Notothenia coriiceps (black rockcod): 104965354
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Entry
104965354 CDS
T04920
Name
(RefSeq) uncharacterized protein LOC104965354
KO
K12494
PH and SEC7 domain-containing protein
Organism
ncc
Notothenia coriiceps (black rockcod)
Pathway
ncc04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
ncc00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
104965354
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ncc04131
]
104965354
Membrane trafficking [BR:
ncc04131
]
Endocytosis
Arf GTPases and associated proteins
Arf associated proteins
104965354
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sec7
CCD97-like_C
Motif
Other DBs
NCBI-GeneID:
104965354
NCBI-ProteinID:
XP_010792611
UniProt:
A0A6I9Q3Q4
LinkDB
All DBs
Position
Unknown
AA seq
1307 aa
AA seq
DB search
MSQSGKVLNLYVEVRSAPDQAGGKEGIAQGHSVQDSPNELLSQLSSQTSVTKTSTAQRLL
QDCKHNQSPYRNVQLQQASSSPTVSKRWSAPCDEASAFRSPQMMSSSGKVNAPHTPPNCQ
RFNEGKVSDGTRSVVTFSYIEKSNVNSPCKRGTIEERSTPSHFRKRLSDPIWFGSPNSSC
SSSPKQTFRSPGSHQQTFSPGLRQSALDPIGRAATQRAVEEFGSPLLRIKLAHALEQAAS
SRYNQQPRCQSWAGSPVQRQNMGVLKDHFTERSQAVCGLPRSPASDQLSSKSRQSSNVKP
ESFGESQNPLHWSAEDRTVVRSPATKINVHRSCNRSTSPQAAILQLGNNVVEGLNQLSDS
KPSSPAHSPEVARRLTEEATKVSSIFTEARKSSLHNALGEPVGELQHSAPNAQLKQTLKM
NIPLNDQQTPATDNTDSHQPENSLSQSILHSHETNSSTNHQTHQEDFIQKSHPQSSILSS
PAIPSRVLRPSHPPTEFSSPIRDPRLFQAELRAPDTPTLHRRQLPRYTGDSWSPSFDKRG
DLSCFDRGDCTELARRLFINQSVEEAPVSWTSRQQWGNEVENSPMPSPVAGLGCIDDQTP
DCPSGHHRRPLSPTAQQKRAEQRRREILLLGPVALDSPEEDEGCDEEGQGNEMEGFEAEQ
QGVGEAPEAEQNGAMGGSSSRSSSGVTGSLGDRDCVSPESSQSSHQSNETGAATSGIQTD
SGCALPVPSLHCQRIARAKWEFLFGTPAEEAASRGEKNSLEASTAPPSGNSSESPTPTPP
SSLPLLSANHNVQQVEVELVTPPPAVIGTSPKTGIIRRTLKYSETDLDAVPLRCYRETDI
DEVLLAELDDADSAFGSNRSVQGISGTGSSPLGGLTYGRTDGEVTEKRRGEGEEDEEEEE
EEEEEEEEEEDEEEMVSWASVRMQGDNRKQQHAAQEDPEVFGHIMKRPMATFFDNHHPAL
KSPILVSGPRCAAEDTFSRHFESIMESHRAKGTSYNSLDSEELLTSSTQTVLTFDLPTLT
PAIHGPVCQSTRQIVQLSFAPLAHDERPSISDSIFTMTGDSDATRAPSSERLSSGSDDTP
PKGRGYSQLGSSWYSNPSFSLPSRDKARLATDSELDQDLSERLGLGSSETLTNGSHRADV
AAARRLAKRLFNLDGFRKSDVARHLSKNNDFSRMVAEEYLSFFDFAGLAIDQALRTFLRQ
FALMGETQERERVLAHFSKRYLDCNPKVIPSEDAVHTLTCAIMLLNTDLHGQNIGKRMSC
TQFISNLEGLNDGQDFHKDLLKLAFTTSPEASNQKPACTQHFLVYSS
NT seq
3924 nt
NT seq
+upstream
nt +downstream
nt
atgtcccagtctggaaaagtacttaatttgtatgtagaggtgaggtctgccccagatcag
gcaggagggaaggaagggattgctcaggggcattcggttcaggacagtccaaatgagctc
ctgtctcagctatcaagccagacctccgtcactaagacctccacagctcagcgtctcctt
caagactgcaaacataaccagtctccttatagaaacgtccagctccagcaagccagcagc
tcccctacagtgtccaagcgttggagtgcaccgtgtgatgaagcgtctgcctttcgctcg
ccacaaatgatgtcctcttcgggaaaggttaacgcccctcacactcctcccaactgccag
aggttcaacgaggggaaggtcagtgatggtacgcgctctgtggttacctttagttacatt
gagaagtccaacgtgaacagtccatgcaaaagaggtactatagaggaaagatccacccct
tctcactttcgtaaaagactcagcgacccaatttggtttgggagtcccaattcatcgtgc
agctccagtcccaagcagactttccgatctccaggaagtcaccagcagacgttctctcct
ggactccgccaatcagctttggatcccatcggtagggcagctacccagagggctgtggag
gagtttggctcccctctgttgaggattaagctggctcatgcacttgagcaggccgcatcg
tcacgctataaccaacagccgcgctgtcagtcctgggctgggtctcctgtccagcgtcag
aacatgggtgtcctcaaagaccacttcacggagaggagccaggctgtttgtgggctgcct
cggagccctgcgtcagaccagctatcctccaagtccaggcagtcatctaacgtgaagcct
gagtctttcggtgagtcccagaaccctcttcactggtctgcagaggacagaactgtagtc
cgaagtccagccacgaaaataaatgtccaccgatcttgcaacagaagcacttcgccgcag
gcagcaatcctccaacttggcaataatgtagttgagggcttgaatcaattaagtgacagt
aaaccctcctctccggctcatagccctgaggtagcccggaggctaacagaggaggctacc
aaagtatcttctattttcacagaggcacgaaagtcctcattgcacaacgctttaggagag
cccgttggagaacttcaacattcagcaccaaatgcacaactcaaacaaacgcttaagatg
aacatccctttaaatgaccaacaaacaccagcaactgacaacacagactctcaccagccg
gaaaactctctctctcaatctatcttgcactcgcacgaaaccaactccagtactaatcat
caaacacaccaggaggacttcattcagaagtcccaccctcagagctcgattttaagttcc
cctgccataccttcgcgagttttacgtccttctcatcctccaactgagttcagctctccc
ataagggaccccaggctattccaagcagaactccgagcaccggatacccccaccctacat
cgccggcagctcccgaggtacaccggagactcctggtcccctagcttcgataagagagga
gacctgagctgtttcgacagaggggactgcactgagctcgctaggaggctattcatcaat
cagagtgttgaggaggcaccagttagctggacgtccaggcaacagtgggggaatgaggtg
gagaacagcccgatgccgagccctgtggctggtctagggtgcatcgatgaccaaactcct
gattgtccatctggtcaccatcgcagaccgctcagtccgacagcacagcagaaacgagca
gagcagaggaggagagagatcctgcttctgggccctgtagcgttggactctccagaggag
gatgagggttgtgatgaggagggacagggcaatgagatggagggatttgaggctgagcag
cagggggtaggggaggctccagaggcagagcagaacggagccatgggaggttcgtcctcg
cggagctccagcggggtgacaggaagcctgggagacagagactgtgtgtcccctgagtct
agtcagtccagtcaccagagcaacgagaccggggccgccacctcaggaatacagacggac
agtggctgtgcattgcctgtgccctcgctccattgtcaaaggatcgctcgtgccaagtgg
gagtttttatttgggacccctgctgaggaggctgctagtaggggagagaaaaattctctg
gaagcctccacagctcctcccagtggtaactccagcgagtctcccacaccaactccccct
tcctccctccctctgctttctgccaatcacaatgtacaacaagttgaggtagagctggtg
acccctcctccagctgtcatcgggacttcccccaaaactggcattattcgccggacctta
aagtactcagaaactgaccttgatgcagttccccttcgctgctaccgagagacggacata
gacgaggtgctgctggcggagctggacgacgccgactctgcgtttgggagtaaccgcagc
gtccagggcatctcgggtacaggcagcagcccactggggggtctgacttatggtaggaca
gatggggaggtcacagagaagagaaggggagagggtgaggaggatgaggaagaagaggag
gaggaggaggaggaggaggaggaagaagaagacgaggaagaaatggtgagctgggccagt
gtgaggatgcaaggagacaacaggaagcagcagcatgcagctcaggaggacccagaggtg
tttggtcacattatgaagagaccaatggcaacattttttgacaaccaccacccggccctg
aaatcccccatcttggtctccggccctcgctgtgctgcagaggacaccttcagccgccac
tttgagagcatcatggagtctcaccgagccaaaggcacctcgtacaacagcctggatagc
gaggagctgcttacctcgagcacccaaaccgtcctgacctttgacctgcccacattaacc
cctgccatccacggtccggtctgccagagcaccaggcagatcgtccagctcagcttcgcc
ccactggcacacgatgagaggcccagtatctccgattcaatctttaccatgactggggac
tcggacgccaccagagccccgtccagcgagaggctgagcagcggttcggacgacacgcca
cccaaaggacgagggtattcacagctggggagcagctggtacagcaacccttctttctca
ttaccaagcagggacaaggcccgtctggcgacagattcggagctggaccaggacctcagt
gagcggctgggtctgggcagcagtgagaccctcaccaatggcagccaccgtgctgacgtg
gcagccgccaggcgcctggccaaacgtctcttcaacttggacggcttcaggaagtccgat
gtggcgcggcacctcagcaagaataatgacttcagccgaatggttgcagaagagtatctg
agcttcttcgactttgcgggcctcgctattgaccaggcattgcggactttcctccggcag
tttgccctgatgggggagactcaggagagggagagggtgctggcacacttttctaagcgt
tatttggactgcaacccaaaagtcataccatcagaggatgcagttcacactctcacctgc
gccatcatgctgctgaacactgatctacatggtcagaacatcggtaagaggatgtcgtgc
acgcagttcatcagcaacctggagggactgaacgacggccaagattttcacaaggatctg
cttaaactggctttcaccacatctccagaggcctccaatcagaagcctgcctgcacccaa
cacttcctggtatactccagctga
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