Notothenia coriiceps (black rockcod): 104965507
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Entry
104965507 CDS
T04920
Name
(RefSeq) toll-like receptor 13
KO
K18808
toll-like receptor 13
Organism
ncc
Notothenia coriiceps (black rockcod)
Brite
KEGG Orthology (KO) [BR:
ncc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
ncc04054
]
104965507
Pattern recognition receptors [BR:
ncc04054
]
Membrane-bound pattern recognition receptors
Toll-like receptors
104965507
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SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_4
TIR
TIR_2
LRR_14
LRR_9
LRR_1
LRR_5
LRR_NXF1-5
LRR_LRWD1
LRR_Zer-1
LRR_At5g56370
ThsB_TIR
Motif
Other DBs
NCBI-GeneID:
104965507
NCBI-ProteinID:
XP_010792762
UniProt:
A0A6I9PX01
LinkDB
All DBs
Position
Unknown
AA seq
659 aa
AA seq
DB search
MEELIHKGILATVCRIPTLKKLDLDFNHVPNLSSQLVDCRHLSELDLSHTFMRELPKDKI
RFMKQLRFLILEWNRLTKVPDDIQSLSSLKILNLGKNFISDLSCNDFINTTGLRELYLDS
NRIVKLNGCVFENLNELNILDLSDNLLWTLGGVFKEGLPRLEFLDLSSNNLITLENEDFQ
ALGSLTFLNVVSTHIGRVKRRTFLGLNNLRNLTLSIPLDYETHFRGTVQLERLTINLFID
GSFKSPLPSHHDAFYQLKCLKVLTIKCKGYHFGFPLDIPLEMLQSMKHLEEFTAENVYIQ
ALDPETFQFNPQLKSLTIGMTDLSDLLPELFEPIPNLQVLDLSESQIKSLDFLTHVNLPA
LRCLKLRDNDITVINETIFQYLPALTHLYLENNPFTCDCSNAGFIQWVRSNTQTQVVNSH
QYTCSFPVAEQGSKLLDFDIQSCWMDVSFLCFISSSCITLVTLLTSFIYHFLRWQIAYTF
HLFLAFLYESRRRKKGAPLQYDAFISYNIHDEAWICREMLPVLEGEQGWKLCLHHRDFQP
GKPIIENITDAIYGSRKTICVITRRYLQSEWCSREIQMASFRLLDEQKDVLILIFLEDIP
AHQLSPYYRMRKLLKKRSYLSWPQAGQHTGVFWQNVRRALEAGSAATETTHLLTGPAAR
NT seq
1980 nt
NT seq
+upstream
nt +downstream
nt
atggaggaattgatccacaaaggtattttagctactgtttgcagaataccaacacttaaa
aagctagatctagatttcaaccacgtccccaatttaagctcacaacttgtagattgccgc
cacctcagtgagcttgatctatctcatactttcatgagggaactgcctaaggacaagata
cgatttatgaagcaactgaggtttttaattctagagtggaaccgccttaccaaagtgcct
gatgatattcagagtctctcctccctcaaaatcctcaatcttggaaagaatttcatttct
gatttgagctgtaacgatttcataaacacaacaggcctcagagagctttatctggattcc
aaccgcattgtcaaattgaacggatgtgtctttgaaaatcttaatgaactgaatatttta
gatttaagtgacaacctgctgtggacattgggaggtgtcttcaaagaaggtctgccgagg
cttgagttcctggatttgagcagcaacaatttgattactcttgaaaatgaggattttcaa
gctttaggatccttaacatttttaaatgtagtgtcaactcatattggtagggtgaaacgt
aggacttttctcggactgaacaacttaagaaacctgactttatctattccccttgactat
gaaactcatttcagaggaacagtgcagttggaacgtcttacaatcaacctctttatcgac
ggcagtttcaaaagtcctcttccaagccatcatgacgctttctaccagttaaaatgttta
aaagttcttactataaaatgcaaaggttatcactttggcttcccccttgacataccgttg
gaaatgctccagtctatgaaacatttagaggaatttacagctgagaacgtctacatccag
gccctagacccagaaacattccaattcaatccccagctcaagagtcttaccatcggaatg
actgacttgtcagatttgcttcctgaactgtttgagccaataccaaaccttcaggttctc
gatctctctgagagtcagatcaagtctttggattttttgacccatgtaaacctgcctgca
cttagatgtttgaaactgagggacaatgacattacagtgatcaacgagacgatcttccag
tacctccctgcactaacacacctgtacctggaaaacaatcctttcacctgtgactgctct
aacgccggctttattcaatgggtgaggagcaacacccaaacacaggttgttaatagccat
cagtatacgtgttcctttcctgtggctgaacagggaagcaagttgctggactttgacatc
cagtcctgttggatggacgtgagcttcctctgcttcatttccagcagttgcataactttg
gtgacactcctcacatcgttcatctaccactttctgaggtggcagatagcttacaccttc
cacctcttcctcgcattcttgtatgaaagcagaaggaggaagaagggagctcctcttcaa
tacgacgccttcatttcctacaacattcacgacgaggcctggatttgcagagagatgctg
ccggtgctggaaggagagcagggctggaaactgtgtctgcaccacagagacttccaacca
gggaagccgatcatagagaacattacagacgccatctatggcagcaggaagaccatctgt
gtgatcaccaggcgctacctgcagagcgagtggtgctccagagagatccagatggccagc
ttccgtctgttggacgagcagaaggacgtgctgattctaattttccttgaggacatcccg
gcccaccagctgtctccatactaccgaatgagaaagctgctgaagaaacgcagctacctg
agctggccgcaggccggacaacacaccggagtcttctggcagaacgtgaggagagctctg
gaggcggggagcgctgccactgagaccacccacctgctcactggaccagcagcacgctga
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