacgtccatcaccacgggaagcacctctccggcagggctcaacttcatcaacgtggtc
agctctgtctgcagtcctcagaccctgatgagtggctccagccccatgctgggtgcaggc
ctgaacctgagtggaatcctgccccctgcaggcctgatgcccaccatgcagtccgcagct
cagactgggagtccttttggcctgaacagcagtgctgggttgagaccgctgaacctcctg
cagatccccactggtcctctcatctttaactctctgcagcagcagcagcagcagctgtct
cagttctccccacagcagagccagtcggccacctccagccctcagcagcaggncacatct
cattgcgttcatcgtcttttactttttgattctaccgttctgtttctgcagggtgaccag
ttagatctaactttaggaaaccagcagacagccgtcatcaacctgggagtcggaggcttc
atgtctccacaagcagcagtgctgtcccagttgggctgtgggctggacgggtctgggccc
ccgctgccctctccaaggcttcagcaccagcaccagccacagatccaattgcaattcttg
cagcaccatgcagcagcagcagcaaatggctatgggagcagcggcccctcaggtgggagc
accacggcaacataccgccagccaaccaagaagtaa
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