KEGG   Notothenia coriiceps (black rockcod): 104965623
Entry
104965623         CDS       T04920                                 
Symbol
rrp9
Name
(RefSeq) U3 small nucleolar RNA-interacting protein 2
  KO
K14793  ribosomal RNA-processing protein 9
Organism
ncc  Notothenia coriiceps (black rockcod)
Brite
KEGG Orthology (KO) [BR:ncc00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:ncc03009]
    104965623 (rrp9)
Ribosome biogenesis [BR:ncc03009]
 Eukaryotic type
  90S particles
   Other 90S particles
    104965623 (rrp9)
SSDB
Motif
Pfam: WD40 WD40_Prp19 Beta-prop_TEP1_2nd WD40_WDHD1_1st Beta-prop_EML_2 WD40_CDC20-Fz EIF3I WDR55 Beta-prop_EML Beta-prop_CAF1B_HIR1 WD40_MABP1-WDR62_2nd Beta-prop_TEP1_C Beta-prop_WDR90_POC16_2nd Beta-prop_WDR75_1st Beta-prop_IFT122_1st NBCH_WD40 WD40_MABP1-WDR62_1st Beta-prop_SCAP Beta-prop_DCAF12 Beta-prop_IP5PC_F Beta-prop_SPT8 WDR90_beta-prop_4th Beta-prop_IFT140_1st Beta-prop_HPS5 Beta-prop_Vps41 Beta-prop_WDR75_2nd PEP5_VPS11_N Beta-prop_NWD2_C Beta-prop_WDR19_1st Beta-prop_RIG_1st WDR54 DUF7099
Other DBs
NCBI-GeneID: 104965623
NCBI-ProteinID: XP_010792915
UniProt: A0A6I9PY73
LinkDB
Position
Unknown
AA seq 483 aa
MSSPFFIKAKVNPKFAKKGKPATVLKRKGDGDPGGKGKPRAKKLISKHNEEISSDSETES
PIVARKRQTIERDDYDETPQEKKLRLAKLYLNQLKEEEDDKAEDDAFETDLVAGRLQEEV
LEQKGKLQRLIAKDIMAPDASEIRVLRGHKLPITCLVISSDDKYIFSAAKDCSIIKWDFE
SGKKLHTIHGGRKGTEDRHVGHTAHILCMAISSDGKYLATGDVNKLIMIWEANTCKHLYK
FTGHKGPVSGLSFRRGTHDLYSASHDRSIKVWNVDENAYVETLFGHQDAITGLDCLSREC
CVTSGGRDRSVRVWKIPEESQLVFHGHEGSIDCIQLINEEHMVSGADDGSVGLWSVNKKR
PLSTVKQAHGRHGEAGLQQAHWVSSVAALQNSDTVASGSHNSEVKLWKCGQNYRKLEPLF
SVPVCGFVNSLKFSSSGQFLVAGVGQEHRLGRWWRLKEAKNGIYIIPLKRKPTPSPEEVK
IAE
NT seq 1452 nt   +upstreamnt  +downstreamnt
atgtcttcgcctttctttataaaggcaaaagtaaaccccaaatttgccaaaaaggggaaa
cctgcaacagtgctaaaacgaaagggtgatggagacccaggaggaaagggaaaaccaaga
gccaagaaactcatctccaaacacaacgaagagatttccagcgactctgagacagagagt
cctatagtggccaggaaaagacagaccattgaaagggatgattatgatgaaacaccacag
gagaagaagcttagattagccaaactgtacctaaaccagctaaaggaagaagaggacgat
aaagcagaagatgacgcctttgagactgatctggttgctggaagacttcaagaggaagtg
ctggaacagaaaggaaagcttcagagacttattgccaaagatatcatggcaccagatgct
tcagagatcagagtgttgagaggacacaaacttccaattacctgtctggtcatcagctcg
gatgacaagtacatattttctgcggccaaagactgctccattattaaatgggattttgag
agtggaaagaaactgcacacgatacacggtggaaggaaaggcacagaggatcggcatgtt
ggacatacagcccatatcctgtgtatggccatatcatcagatgggaaatacttggccact
ggagacgtgaacaaactgatcatgatctgggaggcaaatacatgtaaacatctatataag
ttcaccggacacaaaggcccagtgtcgggtctttcattcagaaggggaactcacgatctg
tacagcgcctctcacgatcgctcaataaaggtgtggaatgtggacgagaatgcatacgtg
gaaactctctttgggcatcaggacgccatcaccggactggactgcctgagccgggagtgc
tgcgtgacgtcgggggggcgggaccgctcggtcagggtgtggaagatacccgaggaatcc
cagctggtgttccacggacacgagggatccatcgactgtatccagctcataaacgaggag
cacatggtttcgggagctgacgacggctctgtgggtctgtggagtgtcaacaagaagagg
cctctcagcacagtaaagcaggctcacggtcgccatggtgaagcggggctgcagcaggct
cattgggtctcttcggtggcggcgcttcagaactcggataccgtcgcctcaggctctcac
aactcggaggtgaagctgtggaagtgtggccagaattaccgtaaactggagcctctgttc
agtgtaccagtgtgtggttttgtcaacagtctgaagttttccagctccggtcagttcttg
gtggcaggagtcggacaggagcacaggttgggccgatggtggagattaaaagaagccaag
aatgggatctatattattcctctcaaaaggaaaccaactccaagtccagaggaagttaag
atagctgaatag

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