Notothenia coriiceps (black rockcod): 104965425
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Entry
104965425 CDS
T04920
Name
(RefSeq) cytoplasmic FMR1-interacting protein 1 homolog
KO
K05749
cytoplasmic FMR1 interacting protein
Organism
ncc
Notothenia coriiceps (black rockcod)
Pathway
ncc04810
Regulation of actin cytoskeleton
ncc05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
ncc00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
104965425
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
104965425
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ncc03019
]
104965425
Messenger RNA biogenesis [BR:
ncc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
104965425
Factors involved in mRNA localization
Other mRNA localization factors
104965425
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FragX_IP
CYRIA-B_Rac1-bd
Cypovirus_WIV_4
Motif
Other DBs
NCBI-GeneID:
104965425
NCBI-ProteinID:
XP_010792683
UniProt:
A0A6I9PYH7
LinkDB
All DBs
Position
Unknown
AA seq
999 aa
AA seq
DB search
MTTTVTLEDALSNVDLLEELPLPDQQPCIEPLPASIMFQPNFNTNFEDRNAFVTGIARYI
EQATVHSSMNVMLEEGEGYAIMLYTWRSCSRAIPQVKCNEQPNRVEIYEKTVEVLEPEVT
KLMNFMYFQRTAIDRFCGEVRRLCHQERRKDFVSEAYLLTLGKFINMFAVLDELKNMKCS
VKNDHSAYKRAAQFLRKMSEPSSIQESQNLSMFLANHNKITQIVLTLRLDDRVDEEDEGD
VFPRGRVMKRSRSTLIFLTQDLRALPHQVLQQRHSVFSQHIFTYIPSLLRLQVMGFGLYL
MDGNSSNIYKLDAKKRINLTKIDKFFKQLQVVPLFGDMQIELSRYIKTSAHFEENKSRWT
CTSISSSPQYNICEQMIQIREDHMRFISELARYSNSEVVTGSGRQESQKTDSEYSKLFDL
SLQGIQLLSQWSGHVMEVYSWKLVHPTDKYSNKECPDNAEEYERATRYNYSCEEKFALVE
VMAMIKGLQVLMGRMESVFNHAIRHTIYSMLQDFSQVTLREPLRHAIKKKKNVIQSVLQA
IRKTVCDWEAGREPHNDPALRGEKDPKGGFDIKVPRRAVGPSSTQLYMVRTMLESLIADK
SGSKKTLRSGLDGPTILDIERFHRESFFFTHLLNFSETLQMCCDLSQLWFREFFLELTMG
RRIQFPIEMSMPWILTDHILETKEASMMEYVLYPLDLYNDSANYALTKFKKQFLYDEIEA
EVNLCFDQFVYKLADQIFAYYKILAGSLLLDKRLRSDCKNQGANIPWPASNRYETLLKQR
HVQLLGRSIDLNRLITQRISAALYKSLELAINRFESEDLTSIMELEGLLDINRMTHKLLS
KFLTLDSMDAMFREANHNVSAPYGRITLHVFWELNYDFLPNYCYNGSTNRFVRTVLPFSQ
EFQRDKPPNAQPQYLYGSKTLNLAYSSIFSTYRNFVGPPHIKVMCRLLGYQGIAVVMEEL
LKVVKSLLQGTIMQYVKTLMEVMPKICRLPRHEYGSPGL
NT seq
3000 nt
NT seq
+upstream
nt +downstream
nt
atgacgaccacggtgactctggaggatgctctctccaacgtggatctgctggaggagctg
ccgctgccggaccagcagccctgcatcgagccgctgccggcatccatcatgttccagccg
aacttcaacaccaactttgaggatcggaatgcgttcgtcaccggcatcgcccgatacatc
gagcaggccaccgttcactccagcatgaacgtgatgctggaggagggggaggggtacgcc
atcatgctgtacacctggaggagctgctctcgagccatccctcaggtgaaatgcaacgag
cagccgaacagggtggagatctacgagaagacggtggaggtgctggagcccgaggtcacc
aagctgatgaacttcatgtacttccagcgcacggccatcgatcgtttctgcggagaggtg
cggcgcctctgccaccaggagcgcaggaaggactttgtctccgaggcgtacctgctgacg
ctcgggaagttcatcaacatgttcgccgtgctcgacgagctgaagaacatgaagtgcagc
gtgaagaacgaccactccgcctacaaacgagctgctcagttcctcagaaagatgtctgag
ccttcctccatccaggagtctcagaacctgtccatgttcctggcaaaccacaacaaaatc
actcagattgttctcaccctgcgcctcgatgacagagttgatgaagaggatgagggggat
gtgttcccccgcggccgcgtgatgaagaggagtcgctccacactcatctttctcactcag
gacctcagggctcttcctcaccaggttctccagcagcgacattcagtattttcccaacac
atatttacctatatcccctctctgctccgcctccaggtgatggggttcggtctgtacctg
atggacggaaacagcagcaacatctacaaactggacgccaagaagaggatcaacctgacc
aagatcgacaagttcttcaagcaacttcaggtggtgcctctattcggggacatgcagatc
gagttgtcccgctacatcaagaccagcgctcactttgaggagaacaaatccaggtggacg
tgcacgtctatctccagcagccctcagtacaacatctgtgagcagatgatccagatcaga
gaggatcacatgcgcttcatctcagagctcgcccgctacagcaacagcgaggtggtgacg
ggctcggggcgtcaggagtcccagaagacggactctgagtacagtaagctgttcgacctg
tctctgcagggcatccagctgctgtcccagtggagcgggcacgtcatggaagtgtactcc
tggaagctcgtccatcccaccgataaatactccaacaaggagtgtcccgacaacgcagag
gagtacgagagagccacgaggtacaactacagctgcgaggagaagttcgctctggtggag
gtgatggcgatgatcaagggtctgcaggtgctgatgggccggatggagagtgtgttcaat
cacgccatccgacacaccatctactccatgctgcaggacttctctcaggtgacgctgcga
gagccgctgcggcatgccatcaagaagaagaagaacgtcatccagagcgtcctgcaggcc
atcaggaagacggtgtgtgactgggaggcgggccgcgagccgcacaacgacccggctctg
cgcggagagaaagatccaaagggaggcttcgacatcaaggtcccccgcagagcagtgggc
ccctccagcacccagctctacatggtgaggactatgctggagtctctgatcgcggataaa
agcggctccaagaagacgctgcgcagcgggctggatggccccaccatcctggacatcgag
aggttccaccgcgagtcgttcttcttcacacacctgctcaacttcagcgagacccttcag
atgtgctgcgatctctcccagctctggttcagggagttcttcctggagctcaccatgggc
cgcaggatccagttccccatcgagatgtccatgccctggatcctcaccgaccacatcctg
gagaccaaggaggcgtccatgatggagtatgtgctgtatcctctggatctgtacaacgac
agcgccaactacgctctgaccaaattcaagaagcagttcctctacgacgaaatcgaggcc
gaggtgaacctgtgcttcgatcagttcgtctacaaactggctgatcagatatttgcgtac
tacaagatcctagcaggaagtctcctgctggacaaacgtctgaggtccgactgtaagaac
cagggagcgaacatcccctggccggcctccaaccgctacgagacgcttctgaagcaacgc
cacgtccagctcctcggccgctccattgatctgaacagactgatcactcagaggatctcc
gccgctctctacaaatctctggagctcgccatcaaccgcttcgagagcgaggacctcacc
tccatcatggagctggaaggtctcctggacatcaaccgcatgacgcacaagctgctcagt
aagttcctgactctggacagcatggacgccatgttccgcgaggccaaccacaacgtgtcg
gcgccgtacggacgcatcacgctgcacgtcttctgggagctcaactacgacttcctgccc
aactactgctacaacggatccaccaacaggttcgtgcgcaccgtgctgccgttctctcag
gagtttcagagggacaagccgcccaacgctcagcctcagtacctgtacggctccaagacc
ttgaatctggcgtacagcagcatcttcagcacttacaggaactttgtgggccccccccac
attaaggtgatgtgcaggctgctgggctaccagggcatcgccgtggtgatggaggagctg
ctgaaggtggtgaagagcctgctgcagggcaccatcatgcagtatgtgaagactctgatg
gaggtgatgcccaagatctgcagactcccccgccacgagtacggatccccagggctgtaa
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