Notothenia coriiceps (black rockcod): 104965274
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Entry
104965274 CDS
T04920
Name
(RefSeq) probable JmjC domain-containing histone demethylation protein 2C
KO
K11449
jumonji domain-containing protein 1C [EC:1.14.11.-]
Organism
ncc
Notothenia coriiceps (black rockcod)
Brite
KEGG Orthology (KO) [BR:
ncc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ncc03036
]
104965274
Chromosome and associated proteins [BR:
ncc03036
]
Eukaryotic type
Histone modification proteins
Histone demethylases
104965274
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
T6SS_Tle1-like_cat
Motif
Other DBs
NCBI-GeneID:
104965274
NCBI-ProteinID:
XP_010792534
UniProt:
A0A6I9PNG5
LinkDB
All DBs
Position
Unknown
AA seq
1523 aa
AA seq
DB search
MHLSARAAGRPGVKQTRAKSKKAKQAVNKRRKGEEEEKKASLKRLKTDITSDLSESSDSE
NPLNKRAALSSCSSSSSSSSSSSSSSSSSSSEPNSENELKTCISDVKQSAVSKKEEEEKP
LMPANKMNDSSSLIGRLSPWAELQEDTKKGVVKETSKITTKEEEELVAVTQITQSPRQQT
PVMPDSLQAGSMESSKNTVKVSSQSQTPAVSQPGGGAVTDITEEAQATVHQESSEAVSAL
LASQNAESTALSPYLPLNPSPVSSPPVPPSPSLSEGGRKAETEPSAQQQQHGLTGGGTTA
VRSSGNKMEFAPSEVIRPVTSMVENVLLVEKEKPVLPHHLQHQHHQQQQQQQQQQQQQQQ
QQQQQQQQQQQQQQQQQQHTQQKQHYTSVHPSINSPSLSEETRKPPQQHPPPNKMNAAIP
PDFKSKTSPNPAQLDSLKQKPQHSNNSQSHPYPNTTPAEPLKAKPHPGLLDSSKPKPNTS
PEVSKHKIQRYSGPSPPPIGRLSAKVEPAEPPRSCFKPVPVRLESGGVSSTKSPFIINKN
ETFTVYRDPALVRSAAENSVSVSISSNHVAAYLHPHLHTLHSPSPHSPCLTSASHPHTSH
LLAPPHTSALPHPHLLPPGVLPAMPPPTASLLGGHPRLDSPSGLGHLGLPHPAAVHQQQF
LQAQGPPLLAQAHSGAAGLGLYPILWQYPNGTPSSYPPGLNLPPTAKWVHPDNPVNSEVS
LRRNTTSPWLHQAGGGADGLGLLSHVPVRPASADPHRPSVKMNTHASPPLSKASMNAHKE
EMDKKGFVDPIRTLTLAQLKQEQSDRSRTPTGKEVHLHRLYMDPHSKARMDAFKAADRAV
KYKERIGRSVKEEHRVLPTMVRSSRFKRPGMDRTTQPPLILTPPSPTTELASNGSTNSSS
QHKQQQPNNNSSSSSTTTASSSTKQPASSEHHLTINNATAAGSHTCRRTGCVRQAGVAEP
EVTGIRWLRESKTCASSKRDKELYGWLKCVKGQPHDHKHLMPTQIIPGTVLADLVSSMHS
LREKHNIKSHCPCSTKQNLLTKLPATNGVSQVLQNVLNHSNKLSVLKTELCSQQNSDQGG
TKVETNGGGGGSSPSSDAGSAPVTPPESQSPLHFLADLAEQKSREEKKENKSVVLGKSVK
EDKVGDSLELLQQCKTTSLVANSTEQGSTLRDLLTTTAGKLKMGSTDAGIAFAPVYCNAA
QHGKGGRTMPNILDEIIASVVENKIPANRQNIASKLSIIKHEPVTPSNNNNPAPAITEDV
KPDRKKTAAAVSEESTNQYPDIPHCWLNNRRLLWLKDHRNHNNWKLFRECWRQGQPVLVS
GIHKRLNSALWKADSFNQEFADHQGDLLNCKDQVVSNSGIKEFWDGFEDITKRPKSKDGE
PMVYRLKDWPSGEEFMALMPSRYDDLMKNLPLPEYSDPEGNLNLASHLPSFFVRPDLGPR
LCCAYGVAASQDQDFGTANLHVEVSDVVSVLVYVGVAKGNGVLSKTGVLKRLEEEDLDEG
VRRRLKDSSETPGALWHIYLKKT
NT seq
4572 nt
NT seq
+upstream
nt +downstream
nt
atgcacctgtcggcgagggcagccggtcgtcccggcgtcaagcagacgcgcgcgaagtcc
aaaaaggctaagcaggcagtaaacaaacgcaggaagggcgaggaagaggagaagaaggcc
agtctaaagaggctgaagacggacataacctctgacctatcagagagcagcgactcagag
aacccactcaacaagagggctgccctctcctcgtgctcttcttcctcctcatcctcctcc
tcatcctcctcatcttcctcttcctcctcctcagagcccaactctgagaacgagctaaag
acttgcatcagtgatgtgaaacaaagcgctgtttccaaaaaggaggaagaggagaagccg
ctgatgccggccaacaaaatgaatgattcctcgtctctcattggtcgcctatccccgtgg
gcggagcttcaggaggacactaagaagggcgtggttaaggaaacgagcaaaattacaaca
aaagaggaggaggagttggtcgcggtaacacagatcacccagtctccacggcaacaaacg
cctgtgatgcctgacagtcttcaggcaggcagtatggagagcagcaagaacactgtgaaa
gtgtcctctcagtcacagacgccggcggtttcccagcccggcggcggcgctgtgaccgac
atcacagaagaggctcaggccacggtgcaccaggagagctccgaggcggtgtcagcgctg
ctcgcctcacagaatgcagagtccacggcactctcaccttacctccccctcaacccctcc
cctgtgtcctcgcctcccgtccctccgtctccttcgctttcagaaggaggccgcaaggca
gagactgagccttccgcacagcagcagcagcatggccttacaggaggcggcacgacagca
gtccggagctcaggaaacaagatggagtttgctccctctgaggtcatcaggcctgtcaca
tcgatggttgaaaatgtgttgcttgtggagaaggagaaacctgtccttcctcatcatctt
cagcatcagcatcatcagcagcagcagcagcagcagcagcagcagcagcaacagcagcag
cagcagcagcagcagcagcaacagcagcagcagcagcagcagcaacagcaacagcacaca
caacagaagcaacactacacatctgtccaccccagcattaatagcccgtctctgtctgaa
gagacgagaaaacccccccagcagcacccaccccccaacaagatgaatgcagccatccct
cctgacttcaaatccaaaaccagccccaacccagcccaactcgactccctgaaacagaaa
ccccagcactccaacaactctcagagccatccctacccaaacacaaccccagctgagcct
ctcaaagctaagccccacccgggcctgctggacagctccaaacccaaacccaacacctcc
ccagaggtctctaaacataaaatacagcgatactctggcccctcccctccgccgataggt
cgtttgtcagctaaagtagaaccagcagaacctccgcggtcctgcttcaagccagtgccg
gtgcggttggagtcgggtggggtcagcagcacgaagagccccttcatcatcaataagaac
gagacattcacggtttacagagaccccgccctggtgcgttcagccgcagagaactccgtc
tctgtcagcatctcctccaaccacgtggcagcttatctccacccccacctgcacactctt
cactccccttcccctcactccccctgcctcacctccgcatcgcacccccatacctcccat
ctccttgcccctcctcacacctctgccctacctcacccgcaccttttaccccccggggtt
ctccccgccatgcctccgcccacagcctctcttctcgggggccacccacgtcttgactcc
cccagcgggttaggtcaccttggtctgcctcacccagccgccgtacaccagcagcagttc
ctacaggctcagggcccccctctactagcccaggcccacagtggggccgctgggctgggc
ctctaccccatcctctggcagtaccccaacggaacaccttcttcctaccccccagggctc
aacctgccccccacagccaagtgggtccaccctgacaatcctgtgaattcggaagtgtct
ctcaggaggaatacaaccagtccgtggctgcaccaggctggggggggggctgatggtctg
ggtcttctgagccacgttcctgtacggccagccagcgccgatccccaccgcccctccgtc
aagatgaacacacacgccagccctccactgtcaaaggccagcatgaacgcacataaagag
gagatggataagaaaggctttgtggacccgatcaggacgctgacactcgcccagctgaag
caggagcagtcagacaggagtcgcacccccacagggaaagaagtacacctgcaccgcctc
tacatggacccccacagcaaggcccgcatggatgcgttcaaggcagcagatcgagcagta
aagtacaaagagaggatcggcagatccgtgaaggaggagcatcgagtgctccctaccatg
gtaagatccagccgcttcaagcgacccggcatggaccggaccacccaaccaccactcatc
ctcacaccaccttcacccacaacagaacttgccagcaacggcagcaccaacagcagcagc
cagcacaagcaacagcagcccaacaacaacagcagcagcagcagcaccaccacagcaagc
agcagcaccaaacaaccagcgagcagcgagcaccacctgacaatcaacaacgcaacagca
gcagggagtcacacctgtaggagaactggctgtgtacggcaggctggggtggcagagcca
gaagtgactggtatacgctggctgcgtgagtctaagacgtgtgcctcgagcaagagagac
aaagaactatacggctggctcaagtgtgtgaaaggtcaaccccacgatcacaaacacctg
atgccgactcagatcatccccggcacagtgctggcagatttggtgtcttccatgcactct
ctgagagaaaaacacaacatcaagtcccactgtccctgcagcaccaagcagaacctgctc
accaaactgccagccactaacggagtctcacaggttctgcagaacgtcctgaaccacagt
aacaaactgtctgtgctcaagactgagctgtgctctcagcagaactccgaccaaggaggg
acaaaggtggagactaacggagggggggggggaagcagtccaagcagcgatgcaggaagt
gctcctgtcaccccgcccgagtcccagtcccctctgcacttcctggctgatctggcagag
cagaagtccagggaggagaagaaagaaaacaagtctgtggtgctgggtaaatcagtgaag
gaggacaaggtgggggacagcctggagttgctgcagcagtgtaagaccacctccctggta
gccaacagtacggagcagggctccaccctcagagacctgctcaccaccacagcagggaag
ctgaagatgggctccacagacgctgggatcgccttcgcaccagtctactgcaacgctgca
cagcatggaaaaggtgggaggaccatgcctaacatccttgatgaaatcattgcttcagtg
gttgaaaataaaatcccggccaaccgccagaacatcgccagcaaactgtcaatcatcaag
catgagcctgtcacccctagcaacaacaacaaccccgcccctgctatcactgaggatgtt
aaaccagacaggaagaagacagctgcggcggtgtcagaagaatcaaccaatcagtatcca
gatattcctcactgctggttaaacaacaggcggctgctgtggctcaaagatcaccgcaac
cacaacaactggaagctgttcagagagtgctggagacaaggacagcctgtcctggtgtca
gggatccacaagcgactgaacagcgccctgtggaaagccgactccttcaaccaggagttt
gctgaccatcagggagacctgctcaactgtaaggaccaggtggtgtccaactctgggatc
aaggagttctgggatggattcgaggacatcaccaagcggcccaagtcaaaggacggagag
cccatggtgtacaggctgaaggactggccctctggagaggagttcatggccctcatgccc
tccagatatgatgacctgatgaagaacctgcctctgccagagtactctgatccagagggc
aacctgaacctggcctcccacctgccctctttctttgtccggcctgatctggggcccagg
ctctgctgtgcctacggcgtagctgcgtctcaggaccaggactttgggaccgctaacctc
catgtggaagtctcagatgtggtctcggttctggtctacgtaggagtcgctaaaggcaac
ggagtcctgtcaaaaactggagtgttgaagcgtctggaggaggaggatctggatgaaggg
gtgcgcaggaggctcaaagactccagtgagactccgggggctctgtggcatatctacctc
aaaaagacatga
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integrated database retrieval system
