Notothenia coriiceps (black rockcod): 104965394
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Entry
104965394 CDS
T04920
Name
(RefSeq) RNA binding protein fox-1 homolog 1-like
KO
K14946
RNA binding protein fox-1
Organism
ncc
Notothenia coriiceps (black rockcod)
Brite
KEGG Orthology (KO) [BR:
ncc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ncc03041
]
104965394
Spliceosome [BR:
ncc03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
104965394
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Fox-1_C
PRKCSH_1
RRM_1
PRKCSH
RRM_5
Motif
Other DBs
NCBI-GeneID:
104965394
NCBI-ProteinID:
XP_010792651
UniProt:
A0A6I9Q3R2
LinkDB
All DBs
Position
Unknown
AA seq
417 aa
AA seq
DB search
MFVDERLHFRRVCLTFQEGHRPLSPLQGKTEEVSQGEAGVQCGSGDSGGSVGDPSEAKGT
PKRLHVSNIPFRFRDPDLRQMFGQYGKILDVEIIFNERGSKGFGFVTFETGVDAERAREK
LHGTLVEGRKIEVNNATARVMTNKKMVSPFPNGEAALSALPYGNAGWKLSPMMGAMYAPE
IYAVPGFPYSSAAAAATTAAAAFRGAHLRGRGRPVYSAVRAAVPQPAMPTYPGVVYQDGF
YGAADLYVRCPAAAAVVISPLSAEREASSLKKVEEAYDTINMEISDLRTKLAIDYGPDWE
FLFLNSQCYQLNVYEYTYNLCPFNQVTQKSTAGTEVSLGRWGMWAGTPKNPYSQMVYENG
EPCWQGGSRSTTVTLTCGTETALCGVKEPSKCQYIIDFQTPVACQPVLKQRGVHSEL
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgttcgtggatgagcgtctgcacttccgccgtgtctgcctcactttccaggagggtcac
cgccctctctcccccctacagggtaagacggaggaggtgtctcagggtgaggcgggggtg
cagtgtggatcaggagattcaggcggatctgtgggagacccctcggaggccaaagggacc
cccaaacgcctccacgtctcaaacatccctttccgcttccgggaccccgacctcaggcag
atgtttgggcaatacgggaagattctggatgtagagattattttcaatgagaggggctca
aagggtttcggcttcgtgacgtttgagaccggcgtggacgcagagagagcccgggaaaag
ctccacggcacgttggtggaaggtcgtaagattgaggtgaacaatgccacagcccgggtg
atgaccaacaagaaaatggtcagcccgtttcctaatggagaggcggccctcagcgcgctg
ccctacggtaacgcggggtggaaattgagtcctatgatgggagccatgtacgcacctgag
atctacgcagtcccagggttcccctactcttcagcagcggcagcagccaccacagcagca
gcagcgtttcgcggggctcacctgagaggccgcggccgacccgtctacagcgctgtgcga
gccgccgtgcctcaaccggccatgcctacataccctggtgtggtgtatcaggatgggttt
tacggcgctgcagacttatatgtaaggtgtcctgctgctgctgcggttgttatctcacca
ctgtctgcagagcgggaggcgtccagtctgaagaaggtggaggaggcgtatgacaccatc
aacatggagatcagtgatcttcggacgaagctggccatagactacggtccagactgggag
ttcctgtttctgaacagccagtgttaccagcttaacgtttatgagtacacctacaatctg
tgcccgttcaatcaggtcactcagaagagcaccgcggggaccgaggtctcgttagggagg
tgggggatgtgggcggggactccgaagaacccgtacagtcagatggtgtatgagaacgga
gaaccctgctggcaaggaggctcccgcagtactacagtcacactgacatgcggcacagag
acagcgctgtgcggggtgaaggagcctagcaaatgccagtacatcatagacttccagact
cctgtggcctgtcagccggtgctgaagcagcggggcgtccacagtgaactgtga
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